• 2024
  Pérot P, Tondeur L, Moutailler S, Chrétien D, Corre-Catelin N, Vayssier-Taussat M, Eloit M, Chirouze C, Cazorla C, Broad range molecular detection methods identify only Borrelia spp. in erythema migrans biopsies and blood of tick-bitten patients., One Health 2024 Dec; 19(): 100886.
• 2024
  Bratuleanu BE, Chretien D, Bigot T, Regnault B, Pérot P, Savuta G, Eloit M, Temmam S, Insights into the virome of Hyalomma marginatum in the Danube Delta: a major vector of Crimean-Congo hemorrhagic fever virus in Eastern Europe., Parasit Vectors 2024 Nov; 17(1): 482.
• 2024
  Hamelin B, Pérot P, Pichler I, Haslbauer JD, Hardy D, Hing D, Loulizi S, Regnault B, Pieters A, Heijnen I, Berkemeier C, Mancuso M, Kufner V, Willi N, Jamet A, Dheilly N, Eloit M, Recher M, Huber M, Mertz KD, Circovirus Hepatitis in Immunocompromised Patient, Switzerland., Emerg Infect Dis 2024 Oct; 30(10): 2140-2144.
• 2024
  Mathews-Martin L, Gonzalez G, Dheilly NM, Amaral-Moraes R, Dumarest M, Helle T, Migne C, Caillot C, Lacour SA, Pérelle S, Beck C, Metras R, Bournez L, Exposure of cattle to tick-borne encephalitis virus in the historical endemic zone in north-eastern France., BMC Vet Res 2024 May; 20(1): 228.
• 2024
  Momenilandi M, Lévy R, Sobrino S, Li J, Lagresle-Peyrou C, Esmaeilzadeh H, Fayand A, Le Floc'h C, Guérin A, Mina ED, Shearer D, Delmonte OM, Yatim A, Mulder K, Mancini M, Rinchai D, Denis A, Neehus AL, Balogh K, Brendle S, Rokni-Zadeh H, Changi-Ashtiani M, Seeleuthner Y, Deswarte C, Bessot B, Cremades C, Materna M, Cederholm A, Ogishi M, Philippot Q, Beganovic O, Ackermann M, Wuyts M, Khan T, Fouéré S, Herms F, Chanal J, Palterer B, Bruneau J, Molina TJ, Leclerc-Mercier S, Prétet JL, Youssefian L, Vahidnezhad H, Parvaneh N, Claeys KG, Schrijvers R, Luka M, Pérot P, Fourgeaud J, Nourrisson C, Poirier P, Jouanguy E, Boisson-Dupuis S, Bustamante J, Notarangelo LD, Christensen N, Landegren N, Abel L, Marr N, Six E, Langlais D, Waterboer T, Ginhoux F, Ma CS, Tangye SG, Meyts I, Lachmann N, Hu J, Shahrooei M, Bossuyt X, Casanova JL, Béziat V, FLT3L governs the development of partially overlapping hematopoietic lineages in humans and mice., Cell 2024 May; 187(11): 2817-2837.e31.
• 2024
  Du-Thanh A, Foulongne V, Dereure O, Eloit M, Pérot P, A quantitative assay for the assessment of cutaneous human papillomaviruses and polyomaviruses over time: A proof-of-concept in two patients with atopic dermatitis and psoriasis., PLoS One 2024 ; 19(4): e0297907.
• 2023
  Fourgeaud J, Regnault B, Ok V, Da Rocha N, Sitterlé É, Mekouar M, Faury H, Milliancourt-Seels C, Jagorel F, Chrétien D, Bigot T, Troadec É, Marques I, Serris A, Seilhean D, Neven B, Frange P, Ferroni A, Lecuit M, Nassif X, Lortholary O, Leruez-Ville M, Pérot P, Eloit M, Jamet A, Performance of clinical metagenomics in France: a prospective observational study., Lancet Microbe 2023 Dec; (): .
• 2023
  Kuhn JH, Dheilly NM, Junglen S, Paraskevopoulou S, Shi M, Di Paola N, ICTV Virus Taxonomy Profile: Jingchuvirales 2023., J Gen Virol 2023 Dec; 104(12): .
• 2023
  Pérot P, Da Rocha N, Farcet MR, Kreil TR, Eloit M, Human Circovirus is not detected in plasma pools for fractionation., Transfusion 2023 Nov; (): .
• 2023
  Julia Kende, Massimiliano Bonomi, Sarah Temmam, Philippe Pérot, Béatrice Regnault, Marc Eloit, Thomas Bigot, Virus Pop: Expanding viral databases by protein sequence simulation, International Conference on Clinical Metagenomics 2023, Nov 2023, Genève (Suisse), Switzerland.
• 2023
  Thomas Bigot, Philippe Pérot, Sarah Temmam, Béatrice Regnault, Marc Eloit, Microseek: an innovative approach to unraveling clinical metagenomic secrets, 8th International Conference on Clinical Metagenomics, Nov 2023, Geneva, Switzerland.
• 2023
  Temmam S, Tu TC, Regnault B, Bonomi M, Chrétien D, Vendramini L, Duong TN, Phong TV, Yen NT, Anh HN, Son TH, Anh PT, Amara F, Bigot T, Munier S, Thong VD, van der Werf S, Nam VS, Eloit M, Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence., Viruses 2023 Sep; 15(9): .
• 2023
  Amal Bennouna, Michael Luciano Tantely, Vololoniaina Raharinosy, Soa Fy Andriamandimby, Thomas Bigot, Delphine Chrétien, Elise Jacquemet, Stevenn Volant, Sarah Temmam, Philippe Dussart, Vincent Lacoste, Romain Girod, Marc Eloit, Comprehensive Characterization of Viral Diversity of Female Mosquitoes in Madagascar, Viruses, 2023, 15 (9), pp.1852. ⟨10.3390/v15091852⟩.
• 2023
  Mohamed Ali S, Rakotonirina A, Heng K, Jacquemet E, Volant S, Temmam S, Boyer S, Eloit M, Longitudinal Study of Viral Diversity Associated with Mosquito Species Circulating in Cambodia., Viruses 2023 Aug; 15(9): .
• 2023
  Fourgeaud J, Lecuit MM, Pérot P, Bruneau J, Regnault B, Da Rocha N, Bessaud M, Picard C, Jeziorski É, Fournier B, Levy R, Marçais A, Blanche S, Frange P, Fischer A, Cavazzana M, Ferroni A, Jamet A, Leruez-Ville M, Eloit M, Neven B, Chronic Aichi Virus Infection As a Cause of Long-Lasting Multiorgan Involvement in Patients With Primary Immune Deficiencies., Clin Infect Dis 2023 Aug; 77(4): 620-628.
• 2023
  Adjou KT, Chevillot A, Lucas P, Blanchard Y, Louifi H, Arab R, Mammeri M, Thomas M, Polack B, Karadjian G, Dheilly NM, First identification of Cryptosporidium parvum virus 1 (CSpV1) in various subtypes of Cryptosporidium parvum from diarrheic calves, lambs and goat kids from France., Vet Res 2023 Aug; 54(1): 66.
• 2023
  Niczyporuk JS, Kozdrun W, Czujkowska A, Blanchard Y, Helle M, Dheilly NM, Gonzalez G, West Nile Virus Lineage 2 in Free-Living Corvus cornix Birds in Poland., Trop Med Infect Dis 2023 Aug; 8(8): .
• 2023
  Kuhn JH, Abe J, Adkins S, Alkhovsky SV, Avšič-Županc T, Ayllón MA, Bahl J, Balkema-Buschmann A, Ballinger MJ, Kumar Baranwal V, Beer M, Bejerman N, Bergeron É, Biedenkopf N, Blair CD, Blasdell KR, Blouin AG, Bradfute SB, Briese T, Brown PA, Buchholz UJ, Buchmeier MJ, Bukreyev A, Burt F, Büttner C, Calisher CH, Cao M, Casas I, Chandran K, Charrel RN, Kumar Chaturvedi K, Chooi KM, Crane A, Dal Bó E, Carlos de la Torre J, de Souza WM, de Swart RL, Debat H, Dheilly NM, Di Paola N, Di Serio F, Dietzgen RG, Digiaro M, Drexler JF, Duprex WP, Dürrwald R, Easton AJ, Elbeaino T, Ergünay K, Feng G, Firth AE, Fooks AR, Formenty PBH, Freitas-Astúa J, Gago-Zachert S, Laura García M, García-Sastre A, Garrison AR, Gaskin TR, Gong W, Gonzalez JJ, de Bellocq J, Griffiths A, Groschup MH, Günther I, Günther S, Hammond J, Hasegawa Y, Hayashi K, Hepojoki J, Higgins CM, Hongō S, Horie M, Hughes HR, Hume AJ, Hyndman TH, Ikeda K, Jiāng D, Jonson GB, Junglen S, Klempa B, Klingström J, Kondō H, Koonin EV, Krupovic M, Kubota K, Kurath G, Laenen L, Lambert AJ, Lǐ J, Li JM, Liu R, Lukashevich IS, MacDiarmid RM, Maes P, Marklewitz M, Marshall SH, Marzano SL, McCauley JW, Mirazimi A, Mühlberger E, Nabeshima T, Naidu R, Natsuaki T, Navarro B, Navarro JA, Neriya Y, Netesov SV, Neumann G, Nowotny N, Nunes MRT, Ochoa-Corona FM, Okada T, Palacios G, Pallás V, Papa A, Paraskevopoulou S, Parrish CR, Pauvolid-Corrêa A, Pawęska JT, Pérez DR, Pfaff F, Plemper RK, Postler TS, Rabbidge LO, Radoshitzky SR, Ramos-González PL, Rehanek M, Resende RO, Reyes CA, Rodrigues TCS, Romanowski V, Rubbenstroth D, Rubino L, Runstadler JA, Sabanadzovic S, Sadiq S, Salvato MS, Sasaya T, Schwemmle M, Sharpe SR, Shi M, Shimomoto Y, Kavi Sidharthan V, Sironi M, Smither S, Song JW, Spann KM, Spengler JR, Stenglein MD, Takada A, Takeyama S, Tatara A, Tesh RB, Thornburg NJ, Tian X, Tischler ND, Tomitaka Y, Tomonaga K, Tordo N, Tu C, Turina M, Tzanetakis IE, Maria Vaira A, van den Hoogen B, Vanmechelen B, Vasilakis N, Verbeek M, von Bargen S, Wada J, Wahl V, Walker PJ, Waltzek TB, Whitfield AE, Wolf YI, Xia H, Xylogianni E, Yanagisawa H, Yano K, Ye G, Yuan Z, Zerbini FM, Zhang G, Zhang S, Zhang YZ, Zhao L, Økland AL, Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota), J Gen Virol 2023 Aug; 104(8): .
• 2023
  Beurdeley-Fehlbaum P, Pennington M, Hégerlé N, Albert M, Bennett A, Cheval J, Clark A, Cruveiller S, Desbrousses C, Frederick J, Gros E, Hunter K, Jaber T, Gaiser M, Jouffroy O, Lamamy A, Melkowski M, Moro J, Niksa P, Pillai S, Eloit M, Ruppach H, Evaluation of a viral transcriptome Next Generation Sequencing assay as an alternative to animal assays for viral safety testing of cell substrates., Vaccine 2023 Jul; (): .
• 2023
  Riller Q, Fourgeaud J, Bruneau J, De Ravin SS, Smith G, Fusaro M, Meriem S, Magerus A, Luka M, Abdessalem G, Lhermitte L, Jamet A, Six E, Magnani A, Castelle M, Lévy R, Lecuit MM, Fournier B, Winter S, Semeraro M, Pinto G, Abid H, Mahlaoui N, Cheikh N, Florkin B, Frange P, Jeziorski E, Suarez F, Sarrot-Reynauld F, Nouar D, Debray D, Lacaille F, Picard C, Pérot P, Regnault B, Da Rocha N, de Cevins C, Delage L, Pérot BP, Vinit A, Carbone F, Brunaud C, Marchais M, Stolzenberg MC, Asnafi V, Molina T, Rieux-Laucat F, Notarangelo LD, Pittaluga S, Jais JP, Moshous D, Blanche S, Malech H, Eloit M, Cavazzana M, Fischer A, Ménager MM, Neven B, Late-onset enteric virus infection associated with hepatitis (EVAH) in transplanted SCID patients., J Allergy Clin Immunol 2023 Jun; 151(6): 1634-1645.
• 2023
  Avramescu M, Isnard P, Temmam S, Chevalier A, Bastard P, Attia M, Berthaud R, Fila M, Dossier C, Hogan J, Ulinski T, Leguevaques D, Louillet F, Casado EM, Halimi JM, Cloarec S, Zaloszyc A, Faudeux C, Rousset-Rouvière C, Clavé S, Harambat J, Rollot E, Simon T, Nallet-Amate M, Ranchin B, Bacchetta J, Porcheret F, Bernard J, Ryckewaert A, Jamet A, Fourgeaud J, Da Rocha N, Pérot P, Kuperwasser N, Bouazza N, Rabant M, Duong Van Huyen JP, Robert MP, Zuber J, Casanova JL, Eloit M, Sermet-Gaudelus I, Boyer O, Acute tubulointerstitial nephritis with or without uveitis: a novel form of post-acute COVID-19 syndrome in children., Kidney Int 2023 Jun; 103(6): 1193-1198.
• 2023
  Salloum PM, Jorge F, Dheilly NM, Poulin R, Adoption of alternative life cycles in a parasitic trematode is linked to microbiome differences., Biol Lett 2023 Jun; 19(6): 20230091.
• 2023
  Julia Kende, Massimiliano Bonomi, Sarah Temmam, Béatrice Regnault, Philippe Pérot, Marc Eloit, Thomas Bigot, Virus Pop—Expanding Viral Databases by Protein Sequence Simulation, Viruses, 2023, 15 (6), pp.1227. ⟨10.3390/v15061227⟩.
• 2023
  Sarah Temmam, Xavier Montagutelli, Cécile Herate, Flora Donati, Béatrice Regnault, Mikael Attia, Eduard Baquero Salazar, Delphine Chretien, Laurine Conquet, Grégory Jouvion, Juliana Pipoli da Fonseca, Thomas Cokelaer, Faustine Amara, Francis Relouzat, Thibaut Naninck, Julien Lemaitre, Nathalie Derreudre-Bosquet, Quentin Pascal, Massimiliano Bonomi, Thomas Bigot, Sandie Munier, Felix Rey, Roger Le Grand, Sylvie van der Werf, Marc Eloit, SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19, EMBO Reports, 2023, 24 (4), pp.e56055. ⟨10.15252/embr.202256055⟩.
• 2023
  Laabassi F, Dheilly N, Beck C, Amaral R, Gonzalez G, Gaudaire D, Madeline A, Lecouturier F, Lecollinet S, Zientara S, Hans A, Valle-Casuso JC, Serological evidence of circulation of West Nile virus in equids in Algerian eastern drylands and its epidemiological risk factors., Comp Immunol Microbiol Infect Dis 2023 Mar; 94(): 101947.
• 2023
  Salloum PM, Jorge F, Dheilly NM, Poulin R, Eco-evolutionary implications of helminth microbiomes., J Helminthol 2023 Feb; 97(): e22.
• 2023
  Pardinhas C, Filipe R, Vergnaud P, Grapin M, Ferrière E, Jamet A, Fourgeaud J, Da Rocha N, Pérot P, Boyer O, Rabant M, Van Huyen JD, Isnard P, , Renal arcuate vein thrombosis-induced acute kidney injury: a rare multiple-Hit-mediated disease., Clin Kidney J 2023 Feb; 16(2): 367-373.
• 2023
  Hodžić A, Dheilly NM, Cabezas-Cruz A, Berry D, The helminth holobiont: a multidimensional host-parasite-microbiota interaction., Trends Parasitol 2023 Feb; 39(2): 91-100.
• 2023
  Bianca Elena Bratuleanu, Cristian Raileanu, Delphine Chrétien, Pablo Guardado-Calvo, Thomas Bigot, Gheorghe Savuta, Sarah Temmam, Marc Eloit, A Search for Tick-Associated, Bronnoya-like Virus Spillover into Sheep, Microorganisms, 2023, 11 (1), pp.209. ⟨10.3390/microorganisms11010209⟩.
• 2023
  Pérot P, Fourgeaud J, Rouzaud C, Regnault B, Da Rocha N, Fontaine H, Le Pavec J, Dolidon S, Garzaro M, Chrétien D, Morcrette G, Molina TJ, Ferroni A, Leruez-Ville M, Lortholary O, Jamet A, Eloit M, , Circovirus Hepatitis Infection in Heart-Lung Transplant Patient, France., Emerg Infect Dis 2023 Jan; 29(2): .
• 2022
  Kuhn JH, Adkins S, Alkhovsky SV, Avšič-Županc T, Ayllón MA, Bahl J, Balkema-Buschmann A, Ballinger MJ, Bandte M, Beer M, Bejerman N, Bergeron É, Biedenkopf N, Bigarré L, Blair CD, Blasdell KR, Bradfute SB, Briese T, Brown PA, Bruggmann R, Buchholz UJ, Buchmeier MJ, Bukreyev A, Burt F, Büttner C, Calisher CH, Candresse T, Carson J, Casas I, Chandran K, Charrel RN, Chiaki Y, Crane A, Crane M, Dacheux L, Bó ED, de la Torre JC, de Lamballerie X, de Souza WM, de Swart RL, Dheilly NM, Di Paola N, Di Serio F, Dietzgen RG, Digiaro M, Drexler JF, Duprex WP, Dürrwald R, Easton AJ, Elbeaino T, Ergünay K, Feng G, Feuvrier C, Firth AE, Fooks AR, Formenty PBH, Freitas-Astúa J, Gago-Zachert S, García ML, García-Sastre A, Garrison AR, Godwin SE, Gonzalez JJ, de Bellocq JG, Griffiths A, Groschup MH, Günther S, Hammond J, Hepojoki J, Hierweger MM, Hongō S, Horie M, Horikawa H, Hughes HR, Hume AJ, Hyndman TH, Jiāng D, Jonson GB, Junglen S, Kadono F, Karlin DG, Klempa B, Klingström J, Koch MC, Kondō H, Koonin EV, Krásová J, Krupovic M, Kubota K, Kuzmin IV, Laenen L, Lambert AJ, Lǐ J, Li JM, Lieffrig F, Lukashevich IS, Luo D, Maes P, Marklewitz M, Marshall SH, Marzano SL, McCauley JW, Mirazimi A, Mohr PG, Moody NJG, Morita Y, Morrison RN, Mühlberger E, Naidu R, Natsuaki T, Navarro JA, Neriya Y, Netesov SV, Neumann G, Nowotny N, Ochoa-Corona FM, Palacios G, Pallandre L, Pallás V, Papa A, Paraskevopoulou S, Parrish CR, Pauvolid-Corrêa A, Pawęska JT, Pérez DR, Pfaff F, Plemper RK, Postler TS, Pozet F, Radoshitzky SR, Ramos-González PL, Rehanek M, Resende RO, Reyes CA, Romanowski V, Rubbenstroth D, Rubino L, Rumbou A, Runstadler JA, Rupp M, Sabanadzovic S, Sasaya T, Schmidt-Posthaus H, Schwemmle M, Seuberlich T, Sharpe SR, Shi M, Sironi M, Smither S, Song JW, Spann KM, Spengler JR, Stenglein MD, Takada A, Tesh RB, Těšíková J, Thornburg NJ, Tischler ND, Tomitaka Y, Tomonaga K, Tordo N, Tsunekawa K, Turina M, Tzanetakis IE, Vaira AM, van den Hoogen B, Vanmechelen B, Vasilakis N, Verbeek M, von Bargen S, Wada J, Wahl V, Walker PJ, Whitfield AE, Williams JV, Wolf YI, Yamasaki J, Yanagisawa H, Ye G, Zhang YZ, Økland AL, 2022 taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales, Arch Virol 2022 Dec; 167(12): 2857-2906.
• 2022
  Jorge F, Dheilly NM, Froissard C, Poulin R, Association between parasite microbiomes and caste development and colony structure in a social trematode., Mol Ecol 2022 Nov; 31(21): 5608-5617.
• 2022
  Fourgeaud J, Regnault B, Faury H, Da Rocha N, Jamet A, Stirnemann J, Eloit M, Perot P, Leruez-Ville M, Driessen M, , , Fetal Zika virus infection diagnosed by metagenomic next-generation sequencing in amniotic fluid., Ultrasound Obstet Gynecol 2022 Sep; (): .
• 2022
  Pérot P, Bigot T, Temmam S, Regnault B, Eloit M, Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery., Viruses 2022 Sep; 14(9): .
• 2022
  Pommier JD, Gorman C, Crabol Y, Bleakley K, Sothy H, Santy K, Tran HTT, Nguyen LV, Bunnakea E, Hlaing CS, Aye AMM, Cappelle J, Herrant M, Piola P, Rosset B, Chevalier V, Tarantola A, Channa M, Honnorat J, Pinto AL, Rattanavong S, Vongsouvath M, Mayxay M, Phangmanixay S, Phongsavath K, Tin OS, Kyaw LL, Tin HH, Linn K, Tran TMH, Pérot P, Thuy NTT, Hien N, Phan PH, Buchy P, Dussart P, Laurent D, Eloit M, Dubot-Pérès A, Lortholary O, de Lamballerie X, Newton PN, Lecuit M, Childhood encephalitis in the Greater Mekong region (the SouthEast Asia Encephalitis Project): a multicentre prospective study., Lancet Glob Health 2022 Jul; 10(7): e989-e1002.
• 2022
  Bratuleanu B, Anita A, Temmam S, Dascalu A, Crivei L, Cozma A, Pourquier P, Savuta G, Eloit M, Anita D, Seroprevalence of Crimean-Congo Hemorrhagic Fever Among Small Ruminants from Southern Romania., Vector Borne Zoonotic Dis 2022 Jul; 22(7): 397-401.
• 2022
  Temmam S, Vongphayloth K, Baquero E, Munier S, Bonomi M, Regnault B, Douangboubpha B, Karami Y, Chrétien D, Sanamxay D, Xayaphet V, Paphaphanh P, Lacoste V, Somlor S, Lakeomany K, Phommavanh N, Pérot P, Dehan O, Amara F, Donati F, Bigot T, Nilges M, Rey FA, van der Werf S, Brey PT, Eloit M, Author Correction: Bat coronaviruses related to SARS-CoV-2 and infectious for human cells., Nature 2022 Jul; 607(7920): E19.
• 2022
  Dheilly NM, Lucas P, Blanchard Y, Rosario K, A World of Viruses Nested within Parasites: Unraveling Viral Diversity within Parasitic Flatworms (Platyhelminthes)., Microbiol Spectr 2022 Jun; 10(3): e0013822.
• 2022
  Temmam S, Vongphayloth K, Baquero E, Munier S, Bonomi M, Regnault B, Douangboubpha B, Karami Y, Chrétien D, Sanamxay D, Xayaphet V, Paphaphanh P, Lacoste V, Somlor S, Lakeomany K, Phommavanh N, Pérot P, Dehan O, Amara F, Donati F, Bigot T, Nilges M, Rey FA, van der Werf S, Brey PT, Eloit M, Bat coronaviruses related to SARS-CoV-2 and infectious for human cells., Nature 2022 Apr; 604(7905): 330-336.
• 2022
  Bratuleanu BE, Temmam S, Munier S, Chrétien D, Bigot T, van der Werf S, Savuta G, Eloit M, Detection of Phenuiviridae, Chuviridae Members, and a Novel Quaranjavirus in Hard Ticks From Danube Delta., Front Vet Sci 2022 ; 9(): 863814.
• 2022
  Sarah Temmam, Khamsing Vongphayloth, Eduard Baquero Salazar, Sandie Munier, Massimiliano Bonomi, Béatrice Regnault, Bounsavane Douangboubpha, Yasaman Karami, Delphine Chrétien, Daosavanh Sanamxay, Vilakhan Xayaphet, Phetphoumin Paphaphanh, Vincent Lacoste, Somphavanh Somlor, Khaithong Lakeomany, Nothasin Phommavanh, Philippe Pérot, Océane Dehan, Faustine Amara, Flora Donati, Thomas Bigot, Michael Nilges, Félix Rey, Sylvie van Der Werf, Paul Brey, Marc Eloit, De nouveaux coronavirus de chauve-souris similaires à SARS-CoV-2 éclairent l’origine de la pandémie de COVID-19, Journées Francophones de Virologie, Apr 2022, Strasbourg, France.
• 2021
  Jens Kuhn, Scott Adkins, Bernard Agwanda, Rim Al Kubrusli, Sergey Alkhovsky, Gaya Amarasinghe, Tatjana Avšič-Županc, María Ayllón, Justin Bahl, Anne Balkema-Buschmann, Matthew Ballinger, Christopher Basler, Sina Bavari, Martin Beer, Nicolas Bejerman, Andrew Bennett, Dennis Bente, Éric Bergeron, Brian Bird, Carol Blair, Kim Blasdell, Dag-Ragnar Blystad, Jamie Bojko, Wayne Borth, Steven Bradfute, Rachel Breyta, Thomas Briese, Paul Brown, Judith Brown, Ursula Buchholz, Michael Buchmeier, Alexander Bukreyev, Felicity Burt, Carmen Büttner, Charles Calisher, Mengji Cao, Inmaculada Casas, Kartik Chandran, Rémi N. Charrel, Qi Cheng, Yuya Chiaki, Marco Chiapello, Il-Ryong Choi, Marina Ciuffo, J. Christopher S. Clegg, Ian Crozier, Elena Dal Bó, Juan Carlos de La Torre, Xavier de Lamballerie, Rik de Swart, Humberto Debat, Nolwenn Dheilly, Emiliano Di Cicco, Nicholas Di Paola, Francesco Di Serio, Ralf Dietzgen, Michele Digiaro, Olga Dolnik, Michael Drebot, J. Felix Drexler, William Dundon, W. Paul Duprex, Ralf Dürrwald, John Dye, Andrew Easton, Hideki Ebihara, Toufic Elbeaino, Koray Ergünay, Hugh Ferguson, Anthony Fooks, Marco Forgia, Pierre Formenty, Jana Fránová, Juliana Freitas-Astúa, Jingjing Fu, Stephanie Fürl, Selma Gago-Zachert, George Fú Gāo, María Laura García, Adolfo García-Sastre, Aura Garrison, Thomas Gaskin, Jean-Paul Gonzalez, Anthony Griffiths, Tony Goldberg, Martin Groschup, Stephan Günther, Roy Hall, John Hammond, Tong Han, Jussi Hepojoki, Roger Hewson, Jiang Hong, Ni Hong, Seiji Hongo, Masayuki Horie, John Hu, Tao Hu, Holly Hughes, Florian Hüttner, Timothy Hyndman, M. Ilyas, Risto Jalkanen, Dàohóng Jiāng, Gilda Jonson, Sandra Junglen, Fujio Kadono, Karia Kaukinen, Michael Kawate, Boris Klempa, Jonas Klingström, Gary Kobinger, Igor Koloniuk, Hideki Kondō, Eugene Koonin, Mart Krupovic, Kenji Kubota, Gael Kurath, Lies Laenen, Amy Lambert, Stanley Langevin, Benhur Lee, Elliot Lefkowitz, Eric M. Leroy, Shaorong Li, Longhui Li, Jiànróng Lǐ, Huazhen Liu, Igor Lukashevich, Piet Maes, William Marciel de Souza, Marco Marklewitz, Sergio Marshall, Shin-Yi Marzano, Sebastien Massart, John Mccauley, Michael Melzer, Nicole Mielke-Ehret, Kristina Miller, Tobi Ming, Ali Mirazimi, Gideon Mordecai, Hans-Peter Mühlbach, Elke Mühlberger, Rayapati Naidu, Tomohide Natsuaki, José Navarro, Sergey Netesov, Gabriele Neumann, Norbert Nowotny, Márcio Nunes, Alejandro Olmedo-Velarde, Gustavo Palacios, Vicente Pallás, Bernadett Pályi, Anna Papa, Sofia Paraskevopoulou, Adam Park, Colin Parrish, David Patterson, Alex Pauvolid-Corrêa, Janusz Pawęska, Susan Payne, Carlotta Peracchio, Daniel Pérez, Thomas Postler, Liying Qi, Sheli Radoshitzky, Renato Resende, Carina Reyes, Bertus Rima, Gabriel Robles Luna, Víctor Romanowski, Paul Rota, Dennis Rubbenstroth, Luisa Rubino, Jonathan Runstadler, Sead Sabanadzovic, Amadou Alpha Sall, Maria Salvato, Rosemary Sang, Takahide Sasaya, Angela Schulze, Martin Schwemmle, Mang Shi, Xiǎohóng Shí, Zhènglì Shí, Yoshifumi Shimomoto, Yukio Shirako, Stuart Siddell, Peter Simmonds, Manuela Sironi, Guy Smagghe, Sophie Smither, Jin-Won Song, Kirsten Spann, Jessica Spengler, Mark Stenglein, David Stone, Jari Sugano, Curtis Suttle, Amy Tabata, Ayato Takada, Shigeharu Takeuchi, David Tchouassi, Amy Teffer, Robert Tesh, Natalie Thornburg, Yasuhiro Tomitaka, Keizō Tomonaga, Noël Tordo, Baldwyn Torto, Jonathan Towner, Shinya Tsuda, Changchun Tu, Massimo Turina, Ioannis Tzanetakis, Janice Uchida, Tomio Usugi, Anna Maria Vaira, Marta Vallino, Bernadette van den Hoogen, Arvind Varsani, Nikos Vasilakis, Martin Verbeek, Susanne von Bargen, Jiro Wada, Victoria Wahl, Peter Walker, Lin-Fa Wang, Guoping Wang, Yanxiang Wang, Yaqin Wang, Muhammad Waqas, Tàiyún Wèi, Shaohua Wen, Anna Whitfield, John Williams, Yuri Wolf, Jiangxiang Wu, Lei Xu, Hironobu Yanagisawa, Caixia Yang, Zuokun Yang, F. Murilo Zerbini, Lifeng Zhai, Yong-Zhen Zhang, Song Zhang, Jinguo Zhang, Zhe Zhang, Xueping Zhou, 2021 Taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales, Archives of Virology, 2021, 166 (12), pp.3513-3566. ⟨10.1007/s00705-021-05143-6⟩.
• 2021
  Virachith S, Pommelet V, Calvez E, Khounvisith V, Sayasone S, Kounnavong S, Maxay M, Xangsayarath P, Temmam S, Eloit M, Escriou N, Rose T, Vongphayloth K, Hübschen JM, Lacoste V, Somlor S, Phonekeo D, Brey PT, Black AP, Low seroprevalence of COVID-19 in Lao PDR, late 2020., Lancet Reg Health West Pac 2021 Aug; 13(): 100197.
• 2021
  Philippe Perot, Franck Bielle, Thomas Bigot, Vincent Foulongne, Karine Bolloré, Delphine Chrétien, Patricia Gil, Serafin Gutierrez, Grégory L’ambert, Karima Mokhtari, Jan Hellert, Marie Flamand, Carole Tamietti, Muriel Coulpier, Anne Huard de Verneuil, Sarah Temmam, Thérèse Couderc, Edouard de Sousa Cunha, Susana Boluda, Isabelle Plu, Marie Bernadette Delisle, Fabrice Bonneville, David Brassat, Claire Fieschi, Marion Malphettes, Charles Duyckaerts, Bertrand Mathon, Sophie Demeret, Danielle Seilhean, Marc Eloit, Identification of Umbre Orthobunyavirus as a Novel Zoonotic Virus Responsible for Lethal Encephalitis in 2 French Patients With Hypogammaglobulinemia, Clinical Infectious Diseases, 2021, 72 (10), pp.1701-1708. ⟨10.1093/cid/ciaa308⟩.
• 2021
  Regnault B, Evrard B, Plu I, Dacheux L, Troadec E, Cozette P, Chrétien D, Duchesne M, Jean-Michel V, Jamet A, Leruez M, Pérot P, Bourhy H, Eloit M, Seilhean D, , First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1., Clin Infect Dis 2021 May; (): .
• 2021
  Berteloot L, Berthaud R, Temmam S, Lozach C, Zanelli E, Blanc T, Heloury Y, Capito C, Chardot C, Sarnacki S, Garcelon N, Lacaille F, Charbit M, Pastural M, Rabant M, Boddaert N, Leruez-Ville M, Eloit M, Sermet-Gaudelus I, Dehoux L, Boyer O, Arterial abnormalities identified in kidneys transplanted into children during the COVID-19 pandemic., Am J Transplant 2021 May; 21(5): 1937-1943.
• 2021
  Isabelle Sermet-Gaudelus, Sarah Temmam, Christèle Huon, Sylvie Behillil, Vincent Gajdos, Thomas Bigot, Thibaut Lurier, Delphine Chrétien, Marija Backovic, Agnès Delaunay-Moisan, Flora Donati, Mélanie Albert, Elsa Foucaud, Bettina Mesplées, Grégoire Benoist, Albert Faye, Marc Duval-Arnould, Célia Cretolle, Marina Charbit, Mélodie Aubart, Johanne Auriau, Mathie Lorrot, Dulanjalee Kariyawasam, Laura Fertitta, Gilles Orliaguet, Bénédicte Pigneur, Brigitte Bader-Meunier, Coralie Briand, Vincent Enouf, Julie Toubiana, Tiffany Guilleminot, Sylvie van Der Werf, Marianne Leruez-Ville, Marc Eloit, Une infection antérieure par des coronavirus saisonniers n’empêche pas la COVID-19 chez les enfants., Journées Francophones de Virologie, Apr 2021, Montpellier, France.
• 2021
  Sarah Temmam, Alexis Lécu, Anaïs Sailler, Benjamin Lamgait, Florence Ollivet-Courtois, Christèle Huon, Sylvie Behilill, Jessica Vanhomwegen, Valérie Caro, Jean-Claude Manuguerra, Sylvie van Der Werf, Marc Eloit, Faune sauvage et SARS-CoV-2 : exposition des animaux de zoo pendant la circulation du virus en France en 2020., Journées Francophones de Virologie, Apr 2021, Montpellier, France.
• 2021
  Philippe Pérot, Franck Bielle, Thomas Bigot, Vincent Foulongne, Karine Bolloré, Delphine Chrétien, Patricia Gil, Serafin Gutierrez, Grégory L'Ambert, Karima Mokhtari, Jan Hellert, Marie Flamand, Carole Tamietti, Muriel Coulpier, Anne Huard de Verneuil, Sarah Temmam, Thérèse Couderc, Edouard de Sousa Cunha, Susana Boluda, Isabelle Plu, Marie Bernadette Delisle, Fabrice Bonneville, David Brassat, Claire Fieschi, Marion Malphettes, Charles Duyckaerts, Bertrand Mathon, Sophie Demeret, Danielle Seilhean, Marc Eloit, Identification d’un nouvel arbovirus neurotrope en France : le virus Umbre, XXIIIèmes Journées Francophones de Virologie, Apr 2021, Montpellier, France.
• 2021
  Bratuleanu BE, Temmam S, Chrétien D, Regnault B, Pérot P, Bouchier C, Bigot T, Savuța G, Eloit M, The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health., Transbound Emerg Dis 2022 May; 69(3): 1387-1403.
• 2021
  Sermet-Gaudelus I, Temmam S, Huon C, Behillil S, Gajdos V, Bigot T, Lurier T, Chrétien D, Backovic M, Delaunay-Moisan A, Donati F, Albert M, Foucaud E, Mesplées B, Benoist G, Faye A, Duval-Arnould M, Cretolle C, Charbit M, Aubart M, Auriau J, Lorrot M, Kariyawasam D, Fertitta L, Orliaguet G, Pigneur B, Bader-Meunier B, Briand C, Enouf V, Toubiana J, Guilleminot T, van der Werf S, Leruez-Ville M, Eloit M, Prior infection by seasonal coronaviruses, as assessed by serology, does not prevent SARS-CoV-2 infection and disease in children, France, April to June 2020., Euro Surveill 2021 Apr; 26(13): .
• 2021
  Arnaud Fontanet, Laura Tondeur, Rebecca Grant, Sarah Temmam, Yoann Madec, Thomas Bigot, Ludivine Grzelak, Isabelle Cailleau, Camille Besombes, Marie-Noëlle Ungeheuer, Charlotte Renaudat, Blanca Liliana Perlaza, Laurence Arowas, Nathalie Jolly, Sandrine Fernandes Pellerin, Lucie Kuhmel, Isabelle Staropoli, Christèle Huon, Kuang-Yu Chen, Bernadette Crescenzo-Chaigne, Sandie Munier, Pierre Charneau, Caroline Demeret, Timothée Bruel, Marc Eloit, Olivier Schwartz, Bruno Hoen, SARS-CoV-2 infection in schools in a northern French city: a retrospective serological cohort study in an area of high transmission, France, January to April 2020, Eurosurveillance, 2021, 26 (15), pp.2001695. ⟨10.2807/1560-7917.es.2021.26.15.2001695⟩.
• 2021
  Fertitta L, Welfringer-Morin A, Ouedrani A, Polivka L, Chhun S, Chatenoud L, Fourgeaud J, Hadj-Rabia S, Temmam S, Eloit M, Sermet-Gaudelus I, Bodemer C, Immunological and virological profile of children with chilblain-like lesions and SARS-CoV-2., J Eur Acad Dermatol Venereol 2021 Mar; 35(3): e164-e167.
• 2021
  Béatrice Regnault, Thomas Bigot, Laurence Ma, Philippe Pérot, Sarah Temmam, Marc Eloit, Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results, Viruses, 2021, 13 (2), pp.253. ⟨10.3390/v13020253⟩.
• 2021
  Keyser C, Zvénigorosky V, Gonzalez A, Fausser JL, Jagorel F, Gérard P, Tsagaan T, Duchesne S, Crubézy E, Ludes B, Genetic evidence suggests a sense of family, parity and conquest in the Xiongnu Iron Age nomads of Mongolia., Hum Genet 2021 Feb; 140(2): 349-359.
• 2020
  Ludivine Grzelak, Sarah Temmam, Cyril Planchais, Caroline Demeret, Laura Tondeur, Christèle Huon, Florence Guivel-Benhassine, Isabelle Staropoli, Maxime Chazal, Jeremy Dufloo, Delphine Planas, Julian Buchrieser, Maaran Michael Rajah, Remy Robinot, Françoise Porrot, Mélanie Albert, Kuang-Yu Chen, Bernadette Crescenzo-Chaigne, Flora Donati, François Anna, Philippe Souque, Marion Gransagne, Jacques Bellalou, Mireille Nowakowski, Marija Backovic, Lila Bouadma, Lucie Le Fevre, Quentin Le Hingrat, Diane Descamps, Annabelle Pourbaix, Cédric Laouénan, Jade Ghosn, Yazdan Yazdanpanah, Camille Besombes, Nathalie Jolly, Sandrine Pellerin-Fernandes, Olivia Cheny, Marie-Noëlle Ungeheuer, Guillaume Mellon, Pascal Morel, Simon Rolland, Felix Rey, Sylvie Behillil, Vincent Enouf, Audrey Lemaitre, Marie-Aude Créach, Stéphane Pêtres, Nicolas Escriou, Pierre Charneau, Arnaud Fontanet, Bruno Hoen, Timothée Bruel, Marc Eloit, Hugo Mouquet, Olivier Schwartz, Sylvie van Der Werf, A comparison of four serological assays for detecting anti–SARS-CoV-2 antibodies in human serum samples from different populations, Science Translational Medicine, 2020, 12 (559), pp.eabc3103. ⟨10.1126/scitranslmed.abc3103⟩.
• 2020
  Sarah Temmam, Vibol Hul, Thomas Bigot, Mael Bessaud, Delphine Chrétien, Thavry Hoem, Christopher Gorman, Veasna Duong, Philippe Dussart, Julien Cappelle, Marc Eloit, Whole genome sequencing and phylogenetic characterization of a novel bat-associated picornavirus-like virus with an unusual genome organization, Infection, Genetics and Evolution, 2020, 78, 5 p. ⟨10.1016/j.meegid.2019.104130⟩.
• 2020
  Lotty Birnberg, Sarah Temmam, Carles Aranda, Florencia Correa-Fiz, Sandra Talavera, Thomas Bigot, Marc Eloit, Núria Busquets, Viromics on Honey-Baited FTA Cards as a New Tool for the Detection of Circulating Viruses in Mosquitoes, Viruses, 2020, 12, ⟨10.3390/v12030274⟩.
• 2020
  Mathilde Gondard, Sarah Temmam, Elodie Devillers, Valérie Pinarello, Thomas Bigot, Delphine Chrétien, Rosalie Aprelon, Muriel Vayssier Taussat, Emmanuel Albina, Marc Eloit, Sara Moutailler, RNA Viruses of Amblyomma variegatum and Rhipicephalus microplus and Cattle Susceptibility in the French Antilles, Viruses, 2020, 12 (2), ⟨10.3390/v12020144⟩.
• 2020
  Temmam S, Barbarino A, Maso D, Behillil S, Enouf V, Huon C, Jaraud A, Chevallier L, Backovic M, Pérot P, Verwaerde P, Tiret L, van der Werf S, Eloit M, Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus., One Health 2020 Dec; 10(): 100164.
• 2019
  Sarah Temmam, Khamsing Vongphayloth, Jeffrey C. Hertz, Ian Sutherland, Bounsavane Douangboubpha, Marc Grandadam, Thomas Bigot, Paul T. Brey, Marc Eloit, Six Nearly Complete Genome Segments of a Novel Reovirus Identified in Laotian Batflies, Microbiology Resource Announcements, 2019, 8 (46), pp.e00733-19. ⟨10.1128/MRA.00733-19⟩.
• 2019
  Sarah Temmam, Thomas Bigot, Delphine Chrétien, Mathilde Gondard, Philippe Pérot, Virginie Pommelet, Evelyne Dufour, Stéphane Petres, Elodie Devillers, Thavry Hoem, Valérie Pinarello, Vibol Hul, Khamsing Vongphayloth, Jeffrey C Hertz, Irène Loiseau, Marine Dumarest, Veasna Duong, Muriel Vayssier Taussat, Marc Grandadam, Emmanuel Albina, Philippe Dussart, Sara Moutailler, Julien Cappelle, Paul T Brey, Marc Eloit, Insights into the Host Range, Genetic Diversity, and Geographical Distribution of Jingmenviruses, MSphere, 2019, 4 (6), pp.e00645-19. ⟨10.1128/mSphere.00645-19⟩.
• 2019
  Pérot P, Biton A, Marchetta J, Pourcelot AG, Nazac A, Marret H, Hébert T, Chrétien D, Demazoin MC, Falguières M, Arowas L, Laude H, Heard I, Eloit M, Broad-Range Papillomavirus Transcriptome as a Biomarker of Papillomavirus-Associated Cervical High-Grade Cytology, J Mol Diagn 2019 Sep;21(5):768-781.
• 2019
  Du-Thanh A, Pérot P, Foulongne V, Dereure O, Guillot B, Eloit M, No evidence for viral transcripts in dermatofibrosarcoma protuberans, Br. J. Dermatol. 2019 Sep;181(3):634-636.
• 2019
  Cheval J, Muth E, Gonzalez G, Coulpier M, Beurdeley P, Cruveiller S, Eloit M, Adventitious Virus Detection in Cells by High-Throughput Sequencing of Newly Synthesized RNAs: Unambiguous Differentiation of Cell Infection from Carryover of Viral Nucleic Acids, mSphere 2019 06;4(3).
• 2019
  Leclerc-Mercier S, Moshous D, Neven B, Mahlaoui N, Martin L, Pellier I, Blanche S, Picard C, Fischer A, Perot P, Eloit M, Fraitag S, Bodemer C, Cutaneous granulomas with primary immunodeficiency in children: a report of 17 new patients and a review of the literature, J Eur Acad Dermatol Venereol 2019 Jul;33(7):1412-1420.
• 2019
  Brussel A, Brack K, Muth E, Zirwes R, Cheval J, Hebert C, Charpin JM, Marinaci A, Flan B, Ruppach H, Beurdeley P, Eloit M, Use of a new RNA next generation sequencing approach for the specific detection of virus infection in cells, Biologicals 2019 May;59:29-36.
• 2019
  Temmam S, Hul V, Bigot T, Hoem T, Gorman C, Duong V, Dussart P, Cappelle J, Eloit M, , A Novel Polycipiviridae Virus Identified in Pteropus lylei Stools., Microbiol Resour Announc 2019 Apr; 8(15): .
• 2019
  Mary L, Zvénigorosky V, Kovalev A, Gonzalez A, Fausser JL, Jagorel F, Kilunovskaya M, Semenov V, Crubézy E, Ludes B, Keyser C, Genetic kinship and admixture in Iron Age Scytho-Siberians., Hum Genet 2019 Apr; 138(4): 411-423.
• 2019
  Perelygina L, Buchbinder D, Dorsey MJ, Eloit M, Hauck F, Hautala T, Moshous D, Uriarte I, Deripapa E, Icenogle J, Sullivan KE, Outcomes for Nitazoxanide Treatment in a Case Series of Patients with Primary Immunodeficiencies and Rubella Virus-Associated Granuloma, J. Clin. Immunol. 2019 01;39(1):112-117.
• 2019
  Haddad-Boubaker S, Joffret ML, Pérot P, Bessaud M, Meddeb Z, Touzi H, Delpeyroux F, Triki H, Eloit M, Metagenomic analysis identifies human adenovirus 31 in children with acute flaccid paralysis in Tunisia, Arch. Virol. 2019 Mar;164(3):747-755.
• 2019
  Buchbinder D, Hauck F, Albert MH, Rack A, Bakhtiar S, Shcherbina A, Deripapa E, Sullivan KE, Perelygina L, Eloit M, Neven B, Pérot P, Moshous D, Suarez F, Bodemer C, Bonilla FA, Vaz LE, Krol AL, Klein C, Seppanen M, Nugent DJ, Singh J, Ochs HD, Rubella Virus-Associated Cutaneous Granulomatous Disease: a Unique Complication in Immune-Deficient Patients, Not Limited to DNA Repair Disorders, J. Clin. Immunol. 2019 01;39(1):81-89.
• 2019
  Sarah Temmam, Delphine Chrétien, Thomas Bigot, Evelyne Dufour, Stéphane Petres, Marc Desquesnes, Elodie Devillers, Marine Dumarest, Léna Yousfi, Sathaporn Jittapalapong, Anamika Karnchanabanthoeng, Kittipong Chaisiri, Léa Gagnieur, Jean-Francois Cosson, Muriel Vayssier Taussat, Serge Morand, Sara Moutailler, Marc Eloit, Monitoring Silent Spillovers Before Emergence: A Pilot Study at the Tick/Human Interface in Thailand, Frontiers in Microbiology, 2019, 10, pp.2315. ⟨10.3389/fmicb.2019.02315⟩.
• 2019
  Thomas Bigot, Sarah Temmam, Philippe Pérot, Marc Eloit, RVDB-prot, a reference viral protein database and its HMM profiles [version 2; peer review: 2 approved], F1000Research, 2020, 8, pp.530. ⟨10.12688/f1000research.18776.2⟩.
• 2018
  Ng SH, Braxton C, Eloit M, Feng SF, Fragnoud R, Mallet L, Mee ET, Sathiamoorthy S, Vandeputte O, Khan AS, Current Perspectives on High-Throughput Sequencing (HTS) for Adventitious Virus Detection: Upstream Sample Processing and Library Preparation, Viruses 2018 10;10(10).
• 2018
  Phan NT, Gouilh MA, Paireau J, Phuong L, Cheval J, Ngu ND, Hébert C, Nguyen TH, Lortholary O, Tondeur L, Manuguerra JC, Barouki R, Sander J, Janzen N, Nguyen HT, Brey PT, Fontanet A, Eloit M, Hypoglycemic Toxins and Enteroviruses as Causes of Outbreaks of Acute Encephalitis-Like Syndrome in Children, Bac Giang Province, Northern Vietnam, Emerging Infect. Dis. 2018 08;24(8):1435-1443.
• 2018
  Eiden M, Gil P, Ziegler U, Rakotoarivony I, Marie A, Frances B, L'Ambert G, Simonin Y, Foulongne V, Groschup MH, Gutierrez S, Eloit M, Emergence of two Usutu virus lineages in Culex pipiens mosquitoes in the Camargue, France, 2015, Infect. Genet. Evol. 2018 07;61:151-154.
• 2018
  Monteil-Bouchard S, Temmam S, Desnues C, , Protocol for Generating Infectious RNA Viromes from Complex Biological Samples., Methods Mol Biol 2018 ; 1838(): 25-36.
• 2017
  Comoy EE, Mikol J, Jaffré N, Lebon V, Levavasseur E, Streichenberger N, Sumian C, Perret-Liaudet A, Eloit M, Andreoletti O, Haïk S, Hantraye P, Deslys JP, Experimental transfusion of variant CJD-infected blood reveals previously uncharacterised prion disorder in mice and macaque, Nat Commun 2017 11;8(1):1268.
• 2017
  Du-Thanh A, Dereure O, Cheval J, Dumarest M, Al-Shikhley L, Girard C, Guillot B, Eloit M, No Viral Transcripts Associated with Folliculotropic Mycosis Fungoides Using a High Throughput Sequencing Approach, Acta Derm. Venereol. 2017 Oct;97(9):1125-1126.
• 2017
  P. Parize, E. Muth, C. Richaud, M. Gratigny, B. Pilmis, A. Lamamy, J.-L. Mainardi, J. Cheval, L. de Visser, F. Jagorel, L. Ben Yahia, G. Bamba, M. Dubois, O. Join-Lambert, M. Leruez-Ville, X. Nassif, A. Lefort, F. Lanternier, F. Suarez, O. Lortholary, M. Lecuit, Marc Eloit, Untargeted next-generation sequencing-based first-line diagnosis of infection in immunocompromised adults: a multicentre, blinded, prospective study, Clinical Microbiology and Infection, 2017, 23 (8), pp.574.e1-574.e6. ⟨10.1016/j.cmi.2017.02.006⟩.
• 2017
  Horwood PF, Duong V, Laurent D, Mey C, Sothy H, Santy K, Richner B, Heng S, Hem S, Cheval J, Gorman C, Dussart P, de Jong MD, Kerleguer A, Guillard B, Murgue B, Lecuit M, de Lamballerie X, Farrar JJ, Tarantola A, Eloit M, Buchy P, , Aetiology of acute meningoencephalitis in Cambodian children, 2010-2013., Emerg Microbes Infect 2017 May; 6(5): e35.
• 2017
  Zaulet M, Petrovan V, Birladeanu AM, Stoian AMM, Kevorkian SEM, Nichita C, Eloit M, Buburuzan L, Identification and prevalence of swine pasivirus 1 in eastern Romanian pig farms, J. Vet. Diagn. Invest. 2017 May;29(3):305-311.
• 2017
  Pérot P, Lecuit M, Eloit M, , Astrovirus Diagnostics., Viruses 2017 Jan; 9(1): .
• 2017
  Neven B, Pérot P, Bruneau J, Pasquet M, Ramirez M, Diana JS, Luzi S, Corre-Catelin N, Chardot C, Moshous D, Leclerc Mercier S, Mahlaoui N, Aladjidi N, Le Bail B, Lecuit M, Bodemer C, Molina TJ, Blanche S, Eloit M, , Cutaneous and Visceral Chronic Granulomatous Disease Triggered by a Rubella Virus Vaccine Strain in Children With Primary Immunodeficiencies., Clin Infect Dis 2017 Jan; 64(1): 83-86.
• 2016
  Duong V, Mey C, Eloit M, Zhu H, Danet L, Huang Z, Zou G, Tarantola A, Cheval J, Perot P, Laurent D, Richner B, Ky S, Heng S, Touch S, Sovann L, van Doorn R, Tan Tran T, Farrar JJ, Wentworth DE, Das SR, Stockwell TB, Manuguerra JC, Delpeyroux F, Guan Y, Altmeyer R, Buchy P, Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia, Emerg Microbes Infect 2016 Sep;5(9):e104.
• 2016
  Temmam S, Desnues C, , Zoonotic viruses: how to monitor their emergence?, Virologie (Montrouge) 2016 Aug; 20(4): 231-244.
• 2016
  Temmam S, Khalil JB, La Scola B, Desnues C, , A new asfarvirus infecting amoebas discovered in hematophagous arthropods and their vertebrate hosts., Virologie (Montrouge) 2016 Aug; 20(4): 245-247.
• 2016
  Blasdell KR, Duong V, Eloit M, Chretien F, Ly S, Hul V, Deubel V, Morand S, Buchy P, Evidence of human infection by a new mammarenavirus endemic to Southeastern Asia, Elife 2016 06;5.
• 2016
  Mee ET, Preston MD, Minor PD, Schepelmann S, Development of a candidate reference material for adventitious virus detection in vaccine and biologicals manufacturing by deep sequencing., Vaccine 2016 Apr; 34(17): 2035-43.
• 2016
  Sauvage V, Laperche S, Cheval J, Muth E, Dubois M, Boizeau L, Hébert C, Lionnet F, Lefrère JJ, Eloit M, Viral metagenomics applied to blood donors and recipients at high risk for blood-borne infections, Blood Transfus 2016 09;14(5):400-7.
• 2016
  Temmam S, Monteil-Bouchard S, Robert C, Baudoin JP, Sambou M, Aubadie-Ladrix M, Labas N, Raoult D, Mediannikov O, Desnues C, , Characterization of Viral Communities of Biting Midges and Identification of Novel Thogotovirus Species and Rhabdovirus Genus., Viruses 2016 Mar; 8(3): 77.
• 2016
  Moutailler S, Popovici I, Devillers E, Vayssier-Taussat M, Eloit M, Diversity of viruses in Ixodes ricinus, and characterization of a neurotropic strain of Eyach virus, New Microbes New Infect 2016 May;11:71-81.
• 2016
  Temmam S, Davoust B, Chaber AL, Lignereux Y, Michelle C, Monteil-Bouchard S, Raoult D, Desnues C, , Screening for Viral Pathogens in African Simian Bushmeat Seized at A French Airport., Transbound Emerg Dis 2017 Aug; 64(4): 1159-1167.
• 2016
  Halary S, Temmam S, Raoult D, Desnues C, Viral metagenomics: are we missing the giants?, Curr. Opin. Microbiol. 2016 06;31:34-43.
• 2016
  Sauvage V, Eloit M, Viral metagenomics and blood safety, Transfus Clin Biol 2016 Feb;23(1):28-38.
• 2015
  Temmam S, Monteil-Bouchard S, Sambou M, Aubadie-Ladrix M, Azza S, Decloquement P, Khalil JY, Baudoin JP, Jardot P, Robert C, La Scola B, Mediannikov OY, Raoult D, Desnues C, , Faustovirus-Like Asfarvirus in Hematophagous Biting Midges and Their Vertebrate Hosts., Front Microbiol 2015 ; 6(): 1406.
• 2015
  Temmam S, Monteil-Bouchard S, Robert C, Pascalis H, Michelle C, Jardot P, Charrel R, Raoult D, Desnues C, , Host-Associated Metagenomics: A Guide to Generating Infectious RNA Viromes., PLoS One 2015 ; 10(10): e0139810.
• 2015
  Frémond ML, Pérot P, Muth E, Cros G, Dumarest M, Mahlaoui N, Seilhean D, Desguerre I, Hébert C, Corre-Catelin N, Neven B, Lecuit M, Blanche S, Picard C, Eloit M, , Next-Generation Sequencing for Diagnosis and Tailored Therapy: A Case Report of Astrovirus-Associated Progressive Encephalitis., J Pediatric Infect Dis Soc 2015 Sep; 4(3): e53-7.
• 2015
  Razzauti M, Galan M, Bernard M, Maman S, Klopp C, Charbonnel N, Vayssier-Taussat M, Eloit M, Cosson JF, A Comparison between Transcriptome Sequencing and 16S Metagenomics for Detection of Bacterial Pathogens in Wildlife, PLoS Negl Trop Dis 2015;9(8):e0003929.
• 2015
  Denesvre C, Dumarest M, Rémy S, Gourichon D, Eloit M, Chicken skin virome analyzed by high-throughput sequencing shows a composition highly different from human skin, Virus Genes 2015 Oct;51(2):209-16.
• 2015
  Arnold F, Hober D, Chaussade H, Dumarest M, Sané F, Nowakowsjki M, Rigaud E, Bellalou J, Desailloud R, Coursaget P, Eloit M, Antibodies to VP1 of swine pasivirus in humans without evidence of transmission from a pig source, J. Clin. Virol. 2015 Aug;69:36-9.
• 2015
  Vayssier-Taussat M, Cosson JF, Degeilh B, Eloit M, Fontanet A, Moutailler S, Raoult D, Sellal E, Ungeheuer MN, Zylbermann P, How a multidisciplinary ‘One Health’ approach can combat the tick-borne pathogen threat in Europe, Future Microbiol 2015;10(5):809-18.
• 2015
  Lecuit M, Eloit M, , The potential of whole genome NGS for infectious disease diagnosis., Expert Rev Mol Diagn 2015 ; 15(12): 1517-9.
• 2014
  Yssouf A, Socolovschi C, Kernif T, Temmam S, Lagadec E, Tortosa P, Parola P, , First molecular detection of Rickettsia africae in ticks from the Union of the Comoros., Parasit Vectors 2014 Sep; 7(): 444.
• 2014
  Temmam S, Davoust B, Berenger JM, Raoult D, Desnues C, , Viral metagenomics on animals as a tool for the detection of zoonoses prior to human infection?, Int J Mol Sci 2014 Jun; 15(6): 10377-97.
• 2013
  Popgeorgiev N, Temmam S, Raoult D, Desnues C, , Describing the silent human virome with an emphasis on giant viruses., Intervirology 2013 ; 56(6): 395-412.
• 2013
  Maquart M, Temmam S, Héraud JM, Leparc-Goffart I, Cêtre-Sossah C, Dellagi K, Cardinale E, Pascalis H, , Development of real-time RT-PCR for the detection of low concentrations of Rift Valley fever virus., J Virol Methods 2014 Jan; 195(): 92-9.
• 2012
  Temmam S, Besnard L, Andriamandimby SF, Foray C, Rasamoelina-Andriamanivo H, Héraud JM, Cardinale E, Dellagi K, Pavio N, Pascalis H, Porphyre V, , High prevalence of hepatitis E in humans and pigs and evidence of genotype-3 virus in swine, Madagascar., Am J Trop Med Hyg 2013 Feb; 88(2): 329-38.
• 2012
  Lagadec E, Gomard Y, Guernier V, Dietrich M, Pascalis H, Temmam S, Ramasindrazana B, Goodman SM, Tortosa P, Dellagi K, , Pathogenic Leptospira spp. in bats, Madagascar and Union of the Comoros., Emerg Infect Dis 2012 Oct; 18(10): 1696-8.
• 2012
  Cardinale E, Pascalis H, Temmam S, Hervé S, Saulnier A, Turpin M, Barbier N, Hoarau J, Quéguiner S, Gorin S, Foray C, Roger M, Porphyre V, André P, Thomas T, de Lamballerie X, Dellagi K, Simon G, , Influenza A(H1N1)pdm09 virus in pigs, Réunion Island., Emerg Infect Dis 2012 Oct; 18(10): 1665-8.
• 2012
  Deboosere N, Pinon A, Caudrelier Y, Delobel A, Merle G, Perelle S, Temmam S, Loutreul J, Morin T, Estienney M, Belliot G, Pothier P, Gantzer C, Vialette M, , Adhesion of human pathogenic enteric viruses and surrogate viruses to inert and vegetal food surfaces., Food Microbiol 2012 Oct; 32(1): 48-56.
• 2012
  Pascalis H, Temmam S, Turpin M, Rollot O, Flahault A, Carrat F, de Lamballerie X, Gérardin P, Dellagi K, , Intense co-circulation of non-influenza respiratory viruses during the first wave of pandemic influenza pH1N1/2009: a cohort study in Reunion Island., PLoS One 2012 ; 7(9): e44755.
• 2012
  Wilkinson DA, Temmam S, Lebarbenchon C, Lagadec E, Chotte J, Guillebaud J, Ramasindrazana B, Héraud JM, de Lamballerie X, Goodman SM, Dellagi K, Pascalis H, , Identification of novel paramyxoviruses in insectivorous bats of the Southwest Indian Ocean., Virus Res 2012 Dec; 170(1-2): 159-63.
• 2012
  Pascalis H, Temmam S, Wilkinson DA, Dsouli N, Turpin M, de Lamballerie X, Dellagi K, , Molecular evolutionary analysis of pH1N1 2009 influenza virus in Reunion Island, South West Indian Ocean region: a cohort study., PLoS One 2012 ; 7(8): e43742.
• 2011
  Dellagi K, Rollot O, Temmam S, Salez N, Guernier V, Pascalis H, Gérardin P, Fianu A, Lapidus N, Naty N, Tortosa P, Boussaïd K, Jaffar-Banjee MC, Filleul L, Flahault A, Carrat F, Favier F, de Lamballerie X, , Pandemic influenza due to pH1N1/2009 virus: estimation of infection burden in Reunion Island through a prospective serosurvey, austral winter 2009., PLoS One 2011 ; 6(9): e25738.
• 2011
  Fraisse A, Temmam S, Deboosere N, Guillier L, Delobel A, Maris P, Vialette M, Morin T, Perelle S, , Comparison of chlorine and peroxyacetic-based disinfectant to inactivate Feline calicivirus, Murine norovirus and Hepatitis A virus on lettuce., Int J Food Microbiol 2011 Nov; 151(1): 98-104.
• 2010
  Deboosere N, Pinon A, Delobel A, Temmam S, Morin T, Merle G, Blaise-Boisseau S, Perelle S, Vialette M, , A predictive microbiology approach for thermal inactivation of Hepatitis A virus in acidified berries., Food Microbiol 2010 Oct; 27(7): 962-7.
• 2009
  Charrel RN, Moureau G, Temmam S, Izri A, Marty P, Parola P, da Rosa AT, Tesh RB, de Lamballerie X, , Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies in the Mediterranean., Vector Borne Zoonotic Dis 2009 Oct; 9(5): 519-30.
• 2009
  Leparc-Goffart I, Baragatti M, Temmam S, Tuiskunen A, Moureau G, Charrel R, de Lamballerie X, , Development and validation of real-time one-step reverse transcription-PCR for the detection and typing of dengue viruses., J Clin Virol 2009 May; 45(1): 61-6.
• 2008
  Izri A, Temmam S, Moureau G, Hamrioui B, de Lamballerie X, Charrel RN, , Sandfly fever Sicilian virus, Algeria., Emerg Infect Dis 2008 May; 14(5): 795-7.
• 2007
  Charrel RN, Izri A, Temmam S, Delaunay P, Toga I, Dumon H, Marty P, de Lamballerie X, Parola P, , Cocirculation of 2 genotypes of Toscana virus, southeastern France., Emerg Infect Dis 2007 Mar; 13(3): 465-8.
• 2007
  Moureau G, Temmam S, Gonzalez JP, Charrel RN, Grard G, de Lamballerie X, A real-time RT-PCR method for the universal detection and identification of flaviviruses, Vector Borne Zoonotic Dis. 2007;7(4):467-77.
• 2007
  Emonet SF, Grard G, Brisbarre NM, Moureau GN, Temmam S, Charrel RN, de Lamballerie X, , Long PCR Product Sequencing (LoPPS): a shotgun-based approach to sequence long PCR products., Nat Protoc 2007 ; 2(2): 340-6.
• 2007
  Charrel RN, Fagbo S, Moureau G, Alqahtani MH, Temmam S, de Lamballerie X, , Alkhurma hemorrhagic fever virus in Ornithodoros savignyi ticks., Emerg Infect Dis 2007 Jan; 13(1): 153-5.
• 2006
  Charrel RN, Izri A, Temmam S, de Lamballerie X, Parola P, , Toscana virus RNA in Sergentomyia minuta files., Emerg Infect Dis 2006 Aug; 12(8): 1299-300.
• 2006
  Emonet S, Grard G, Brisbarre N, Moureau G, Temmam S, Charrel R, de Lamballerie X, , LoPPS: a long PCR product sequencing method for rapid characterisation of long amplicons., Biochem Biophys Res Commun 2006 Jun; 344(4): 1080-5.