Timeline

Pascal Campagne

Research Engineer

22 Oct 2025

project

Impact des hormones sexuelles sur l’immunité cutanée humaine en condition saine et dans l’hidradénite suppurée “SIAP”

07 Jul 2025

publication

Genomic analysis of Plasmodium vivax field isolates circulating in sub-Saharan Africa

30 May 2025

publication

Molecular detection of hrHPV-induced high-grade squamous intraepithelial lesions of the cervix through a targeted RNA next generation sequencing assay

16 May 2024

publication

Dynamic microfluidic single-cell screening identifies pheno-tuning compounds to potentiate tuberculosis therapy.

28 Sep 2023

publication

Increasing Prevalence of Artemisinin-Resistant HRP2-Negative Malaria in Eritrea

17 Jul 2023

course

Bioinformatics program for PhD students 2023 2024

22 Dec 2022

project

Plasmodium falciparum evolution under artemisinin pressure

11 Jul 2022

course

Bioinformatics program for PhD students 2022-2023

10 Feb 2022

software

SHADE : SHiny Application for Designing Experiments

01 Nov 2021

publication

Release of infectious virus and cytokines in nasopharyngeal swabs from individuals infected with non-alpha or alpha SARS-CoV-2 variants: an observational retrospective study.

21 Oct 2021

project

Amélioration de la prise en charge des Déficits Immunitaires Primitifs de l’enfant et de l’adulte dans les régions défavorisées du nord-ouest de la Tunisie.

09 Mar 2021

publication

Host genetic control of natural killer cell diversity revealed in the Collaborative Cross.

01 Jan 2021

publication

Altered Immune Phenotypes and HLA-DQB1 Gene Variation in Multiple Sclerosis Patients Failing Interferon β Treatment.

24 Sep 2020

course

Bioinformatics program for PhD students 2020-2021

10 Aug 2020

publication

SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis.

03 Aug 2020

publication

Emergence and clonal expansion of in vitro artemisinin-resistant Plasmodium falciparum kelch13 R561H mutant parasites in Rwanda.

04 Nov 2019

publication

Excess calorie intake early in life increases susceptibility to colitis in adulthood

17 May 2019

event

[C3BI Seminar & INCEPTION] Chris Adami- Evolution of information in HIV-1 protease

26 Apr 2019

event

A population genetic interpretation of complex trait architecture in humans

22 Feb 2019

event

[C3BI Seminar] – Nevan Krogan: Using Systems Approaches to Understand the Mechanism of Disease

04 Feb 2019

event

[C3BI Seminar]- Amine Ghozlane: The human gut resistome

29 Jan 2019

event

[C3BI Seminar]- Zamin Iqbal: Nucleotide-level analysis of genetic variation in the bacterial pan-genome

16 Jan 2019

event

[C3BI Seminar]- Yves Moreau: Bayesian matrix factorization for drug discovery and precision medicine

11 Dec 2018

event

C3BI Seminar – An evolutionary perspective on meiotic recombination in vertebrates

10 Sep 2018

event

[Seminar C3BI]-Integrated and spatial-temporal multiscale modeling of liver guide in vivo experiments in healthy & chronic disease states: a blue print for systems medicine? -by Dirk DRASDO

03 Sep 2018

event

[Seminar C3BI]-Viral phylodynamic inference: from ancient evolutionary histories to contemporary outbreaks by Philippe Lemey

10 Aug 2018

event

C3BI Seminars – Signatures of ecological processes in microbial community time series

28 Mar 2018

team

Pole STATS – biostatistics

01 Apr 2017

publication

Genetic hitchhiking and resistance evolution to transgenic Bt toxins: insights from the African stalk borer Busseola fusca (Noctuidae)

26 Aug 2016

publication

Spatial Distribution of Coffee Wilt Disease Under Roguing and Replanting Conditions: A Case Study from Kaweri Estate in Uganda

02 Jun 2016

publication

The industrial melanism mutation in British peppered moths is a transposable element

27 Feb 2016

publication

Impact of violated high-dose refuge assumptions on evolution of Bt resistance

01 Jan 2016

publication

Spatial and temporal spread of maize stem borer Busseola fusca (Fuller)(Lepidoptera: noctuidae) damage in smallholder farms

26 Jun 2015

team

Bioinformatics and Biostatistics HUB

24 Apr 2015

publication

Resistance of Busseola fusca to Cry1Ab Bt maize plants in South Africa and challenges to insect resistance management in Africa.

21 Apr 2014

publication

Phylogeography in continuous space: coupling species distribution models and circuit theory to assess the effect of contiguous migration at different climatic periods on genetic differentiation in Busseola fusca (Lepidoptera: Noctuidae)

01 Jan 2014

publication

The role of native woody species in the restoration of Campos Rupestres in quarries

23 Dec 2013

publication

Repellent, irritant and toxic effects of 20 plant extracts on adults of the malaria vector Anopheles gambiae mosquito

02 Jul 2013

publication

Dominant inheritance of field-evolved resistance to Bt corn in Busseolafusca

22 Feb 2013

publication

Cryptic introductions and the interpretation of island biodiversity

06 Nov 2012

publication

Genetic Diversity and Population Structure of Busseola segeta Bowden (Lepidoptera; Noctuidae): A Case Study of Host Use Diversification in Guineo-Congolian Rainforest Relic Area, Kenya

01 Nov 2012

publication

Comparing the van Oosterhout and Chybicki-Burczyk methods of estimating null allele frequencies for inbred populations

24 Jul 2012

publication

Genetic structure and mating system of wild cowpea populations in West Africa

29 Apr 2009

publication

Genetic signs of connectivity in Primula vulgaris (Primulaceae) in a hedgerow network landscape

01 Jan 2009

publication

Modern pollen rain–vegetation relationships along a forest–steppe transect in the Golestan National Park, NE Iran

01 Jan 2009

publication

Fine-scale response to landscape structure in Primula vulgaris Huds.: does hedgerow network connectedness ensure connectivity through gene flow?

01 Jan 2009

publication

Modeling landscape structure constraints on species dispersal with a cellular automaton: Are there convergences with empirical data?

01 Jan 2006

publication

A little guide for advanced search:

Impact des hormones sexuelles sur l’immunité cutanée humaine en condition saine et dans l’hidradénite suppurée “SIAP”

Genomic analysis of Plasmodium vivax field isolates circulating in sub-Saharan Africa

Molecular detection of hrHPV-induced high-grade squamous intraepithelial lesions of the cervix through a targeted RNA next generation sequencing assay

Dynamic microfluidic single-cell screening identifies pheno-tuning compounds to potentiate tuberculosis therapy.

Increasing Prevalence of Artemisinin-Resistant HRP2-Negative Malaria in Eritrea

Bioinformatics program for PhD students 2023 2024

Plasmodium falciparum evolution under artemisinin pressure

Bioinformatics program for PhD students 2022-2023

SHADE : SHiny Application for Designing Experiments

Release of infectious virus and cytokines in nasopharyngeal swabs from individuals infected with non-alpha or alpha SARS-CoV-2 variants: an observational retrospective study.

Amélioration de la prise en charge des Déficits Immunitaires Primitifs de l’enfant et de l’adulte dans les régions défavorisées du nord-ouest de la Tunisie.

Host genetic control of natural killer cell diversity revealed in the Collaborative Cross.

Altered Immune Phenotypes and HLA-DQB1 Gene Variation in Multiple Sclerosis Patients Failing Interferon β Treatment.

Bioinformatics program for PhD students 2020-2021

SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis.

Emergence and clonal expansion of in vitro artemisinin-resistant Plasmodium falciparum kelch13 R561H mutant parasites in Rwanda.

Excess calorie intake early in life increases susceptibility to colitis in adulthood

[C3BI Seminar & INCEPTION] Chris Adami- Evolution of information in HIV-1 protease

A population genetic interpretation of complex trait architecture in humans

[C3BI Seminar] – Nevan Krogan: Using Systems Approaches to Understand the Mechanism of Disease

[C3BI Seminar]- Amine Ghozlane: The human gut resistome

[C3BI Seminar]- Zamin Iqbal: Nucleotide-level analysis of genetic variation in the bacterial pan-genome

[C3BI Seminar]- Yves Moreau: Bayesian matrix factorization for drug discovery and precision medicine

C3BI Seminar – An evolutionary perspective on meiotic recombination in vertebrates

[Seminar C3BI]-Integrated and spatial-temporal multiscale modeling of liver guide in vivo experiments in healthy & chronic disease states: a blue print for systems medicine? -by Dirk DRASDO

[Seminar C3BI]-Viral phylodynamic inference: from ancient evolutionary histories to contemporary outbreaks by Philippe Lemey

C3BI Seminars – Signatures of ecological processes in microbial community time series

Pole STATS – biostatistics

Genetic hitchhiking and resistance evolution to transgenic Bt toxins: insights from the African stalk borer Busseola fusca (Noctuidae)

Spatial Distribution of Coffee Wilt Disease Under Roguing and Replanting Conditions: A Case Study from Kaweri Estate in Uganda

The industrial melanism mutation in British peppered moths is a transposable element

Impact of violated high-dose refuge assumptions on evolution of Bt resistance

Spatial and temporal spread of maize stem borer Busseola fusca (Fuller)(Lepidoptera: noctuidae) damage in smallholder farms

Bioinformatics and Biostatistics HUB

Resistance of Busseola fusca to Cry1Ab Bt maize plants in South Africa and challenges to insect resistance management in Africa.

Phylogeography in continuous space: coupling species distribution models and circuit theory to assess the effect of contiguous migration at different climatic periods on genetic differentiation in Busseola fusca (Lepidoptera: Noctuidae)

The role of native woody species in the restoration of Campos Rupestres in quarries

Repellent, irritant and toxic effects of 20 plant extracts on adults of the malaria vector Anopheles gambiae mosquito

Dominant inheritance of field-evolved resistance to Bt corn in Busseolafusca

Cryptic introductions and the interpretation of island biodiversity

Genetic Diversity and Population Structure of Busseola segeta Bowden (Lepidoptera; Noctuidae): A Case Study of Host Use Diversification in Guineo-Congolian Rainforest Relic Area, Kenya

Comparing the van Oosterhout and Chybicki-Burczyk methods of estimating null allele frequencies for inbred populations

Genetic structure and mating system of wild cowpea populations in West Africa

Genetic signs of connectivity in Primula vulgaris (Primulaceae) in a hedgerow network landscape

Modern pollen rain–vegetation relationships along a forest–steppe transect in the Golestan National Park, NE Iran

Fine-scale response to landscape structure in Primula vulgaris Huds.: does hedgerow network connectedness ensure connectivity through gene flow?

Modeling landscape structure constraints on species dispersal with a cellular automaton: Are there convergences with empirical data?

Factors explaining shrub species distribution in hedgerows of a mountain landscape