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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Clinical Research Nurse
  • Clinician Researcher
  • Department Manager
  • Dual-education Student
  • Full Professor
  • Honorary Professor
  • Lab assistant
  • Master Student
  • MD-PhD Student
  • Medical Staff
  • Non-permanent Researcher
  • Nursing Staff
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Prize
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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Scientific Fields
Diseases
Organisms
Applications
Technique
Starting Date
01
Jul 2024
Keywords
5 Keywords
Status
Ongoing
Members
4
Structures
5

About

The Spirochase website is an easy-to-navigate portal to all reference proteomes within the Spirochaetes phylum.
Here, proteins are organized into orthologous groups (OGs), each with a unique identifier and annotation. With Spirochase, you can easily find answers to questions like: Is my protein found in spirochetes? Is it ancestral to the entire phylum? How is it distributed across the phylogeny?
You can also explore the data directly on the Data page or dive into the latest phylogeny of Spirochaetota on the Tree page. Learn more about what an OG is in omabrowser
For details on how the data was generated, refer to the study by Huete SG et al. 2025, available here (PrePrint) .


Go to Spirochase website !

Possible actions :

  • Perform a BLAST search for your protein of interest against the reference proteomes of Spirochaetes . This will allow you to identify the OG number of your protein and find its distribution in the phylum.
  • Find out the latest updated phylogeny of the phylum Spirochaetes and explore its main genera: Leptospira spp., Borrelia spp., Treponema spp., etc.
  • Explore the latest annotations of the reference proteomes in the Spirochaetes phylum, selecting your groups of interest and the main functions as COG categories.

Fundings