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Olaya Rendueles-Garcia (PI)
Capsules are the outermost layer of some bacteria and the first contact between the cell and its environment. Our previous research showed that capsulated bacteria are better colonizers and are dominant in most environments […]
Eduardo Rocha (PI)
Prokaryotes evolve rapidly new functionalities by horizontal gene transfer delivered by mobile genetic elements (MGE). MGE increase relatedness between individuals and thereby might also promote the establishment of microbial social networks. Many studies have […]
Eduardo Rocha (PI)
CapsuleFinder is a program that detects capsule systems with high accuracy in proteic sequences. It is based on the use of HMM profiles for the detection of the essential proteins of capsule biogenesis and requires computational models describing […]
Since 2020– Member of the CID27 of the National Research Committee (CoNRS)
Since 2019 – Co-Chair of the French Society of Microbiology: Section Biodiversity & Evolution.
Since 2019 –Group Leader in Pasteur Institute in the Microbial Evolutionary Genomics lab.
2018– Habilitation in Biology (U Paris Sorbonne, Paris).
Since 2018 – Junior researcher (CR) at the UMR3525 CNRS in Pasteur Institute.
2015-2017- FRM fellow, Postdoc @ Microbial Evolutionary Genomics lab, in Institut Pasteur under the supervision of Eduardo Rocha.
2012-2015 – EMBO Fellow, Postdoc @ Evolutionary Biology group, Velicer lab, (ETH Zürich, Switzerland)
2008-2011– PhD inMicrobiology (U Diderot-Paris VII, France), in Institut Pasteur under the supervision of Jean Marc Ghigo.
2007- MSc in Clinical Microbiology (U Oviedo, Spain)
2021Nutrient conditions are primary drivers of bacterial capsule maintenance in Klebsiella, Proc. R. Soc. B.288:20202876.
2021Mining zebrafish microbiota reveals key community-level resistance against fish pathogen infection., ISME J 2021 Mar; 15(3): 702-719.
2020Modular prophage interactions driven by capsule serotype select for capsule loss under phage predation, ISME J (2020). https://doi.org/10.1038/s41396-020-0726-z.
2020Deciphering the role of the capsule of Klebsiella pneumoniae during pathogenesis: A cautionary tale, Mol Microbiol 2020.
2018Genetic exchanges are more frequent in bacteria encoding capsules, PLoS Genet. 2018 12;14(12):e1007862.
2018Kin discrimination and outer membrane exchange in Myxococcus xanthus: A comparative analysis among natural isolates, Mol. Ecol. 2018 Jun;.
2017Abundance and co-occurrence of extracellular capsules increase environmental breadth: Implications for the emergence of pathogens, PLoS Pathog. 2017 Jul;13(7):e1006525.
2017Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain., Nat Commun 2017 05; 8(): 15483.
2016Evolution by flight and fight: diverse mechanisms of adaptation by actively motile microbes, ISME J 2017 02;11(2):555-568.
2016Genomic epidemiology and global diversity of the emerging bacterial pathogen Elizabethkingia anophelis, Sci Rep 2016;6:30379.
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