Timeline

Thomas Obadia

Research Engineer

10 Jan 2025

publication

Epidemiology and Prognostic Factors Associated With Mold-Positive Blood Cultures: 10-Year Data From a French Prospective Surveillance Program (2012–2022)

01 Oct 2024

publication

Epidemiology and prognostic factors of mucormycosis in France (2012-2022): a cross-sectional study nested in a prospective surveillance programme.

22 Mar 2024

publication

Caveolin-1 protects endothelial cells from extensive expansion of transcellular tunnel by stiffening the plasma membrane.

12 Mar 2024

publication

Comparing malaria risk exposure in rural Cambodia population using GPS tracking and questionnaires.

15 Feb 2024

publication

Using serological diagnostics to characterize remaining high-incidence pockets of malaria in forest-fringe Cambodia.

09 Feb 2024

publication

Evaluating vector competence for Yellow fever in the Caribbean.

08 Dec 2023

project

PvSTATEM: Serological testing & treatment of vivax malaria

19 Sep 2023

publication

Case Series of Primaquine-Induced Haemolytic Events in Controlled Trials with G6PD Screening.

17 Jul 2023

course

Bioinformatics program for PhD students 2023 2024

01 Jun 2023

publication

Accelerating towards P. vivax elimination with a novel serological test-and-treat strategy: a modelling case study in Brazil.

02 Sep 2022

news

New publication on Zika virus

02 Aug 2022

publication

Zika vector competence data reveals risks of outbreaks: the contribution of the European ZIKAlliance project.

11 Jul 2022

course

Bioinformatics program for PhD students 2022-2023

21 Jun 2022

publication

Plasmodium vivax malaria serological exposure markers: Assessing the degree and implications of cross-reactivity with P. knowlesi.

28 Apr 2022

publication

Impact of temperature on dengue and chikungunya transmission by the mosquito Aedes albopictus.

18 Mar 2022

publication

Developing sero-diagnostic tests to facilitate Plasmodium vivax Serological Test-and-Treat approaches: modeling the balance between public health impact and overtreatment.

01 Jan 2022

publication

Mobility evaluation by GPS tracking in a rural, low-income population in Cambodia.

16 Nov 2021

publication

Kinetics of the Severe Acute Respiratory Syndrome Coronavirus 2 Antibody Response and Serological Estimation of Time Since Infection.

01 Aug 2021

publication

Identification of the asymptomatic Plasmodium falciparum and Plasmodium vivax gametocyte reservoir under different transmission intensities.

01 Apr 2021

publication

Estimated impact of tafenoquine for Plasmodium vivax control and elimination in Brazil: A modelling study.

22 Feb 2021

publication

Single-cell RNA sequencing reveals developmental heterogeneity among Plasmodium berghei sporozoites.

19 Nov 2020

publication

Forest malaria in Cambodia: the occupational and spatial clustering of Plasmodium vivax and Plasmodium falciparum infection risk in a cross-sectional survey in Mondulkiri province, Cambodia.

16 Nov 2020

publication

Risk of yellow fever virus transmission in the Asia-Pacific region.

24 Sep 2020

course

Bioinformatics program for PhD students 2020-2021

09 Jun 2020

publication

Plasmodium vivax spleen-dependent genes encode antigens associated with cytoadhesion and clinical protection.

11 May 2020

publication

Development and validation of serological markers for detecting recent Plasmodium vivax infection.

01 Apr 2020

publication

Large-scale genome mining allows identification of neutral polymorphisms and novel resistance mutations in genes involved in Candida albicans resistance to azoles and echinocandins.

30 Jan 2020

publication

Author Correction: Measuring dynamic social contacts in a rehabilitation hospital: effect of wards, patient and staff characteristics.

09 Dec 2019

publication

Differential impact of malaria control interventions on P. falciparum and P. vivax infections in young Papua New Guinean children

28 Nov 2019

publication

Estimating the risk of arbovirus transmission in Southern Europe using vector competence data

07 Nov 2019

publication

Development and validation of a Bayesian survival model for inclusion body myositis

30 May 2019

publication

Close proximity interactions support transmission of ESBL-K. pneumoniae but not ESBL-E. coli in healthcare settings

15 Nov 2018

publication

Bacterial colonization of healthcare workers’ mobile phones in the ICU and effectiveness of sanitization

19 Jul 2018

course

Introduction to Data Analysis

19 Jul 2018

course

Introduction to Data Analysis

28 Mar 2018

team

Expertise group : Stats

26 Jan 2018

publication

Measuring dynamic social contacts in a rehabilitation hospital: effect of wards, patient and staff characteristics

23 Sep 2017

publication

Sustained Malaria Control Over an 8-Year Period in Papua New Guinea: The Challenge of Low-Density Asymptomatic Plasmodium Infections

25 Jan 2017

project

I-BIRD: Individual Based Investigation of Resistance Dissemination

30 Dec 2016

publication

Infectivity of symptomatic and asymptomatic Plasmodium vivax infections to a Southeast Asian vector, Anopheles dirus

26 Jun 2015

team

Bioinformatics and Biostatistics HUB

20 Apr 2015

publication

Interindividual Contacts and Carriage of Methicillin-Resistant Staphylococcus aureus: A Nested Case-Control Study

19 Mar 2015

publication

Detailed contact data and the dissemination of Staphylococcus aureus in hospitals

06 Jan 2014

publication

Evaluation of a 5-day education programme in type 1 diabetes: achieving individual targets with a patient-centred approach

16 Jul 2013

publication

The GAG database: a new resource to gather genomic annotation cross-references

18 Dec 2012

publication

A little guide for advanced search:

Epidemiology and Prognostic Factors Associated With Mold-Positive Blood Cultures: 10-Year Data From a French Prospective Surveillance Program (2012–2022)

Epidemiology and prognostic factors of mucormycosis in France (2012-2022): a cross-sectional study nested in a prospective surveillance programme.

Caveolin-1 protects endothelial cells from extensive expansion of transcellular tunnel by stiffening the plasma membrane.

Comparing malaria risk exposure in rural Cambodia population using GPS tracking and questionnaires.

Using serological diagnostics to characterize remaining high-incidence pockets of malaria in forest-fringe Cambodia.

Evaluating vector competence for Yellow fever in the Caribbean.

PvSTATEM: Serological testing & treatment of vivax malaria

Case Series of Primaquine-Induced Haemolytic Events in Controlled Trials with G6PD Screening.

Bioinformatics program for PhD students 2023 2024

Accelerating towards P. vivax elimination with a novel serological test-and-treat strategy: a modelling case study in Brazil.

New publication on Zika virus

Zika vector competence data reveals risks of outbreaks: the contribution of the European ZIKAlliance project.

Bioinformatics program for PhD students 2022-2023

Plasmodium vivax malaria serological exposure markers: Assessing the degree and implications of cross-reactivity with P. knowlesi.

Impact of temperature on dengue and chikungunya transmission by the mosquito Aedes albopictus.

Developing sero-diagnostic tests to facilitate Plasmodium vivax Serological Test-and-Treat approaches: modeling the balance between public health impact and overtreatment.

Mobility evaluation by GPS tracking in a rural, low-income population in Cambodia.

Kinetics of the Severe Acute Respiratory Syndrome Coronavirus 2 Antibody Response and Serological Estimation of Time Since Infection.

Identification of the asymptomatic Plasmodium falciparum and Plasmodium vivax gametocyte reservoir under different transmission intensities.

Estimated impact of tafenoquine for Plasmodium vivax control and elimination in Brazil: A modelling study.

Single-cell RNA sequencing reveals developmental heterogeneity among Plasmodium berghei sporozoites.

Forest malaria in Cambodia: the occupational and spatial clustering of Plasmodium vivax and Plasmodium falciparum infection risk in a cross-sectional survey in Mondulkiri province, Cambodia.

Risk of yellow fever virus transmission in the Asia-Pacific region.

Bioinformatics program for PhD students 2020-2021

Plasmodium vivax spleen-dependent genes encode antigens associated with cytoadhesion and clinical protection.

Development and validation of serological markers for detecting recent Plasmodium vivax infection.

Large-scale genome mining allows identification of neutral polymorphisms and novel resistance mutations in genes involved in Candida albicans resistance to azoles and echinocandins.

Author Correction: Measuring dynamic social contacts in a rehabilitation hospital: effect of wards, patient and staff characteristics.

Differential impact of malaria control interventions on P. falciparum and P. vivax infections in young Papua New Guinean children

Estimating the risk of arbovirus transmission in Southern Europe using vector competence data

Development and validation of a Bayesian survival model for inclusion body myositis

Close proximity interactions support transmission of ESBL-K. pneumoniae but not ESBL-E. coli in healthcare settings

Bacterial colonization of healthcare workers’ mobile phones in the ICU and effectiveness of sanitization

Introduction to Data Analysis

Introduction to Data Analysis

Expertise group : Stats

Measuring dynamic social contacts in a rehabilitation hospital: effect of wards, patient and staff characteristics

Sustained Malaria Control Over an 8-Year Period in Papua New Guinea: The Challenge of Low-Density Asymptomatic Plasmodium Infections

I-BIRD: Individual Based Investigation of Resistance Dissemination

Infectivity of symptomatic and asymptomatic Plasmodium vivax infections to a Southeast Asian vector, Anopheles dirus

Bioinformatics and Biostatistics HUB

Interindividual Contacts and Carriage of Methicillin-Resistant Staphylococcus aureus: A Nested Case-Control Study

Detailed contact data and the dissemination of Staphylococcus aureus in hospitals

Evaluation of a 5-day education programme in type 1 diabetes: achieving individual targets with a patient-centred approach

The GAG database: a new resource to gather genomic annotation cross-references

The R0 package: a toolbox to estimate reproduction numbers for epidemic outbreaks