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Connexions
Membres
Marc Monot
Responsable de Plateforme
Responsable
Projets
Services
Equipments: Shared Room
The objectif of this service is to simplify access to the autonomous use of our machines
Training: Next Generation Sequencing
The objective is to support you in the preparation of NGS experiment.
Équipements
NextSeq2000 • Illumina • (Autonomous)
Description The NextSeq 2000 is a medium throughput NGS sequencer using the same types of libraries as other Illumina sequencers. Its multiple cassettes make it very flexible (virus -> human). Usage For autonomous use […]
Qubit • Invitrogen • (Autonomous)
Description Qubit doses nucleic acids in a sensitive and specific way: accurately measures the concentration of nucleic acids, whether they are double-stranded DNA, single-stranded DNA, total RNA or microRNA, even in the presence of […]
COVARIS • E220 • (Autonomous)
Description Covaris is recognized as the reference for DNA fragmentation. Adaptive Focused Acoustics technology (AFA™) allows precise control of the mechanical fragmentation of DNA. In addition, this process is isothermal, so it does not […]
MiniSeq • Illumina • (Autonomous)
MiniSeq NGS low throughput Description The MiniSeq is a low throughput NGS sequencer using the same types of libraries as other Illumina sequencers. Its multiple cassettes make it flexible. Usage For autonomous […]
iSeq100 • Illumina • (Autonomous)
ISeq 100 Description The ISeq 100 is a low output NGS sequencer using the same types of libraries as the other Illumina sequencers. It is particularly suitable for WGS […]
Publications
Télécharger-
2022JC Polyomavirus whole genome sequencing at the single molecule level reveals emerging neurotropic populations in Progressive Multifocal Leucoencephalopathy, J. Infect. Dis..
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2021Investigating the role of the carbon storage regulator A (CsrA) Leptospira spp., PLoS One . 2021 Dec 13;16(12):e0260981.
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2021Rapid identification of methylase specificity (RIMS-seq) jointly identifies methylated motifs and generates shotgun sequencing of bacterial genomes., Nucleic Acids Res 2021 11; 49(19): e113.
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2021How Did Institut Pasteur’s NGS Core Facility, Biomics, Manage the Coronavirus Disease 2019 Crisis?, J Biomol Tech 2021 07; 32(2): 50-56.
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2021RNase R is associated in a functional complex with the RhpA DEAD-box RNA helicase in Helicobacter pylori., Nucleic Acids Res 2021 49:5249-5264.
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2021Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution., Genome Res 2021 Jan; (): .
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2021Broad spectrum compounds targeting early stages of RABV infection, Antiviral Res 188 (2021) 105016.
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2020SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis., BMC Bioinformatics 2020 Aug; 21(1): 345.
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2020Differential DNA methylation in experienced meditators after an intensive day of mindfulness-based practice: Implications for immune-related pathways., Brain Behav. Immun. 2020 Feb; 84(): 36-44.
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2019IFN-Stimulated Genes in Zebrafish and Humans Define an Ancient Arsenal of Antiviral Immunity., J. Immunol. 2019 12; 203(12): 3361-3373.
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