• 2021
  Cheysson F, Brun-Buisson C, Opatowski L, Le Fouler L, Caserio-Schönemann C, Pontais I, Guillemot D, Watier L, , Outpatient antibiotic use attributable to viral acute lower respiratory tract infections during the cold season in France, 2010-2017., Int J Antimicrob Agents 2021 Jun; 57(6): 106339.
• 2021
  Smith DRM, Opatowski L, , COVID-19 containment measures and incidence of invasive bacterial disease., Lancet Digit Health 2021 Jun; 3(6): e331-e332.
• 2021
  Bastard J, Haenni M, Gay E, Glaser P, Madec JY, Temime L, Opatowski L, , Drivers of ESBL-producing Escherichia coli dynamics in calf fattening farms: A modelling study., One Health 2021 Jun; 12(): 100238.
• 2020
  Smith DRM, Duval A, Pouwels KB, Guillemot D, Fernandes J, Huynh BT, Temime L, Opatowski L, , , Optimizing COVID-19 surveillance in long-term care facilities: a modelling study., BMC Med 2020 12; 18(1): 386.
• 2020
  Opatowski L, Opatowski M, Vong S, Temime L, , A One-Health Quantitative Model to Assess the Risk of Antibiotic Resistance Acquisition in Asian Populations: Impact of Exposure Through Food, Water, Livestock and Humans., Risk Anal 2020 Oct; (): .
• 2020
  Nekkab N, Crépey P, Astagneau P, Opatowski L, Temime L, , Assessing the role of inter-facility patient transfer in the spread of carbapenemase-producing Enterobacteriaceae: the case of France between 2012 and 2015., Sci Rep 2020 09; 10(1): 14910.
• 2020
  Salje H, Tran Kiem C, Lefrancq N, Courtejoie N, Bosetti P, Paireau J, Andronico A, Hozé N, Richet J, Dubost CL, Le Strat Y, Lessler J, Levy-Bruhl D, Fontanet A, Opatowski L, Boelle PY, Cauchemez S, , Estimating the burden of SARS-CoV-2 in France., Science 2020 07; 369(6500): 208-211.
• 2020
  Temime L, Gustin MP, Duval A, Buetti N, Crépey P, Guillemot D, Thiébaut R, Vanhems P, Zahar JR, Smith DRM, Opatowski L, , A Conceptual Discussion About the Basic Reproduction Number of Severe Acute Respiratory Syndrome Coronavirus 2 in Healthcare Settings., Clin Infect Dis 2021 01; 72(1): 141-143.
• 2020
  Domenech de Cellès M, Campbell H, Borrow R, Taha MK, Opatowski L, , Transmissibility and pathogenicity of the emerging meningococcal serogroup W sequence type-11 complex South American strain: a mathematical modeling study., BMC Med 2020 Apr; 18(1): 109.
• 2020
  Bastard J, Andraud M, Chauvin C, Glaser P, Opatowski L, Temime L, Dynamics of livestock-associated methicillin resistant Staphylococcus aureus in pig movement networks: Insight from mathematical modeling and French data, Epidemics 2020 Feb;31:100389.
• 2019
  Alari A, Cheysson F, Le Fouler L, Lanotte P, , Varon E, Opatowski L, Guillemot D, Watier L, Association of Pneumococcal Conjugate Vaccine Coverage With Pneumococcal Meningitis: An Analysis of French Administrative Areas, 2001-2016, Am. J. Epidemiol. 2019 Aug;188(8):1466-1474.
• 2019
  Bonneault M, Andrianoelina VH, Herindrainy P, Rabenandrasana MAN, Garin B, Breurec S, Delarocque-Astagneau E, Guillemot D, Andrianirina ZZ, Collard JM, Huynh BT, Opatowski L, Transmission Routes of Extended-Spectrum Beta-Lactamase-Producing Enterobacteriaceae in a Neonatology Ward in Madagascar, Am. J. Trop. Med. Hyg. 2019 06;100(6):1355-1362.
• 2019
  Duval A, Obadia T, Boëlle PY, Fleury E, Herrmann JL, Guillemot D, Temime L, Opatowski L, , Close proximity interactions support transmission of ESBL-K. pneumoniae but not ESBL-E. coli in healthcare settings, PLoS Comput. Biol. 2019 05;15(5):e1006496.
• 2019
  Domenech de Cellès M, Arduin H, Lévy-Bruhl D, Georges S, Souty C, Guillemot D, Watier L, Opatowski L, Unraveling the seasonal epidemiology of pneumococcus, Proc. Natl. Acad. Sci. U.S.A. 2019 01;116(5):1802-1807.
• 2018
  Gao X, Huynh BT, Guillemot D, Glaser P, Opatowski L, Inference of Significant Microbial Interactions From Longitudinal Metagenomics Data, Front Microbiol 2018;9:2319.
• 2018
  Opatowski L, Baguelin M, Eggo RM, Influenza interaction with cocirculating pathogens and its impact on surveillance, pathogenesis, and epidemic profile: A key role for mathematical modelling, PLoS Pathog. 2018 02;14(2):e1006770.
• 2017
  Rosello A, Pouwels KB, Domenech DE Cellès M, VAN Kleef E, Hayward AC, Hopkins S, Robotham JV, Smieszek T, Opatowski L, Deeny SR, Seasonality of urinary tract infections in the United Kingdom in different age groups: longitudinal analysis of The Health Improvement Network (THIN), Epidemiol. Infect. 2018 01;146(1):37-45.
• 2017
  Opatowski L, Baguelin M, Eggo R, Influenza Interaction with Cocirculating Pathogens, and Its Impact on Surveillance, Pathogenesis and Epidemic Profile: A Key Role for Mathematical Modeling (accepted PLOS Pathogens), bioRxiv. 2017. doi: https://doi.org/10.1101/203265.
• 2017
  Chéreau F, Opatowski L, Tourdjman M, Vong S., Risk Assessment for Antibiotic Resistance in South-East Asia, BMJ 2017;358:j3393.
• 2017
  Domenech de Cellès M, Arduin H, Varon E, Souty C, Boëlle PY, Lévy-Bruhl D, van der Werf S, Soulary JC, Guillemot D, Watier L, Opatowski L, Characterizing and Comparing the Seasonality of Influenza-Like Illnesses and Invasive Pneumococcal Diseases Using Seasonal Waveforms, Am. J. Epidemiol. 2018 05;187(5):1029-1039.
• 2017
  Assab R, Nekkab N, Crépey P, Astagneau P, Guillemot D, Opatowski L, Temime L., Mathematical models of infection transmission in healthcare settings: recent advances from the use of network structured data., Curr Opin Infect Dis. 2017 Aug;30(4):410-418. doi: 10.1097/QCO.0000000000000390..
• 2017
  Arduin H, Domenech de Cellès M, Guillemot D, Watier L, Opatowski L., An agent-based model simulation of influenza interactions at the host level: insight into the influenza-related burden of pneumococcal infections, BMC Infect Dis. 2017 Jun 2;17(1):382. doi: 10.1186/s12879-017-2464-z.
• 2016
  Alari A, Chaussade H, Domenech De Cellès M, Le Fouler L, Varon E, Opatowski L, Guillemot D, Watier L., Impact of pneumococcal conjugate vaccines on pneumococcal meningitis cases in France between 2001 and 2014: a time series analysis., BMC Med. 2016 Dec 21;14(1):211. doi: 10.1186/s12916-016-0755-7..
• 2015
  de Cellès MD, Pons-Salort M, Varon E, Vibet MA, Ligier C, Letort V, Opatowski L, Guillemot D, Interaction of Vaccination and Reduction of Antibiotic Use Drives Unexpected Increase of Pneumococcal Meningitis., Sci Rep. 2015 Jun 11;5:11293. doi: 10.1038/srep11293.
• 2015
  Obadia T, Opatowski L, Temime L, Herrmann JL, Fleury É, Boëlle PY, Guillemot D, Interindividual Contacts and Carriage of Methicillin-Resistant Staphylococcus aureus: A Nested Case-Control Study, Infect Control Hosp Epidemiol 2015 Aug;36(8):922-9.
• 2015
  Obadia T, Silhol R, Opatowski L, Temime L, Legrand J, Thiébaut AC, Herrmann JL, Fleury É, Guillemot D, Boëlle PY; I-Bird Study Group, Detailed contact data and the dissemination of Staphylococcus aureus in hospitals, PLoS Comput Biol. 2015 Mar 19;11(3):e1004170. doi: 10.1371/journal.pcbi.1004170. eCollection 2015..
• 2014
  Jombart T, Aanensen DM, Baguelin M, Birrell P, Cauchemez S, Camacho A, Colijn C, Collins C, Cori A, Didelot X, Fraser C, Frost S, Hens N, Hugues J, Höhle M, Opatowski L, Rambaut A, Ratmann O, Soubeyrand S, Suchard MA, Wallinga J, Ypma R, Ferguson N., OutbreakTools: a new platform for disease outbreak analysis using the R software, Epidemics. 2014 Jun;7:28-34.
• 2014
  Pons-Salort M, Serra-Cobo J, Jay F, López-Roig M, Lavenir R, Guillemot D, Letort V, Bourhy H, Opatowski L, Insights into persistence mechanisms of a zoonotic virus in bat colonies using a multispecies metapopulation model, PLoS ONE 2014;9(4):e95610.
• 2013
  Opatowski L, Varon E, Dupont C, Temime L, van der Werf S, Gutmann L, Boëlle PY, Watier L, Guillemot D, Assessing pneumococcal meningitis association with viral respiratory infections and antibiotics: insights from statistical and mathematical models, Proc. Biol. Sci. 2013 Aug;280(1764):20130519.
• 2011
  Kardas-Sloma L, Boëlle PY, Opatowski L, Brun-Buisson C, Guillemot D, Temime L., Impact of antibiotic exposure patterns on selection of community-associated methicillin-resistant Staphylococcus aureus in hospital settings, Antimicrob Agents Chemother. 2011 Oct;55(10):4888-95..
• 2011
  Opatowski L, Fraser C, Griffin J, de Silva E, Van Kerkhove MD, Lyons EJ, Cauchemez S, Ferguson NM., Transmission characteristics of the 2009 H1N1 influenza pandemic: comparison of 8 Southern hemisphere countries., PLoS Pathog. 2011 Sep;7(9):e1002225.
• 2011
  Domenech de Cellès M, Opatowski L, Salomon J, Varon E, Carbon C, Boëlle PY, Guillemot D, Intrinsic epidemicity of Streptococcus pneumoniae depends on strain serotype and antibiotic susceptibility pattern, Antimicrob. Agents Chemother. 2011 Nov;55(11):5255-61.
• 2011
  Opatowski L, Guillemot D, Boëlle PY, Temime L., Contribution of mathematical modeling to the fight against bacterial antibiotic resistance, Curr Opin Infect Dis. 2011 Jun;24(3):279-87..
• 2010
  Kardas-Sloma L, Boëlle PY, Opatowski L, Guillemot D, Temime L., Antibiotic reduction campaigns do not necessarily decrease bacterial resistance: the example of methicillin-resistant Staphylococcus aureus, Antimicrob Agents Chemother. 2013 Sep;57(9):4410-6..
• 2010
  Opatowski L, Mandel J, Varon E, Boëlle PY, Temime L, Guillemot D., Antibiotic dose impact on resistance selection in the community: a mathematical model of beta-lactams and Streptococcus pneumoniae dynamics, Antimicrob Agents Chemother. 2010 Jun;54(6):2330-7.
• 2010
  Pons-Salort M, Letort V, Favre M, Heard I, Dervaux B, Opatowski L, Guillemot D., Exploring individual HPV coinfections is essential to predict HPV-vaccination impact on genotype distribution: a model-based approach, Vaccine. 2013 Feb 6;31(8):1238-45.
• 2010
  Temime L, Kardas L, Opatowski L, Brun-Buisson C, Boëll eP-Y. and Guillemot D., NOSOSIM: an agent-based model of pathogen circulation in a hospital ward, International Conference on Computational Science, ICCS 2010. Procedia Computer Science 1. 2010.
• 2009
  Temime L, Opatowski L, Pannet Y, Brun-Buisson C, Boëlle PY, Guillemot D., Peripatetic health-care workers as potential superspreaders, Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18420-5.
• 2008
  Temime L, Boelle PY, Opatowski L, Guillemot D., Impact of capsular switch on invasive pneumococcal disease incidence in a vaccinated population, PLoS One. 2008 Sep 19;3(9):e3244.
• 2008
  Opatowski L, Temime L, Varon E, Leclercq R, Drugeon H, Boëlle PY, Guillemot D., Antibiotic innovation may contribute to slowing the dissemination of multiresistant Streptococcus pneumoniae: the example of ketolides, PLoS One. 2008 May 7;3(5):e2089.
• 2006
  García-Serna R, Opatowski L, Mestres J., FCP: functional coverage of the proteome by structures, Bioinformatics. 2006 Jul 15;22(14):1792-3..