• 2025
  A. Barbier--Chebbah, C. L. Vestergaard, J. Masson, Information maximization for a broad variety of multi-armed bandit games, .
• 2025
  Maxime Lehman, Chloé Barré, Md Amit Hasan, Benjamin Flament, Sandra Autran, Neena Dhiman, Peter Soba, Jean-Baptiste Masson, Tihana Jovanic, Neural circuits underlying context-dependent competition between defensive actions in Drosophila larvae, Nature Communications, 2025, 16 (1), pp.1120. ⟨10.1038/s41467-025-56185-2⟩.
• 2025
  Lehman M, Barré C, Hasan MA, Flament B, Autran S, Dhiman N, Soba P, Masson JB, Jovanic T, Neural circuits underlying context-dependent competition between defensive actions in Drosophila larvae., Nat Commun 2025 Jan; 16(1): 1120.
• 2025
  Blanc T, Godard C, Grevent D, El Beheiry M, Salomon LJ, Hajj B, Masson JB, Photorealistic rendering of fetal faces from raw magnetic resonance imaging data., Ultrasound Obstet Gynecol 2025 Jan; (): .
• 2024
  Payette K, Steger C, Licandro R, De Dumast P, Li HB, Barkovich M, Li L, Dannecker M, Chen C, Ouyang C, McConnell N, Miron A, Li Y, Uus A, Grigorescu I, Gilliland PR, Siddiquee MMR, Xu D, Myronenko A, Wang H, Huang Z, Ye J, Alenya M, Comte V, Camara O, Masson JB, Nilsson A, Godard C, Mazher M, Qayyum A, Gao Y, Zhou H, Gao S, Fu J, Dong G, Wang G, Rieu Z, Yang H, Lee M, Plotka S, Grzeszczyk MK, Sitek A, Daza LV, Usma S, Arbelaez P, Lu W, Zhang W, Liang J, Valabregue R, Joshi AA, Nayak KN, Leahy RM, Wilhelmi L, Dandliker A, Ji H, Gennari AG, Jakovcic A, Klaic M, Adzic A, Markovic P, Grabaric G, Kasprian G, Dovjak G, Rados M, Vasung L, Cuadra MB, Jakab A, Multi-Center Fetal Brain Tissue Annotation (FeTA) Challenge 2022 Results., IEEE Trans Med Imaging 2024 Oct; PP(): .
• 2024
  Gandara L, Jacoby R, Laurent F, Spatuzzi M, Vlachopoulos N, Borst NO, Ekmen G, Potel CM, Garrido-Rodriguez M, Böhmert AL, Misunou N, Bartmanski BJ, Li XC, Kutra D, Hériché JK, Tischer C, Zimmermann-Kogadeeva M, Ingham VA, Savitski MM, Masson JB, Zimmermann M, Crocker J, Pervasive sublethal effects of agrochemicals on insects at environmentally relevant concentrations., Science 2024 Oct; 386(6720): 446-453.
• 2024
  Chao Yu, Maximilian Richly, Thi Thuy Hoang, Mohammed El Beheiry, Silvan Türkcan, Jean-Baptiste Masson, Antigoni Alexandrou, Cedric I Bouzigues, Confinement energy landscape classification reveals membrane receptor nano-organization mechanisms., Biophysical Journal, 2024, 123 (13), pp.1882-1895. ⟨10.1016/j.bpj.2024.06.001⟩.
• 2024
  Barbier-Chebbah A, Vestergaard CL, Masson JB, Approximate information for efficient exploration-exploitation strategies., Phys Rev E 2024 May; 109(5): L052105.
• 2024
  Obara CJ, Nixon-Abell J, Moore AS, Riccio F, Hoffman DP, Shtengel G, Xu CS, Schaefer K, Pasolli HA, Masson JB, Hess HF, Calderon CP, Blackstone C, Lippincott-Schwartz J, Motion of VAPB molecules reveals ER-mitochondria contact site subdomains., Nature 2024 Jan; (): .
• 2023
  Alex Barbier-Chebbah, Christian L. Vestergaard, Jean-Baptiste Masson, Approximate information for efficient exploration-exploitation strategies Information approximée pour des stratégies d’exploration-exploitation efficaces, Physical Review E , 2023, 109 (5), pp.L052105. ⟨10.1103/PhysRevE.109.L052105⟩.
• 2023
  Bertelli F, Raimondi F, Godard C, Bergonzoni E, Cattapan C, Gastino E, Galliotto F, Boddaert N, El Beheiry M, Masson JB, Guariento A, Vida VL, Fast-track virtual reality software to facilitate 3-dimensional reconstruction in congenital heart disease., Interdiscip Cardiovasc Thorac Surg 2023 Jun; 36(6): .
• 2023
  Verdier H, Laurent F, Cassé A, Vestergaard CL, Specht CG, Masson JB, Simulation-based inference for non-parametric statistical comparison of biomolecule dynamics., PLoS Comput Biol 2023 Feb; 19(2): e1010088.
• 2023
  Mohamed El Beheiry, Bassam Hajj, Jean-Baptiste Masson, Maxime Dahan, High-Speed Localization Microscopy and Single-Particle Tracking (2nd edition), Encyclopedia of Cell Biology, 2023, pp.152-160. ⟨10.1016/B978-0-12-821618-7.00118-8⟩.
• 2022
  Hippolyte Verdier, François Laurent, Alhassan Cassé, Christian Vestergaard, Jean-Baptiste Masson, Variational inference of fractional Brownian motion with linear computational complexity, Physical Review E , 2022, 106, pp.055311. ⟨10.1103/PhysRevE.106.055311⟩.
• 2022
  Croteau-Chonka EC, Clayton MS, Venkatasubramanian L, Harris SN, Jones BMW, Narayan L, Winding M, Masson JB, Zlatic M, Klein KT, , High-throughput automated methods for classical and operant conditioning of Drosophila larvae., Elife 2022 Oct; 11(): .
• 2022
  Laurent F, Verdier H, Duval M, Serov A, Vestergaard CL, Masson JB, , TRamWAy: mapping physical properties of individual biomolecule random motion in large-scale single-particle tracking experiments., Bioinformatics 2022 May; 38(11): 3149-3150.
• 2022
  Sailor KA, Agoranos G, López-Manzaneda S, Tada S, Gillet-Legrand B, Guerinot C, Masson JB, Vestergaard CL, Bonner M, Gagnidze K, Veres G, Lledo PM, Cartier N, , Hematopoietic stem cell transplantation chemotherapy causes microglia senescence and peripheral macrophage engraftment in the brain., Nat Med 2022 Mar; 28(3): 517-527.
• 2022
  Masson JB, Counting biomolecules with Bayesian inference., Nat Comput Sci 2022 Feb; 2(2): 74-75.
• 2022
  Corentin Guérinot, Valentin Marcon, Charlotte Godard, Thomas Blanc, Hippolyte Verdier, Guillaume Planchon, Francesca Raimondi, Nathalie Boddaert, Mariana Alonso, Kurt Sailor, Pierre-Marie Lledo, Bassam Hajj, Mohamed El Beheiry, Jean-Baptiste Masson, New Approach to Accelerated Image Annotation by Leveraging Virtual Reality and Cloud Computing, Front. Bioinform., 31 January 2022.
• 2022
  Corentin Guérinot, Valentin Marcon, Charlotte Godard, Thomas Blanc, Hippolyte Verdier, Guillaume Planchon, Francesca Raimondi, Nathalie Boddaert, Mariana Alonso, Kurt Sailor, Pierre-Marie Lledo, Bassam Hajj, Mohamed El Beheiry, Jean-Baptiste Masson, New Approach to Accelerated Image Annotation by Leveraging Virtual Reality and Cloud Computing., Frontiers in Bioinformatics, 2022, 1, pp.777101. ⟨10.3389/fbinf.2021.777101⟩.
• 2022
  Valades-Cruz CA, Leconte L, Fouche G, Blanc T, Van Hille N, Fournier K, Laurent T, Gallean B, Deslandes F, Hajj B, Faure E, Argelaguet F, Trubuil A, Isenberg T, Masson JB, Salamero J, Kervrann C, , Challenges of intracellular visualization using virtual and augmented reality., Front Bioinform 2022 ; 2(): 997082.
• 2021
  El Beheiry M, Gaillard T, Girard N, Darrigues L, Osdoit M, Feron JG, Sabaila A, Laas E, Fourchotte V, Laki F, Lecuru F, Couturaud B, Binder JP, Masson JB, Reyal F, Malhaire C, , Breast Magnetic Resonance Image Analysis for Surgeons Using Virtual Reality: A Comparative Study., JCO Clin Cancer Inform 2021 Oct; 5(): 1127-1133.
• 2021
  Dray N, Mancini L, Binshtok U, Cheysson F, Supatto W, Mahou P, Bedu S, Ortica S, Than-Trong E, Krecsmarik M, Herbert S, Masson JB, Tinevez JY, Lang G, Beaurepaire E, Sprinzak D, Bally-Cuif L, Dynamic spatiotemporal coordination of neural stem cell fate decisions occurs through local feedback in the adult vertebrate brain., Cell Stem Cell 2021 Aug; 28(8): 1457-1472.e12.
• 2021
  Hippolyte Verdier, Maxime Duval, François Laurent, Alhassan Cassé, Christian L Vestergaard, Jean-Baptiste Masson, Learning physical properties of anomalous random walks using graph neural networks, J. Phys. A: Math. Theor. 54 234001.
• 2021
  Raimondi F, Vida V, Godard C, Bertelli F, Reffo E, Boddaert N, El Beheiry M, Masson JB, , Fast-track virtual reality for cardiac imaging in congenital heart disease., J Card Surg 2021 Mar; (): .
• 2021
  Laas E, El Beheiry M, Masson JB, Malhaire C, , Partial breast resection for multifocal lower quadrant breast tumour using virtual reality., BMJ Case Rep 2021 Mar; 14(3): .
• 2021
  Blanc T, Verdier H, Regnier L, Planchon G, Guérinot C, El Beheiry M, Masson JB, Hajj B, , Towards Human in the Loop Analysis of Complex Point Clouds: Advanced Visualizations, Quantifications, and Communication Features in Virtual Reality., Front Bioinform 2021 ; 1(): 775379.
• 2020
  Bouaoud J, El Beheiry M, Jablon E, Schouman T, Bertolus C, Picard A, Masson JB, Khonsari RH, , DIVA, a 3D virtual reality platform, improves undergraduate craniofacial trauma education., J Stomatol Oral Maxillofac Surg 2020 Sep; (): .
• 2020
  Blanc T, El Beheiry M, Caporal C, Masson JB, Hajj B, , Genuage: visualize and analyze multidimensional single-molecule point cloud data in virtual reality., Nat. Methods 2020 Sep; (): .
• 2020
  El Beheiry M, Godard C, Caporal C, Marcon V, Ostertag Ć, Sliti O, Doutreligne Ś, Fournier S, Hajj B, Dahan M, Masson JB, , DIVA: Natural Navigation inside 3D Images Using Virtual Reality., J. Mol. Biol. 2020 Jun; (): .
• 2020
  Serov AS, Laurent F, Floderer C, Perronet K, Favard C, Muriaux D, Westbrook N, Vestergaard CL, Masson JB, , Statistical Tests for Force Inference in Heterogeneous Environments., Sci Rep 2020 03; 10(1): 3783.
• 2020
  Masson JB, Laurent F, Cardona A, Barré C, Skatchkovsky N, Zlatic M, Jovanic T, , Identifying neural substrates of competitive interactions and sequence transitions during mechanosensory responses in Drosophila., PLoS Genet 2020 02; 16(2): e1008589.
• 2019
  Laurent F, Floderer C, Favard C, Muriaux D, Masson JB, Vestergaard CL, Mapping spatio-temporal dynamics of single biomolecules in living cells, Phys. Biol. 2019 Nov;17(1):015003.
• 2019
  El Beheiry M, Doutreligne S, Caporal C, Ostertag C, Dahan M, Masson JB, Virtual Reality: Beyond Visualization, J. Mol. Biol. 2019 Feb;.
• 2018
  Floderer C, Masson JB, Boilley E, Georgeault S, Merida P, El Beheiry M, Dahan M, Roingeard P, Sibarita JB, Favard C, Muriaux D, Single molecule localisation microscopy reveals how HIV-1 Gag proteins sense membrane virus assembly sites in living host CD4 T cells, Sci Rep 2018 Nov;8(1):16283.
• 2017
  Jacob V, Monsempès C, Rospars JP, Masson JB, Lucas P, Olfactory coding in the turbulent realm, PLoS Comput. Biol. 2017 Dec;13(12):e1005870.
• 2017
  Remorino A, De Beco S, Cayrac F, Di Federico F, Cornilleau G, Gautreau A, Parrini MC, Masson JB, Dahan M, Coppey M, Gradients of Rac1 Nanoclusters Support Spatial Patterns of Rac1 Signaling, Cell Rep 2017 Nov;21(7):1922-1935.
• 2016
  Jovanic T, Schneider-Mizell CM, Shao M, Masson JB, Denisov G, Fetter RD, Mensh BD, Truman JW, Cardona A, Zlatic M, , Competitive Disinhibition Mediates Behavioral Choice and Sequences in Drosophila., Cell 2016 Oct; 167(3): 858-870.e19.
• 2016
  Akin EJ, Solé L, Johnson B, Beheiry ME, Masson JB, Krapf D, Tamkun MM, Single-Molecule Imaging of Nav1.6 on the Surface of Hippocampal Neurons Reveals Somatic Nanoclusters, Biophys. J. 2016 Sep;111(6):1235-47.
• 2016
  El Beheiry M, Türkcan S, Richly MU, Triller A, Alexandrou A, Dahan M, Masson JB, A Primer on the Bayesian Approach to High-Density Single-Molecule Trajectories Analysis, Biophys. J. 2016 Mar;110(6):1209-15.
• 2015
  Knight SC, Xie L, Deng W, Guglielmi B, Witkowsky LB, Bosanac L, Zhang ET, El Beheiry M, Masson JB, Dahan M, Liu Z, Doudna JA, Tjian R, Dynamics of CRISPR-Cas9 genome interrogation in living cells, Science 2015 Nov;350(6262):823-6.
• 2015
  El Beheiry M, Dahan M, Masson JB, InferenceMAP: mapping of single-molecule dynamics with Bayesian inference, Nat. Methods 2015 Jul;12(7):594-5.
• 2015
  Siqi Zhang, Dominique Martinez and Jean-Baptiste Masson, Multi-robot searching with sparse binary cues and limited space perception, Front. Robot. AI 2:12. doi: 10.3389/frobt.2015.00012.
• 2014
  Martinez D, Arhidi L, Demondion E, Masson JB, Lucas P, Using insect electroantennogram sensors on autonomous robots for olfactory searches, J Vis Exp 2014 Aug;(90):e51704.
• 2014
  Masson JB, Dionne P, Salvatico C, Renner M, Specht CG, Triller A, Dahan M, Mapping the energy and diffusion landscapes of membrane proteins at the cell surface using high-density single-molecule imaging and Bayesian inference: application to the multiscale dynamics of glycine receptors in the neuronal membrane, Biophys. J. 2014 Jan;106(1):74-83.
• 2013
  Türkcan S, Masson JB, Bayesian decision tree for the classification of the mode of motion in single-molecule trajectories, PLoS ONE 2013;8(12):e82799.
• 2013
  Richly MU, Türkcan S, Le Gall A, Fiszman N, Masson JB, Westbrook N, Perronet K, Alexandrou A, Calibrating optical tweezers with Bayesian inference, Opt Express 2013 Dec;21(25):31578-90.
• 2013
  Masson JB, Olfactory searches with limited space perception, Proc. Natl. Acad. Sci. U.S.A. 2013 Jul;110(28):11261-6.
• 2013
  Türkcan S, Richly MU, Alexandrou A, Masson JB, Probing membrane protein interactions with their lipid raft environment using single-molecule tracking and Bayesian inference analysis, PLoS ONE 2013;8(1):e53073.
• 2012
  Sarris M, Masson JB, Maurin D, Van der Aa LM, Boudinot P, Lortat-Jacob H, Herbomel P, Inflammatory chemokines direct and restrict leukocyte migration within live tissues as glycan-bound gradients, Curr. Biol. 2012 Dec;22(24):2375-82.
• 2012
  Masson JB, Gallot G, Diffraction from a subwavelength elliptic aperture: analytic approximate aperture fields, J Opt Soc Am A Opt Image Sci Vis 2012 Sep;29(9):2005-14.
• 2012
  Türkcan S, Masson JB, Casanova D, Mialon G, Gacoin T, Boilot JP, Popoff MR, Alexandrou A, Observing the confinement potential of bacterial pore-forming toxin receptors inside rafts with nonblinking Eu(3+)-doped oxide nanoparticles, Biophys. J. 2012 May;102(10):2299-308.
• 2012
  Türkcan S, Alexandrou A, Masson JB, A Bayesian inference scheme to extract diffusivity and potential fields from confined single-molecule trajectories, Biophys. J. 2012 May;102(10):2288-98.
• 2012
  Masson JB, Voisinne G, Wong-Ng J, Celani A, Vergassola M, Noninvasive inference of the molecular chemotactic response using bacterial trajectories, Proc. Natl. Acad. Sci. U.S.A. 2012 Jan;109(5):1802-7.
• 2010
  Voisinne G, Alexandrou A, Masson JB, Quantifying biomolecule diffusivity using an optimal Bayesian method, Biophys. J. 2010 Feb;98(4):596-605.
• 2009
  Masson JB, Podzorov A, Gallot G, Extended Fano model of Extraordinary Electromagnetic Transmission through subwavelength hole arrays in the terahertz domain, Opt Express 2009 Aug;17(17):15280-91.
• 2008
  Baroud CN, Wang XC, Masson JB, Collective behavior during the exit of a wetting liquid through a network of channels, J Colloid Interface Sci 2008 Oct;326(2):445-50.
• 2008
  Masson JB, Podzorov A, Gallot G, Anomalies in the disappearance of the extraordinary electromagnetic transmission in subwavelength hole arrays, Opt Express 2008 Mar;16(7):4719-30.
• 2007
  Treuffet J, Kubarych KJ, Lambry JC, Pilet E, Masson JB, Martin JL, Vos MH, Joffre M, Alexandrou A, Direct observation of ligand transfer and bond formation in cytochrome c oxidase by using mid-infrared chirped-pulse upconversion, Proc. Natl. Acad. Sci. U.S.A. 2007 Oct;104(40):15705-10.
• 2007
  Masson JB, Gallot G, True near field versus contrast near field imaging. II. imaging with a probe, Opt Express 2007 Mar;15(6):3078-84.
• 2006
  Masson JB, Gallot G, True near field versus contrast near field imaging, Opt Express 2006 Nov;14(24):11566-74.
• 2006
  Masson JB, Sauviat MP, Martin JL, Gallot G, Ionic contrast terahertz near-field imaging of axonal water fluxes, Proc. Natl. Acad. Sci. U.S.A. 2006 Mar;103(13):4808-12.
• 2005
  Sauviat MP, Boydron-Le Garrec R, Masson JB, Lewis RL, Vernoux JP, Molgó J, Laurent D, Benoit E, Mechanisms involved in the swelling of erythrocytes caused by Pacific and Caribbean ciguatoxins, Blood Cells Mol. Dis. 2006 Jan-Feb;36(1):1-9.
• 1992
  Derksen EJ, van Dieren EB, Roos JC, van Lingen A, den Hollander W, Teule GJ, Meijer S, Kinetics and dosimetry of iodine-131-labelled antibody fragments after local administration in patients with rectal cancer, Eur J Nucl Med 1992;19(7):492-6.