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2024Insights into the virome of Hyalomma marginatum in the Danube Delta: a major vector of Crimean-Congo hemorrhagic fever virus in Eastern Europe., Parasit Vectors 2024 Nov; 17(1): 482.
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2024Circovirus Hepatitis in Immunocompromised Patient, Switzerland., Emerg Infect Dis 2024 Oct; 30(10): 2140-2144.
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2023Performance of clinical metagenomics in France: a prospective observational study., Lancet Microbe 2023 Dec; (): .
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2023Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence., Viruses 2023 Sep; 15(9): .
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2023Chronic Aichi Virus Infection As a Cause of Long-Lasting Multiorgan Involvement in Patients With Primary Immune Deficiencies., Clin Infect Dis 2023 Aug; 77(4): 620-628.
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2023Virus Pop—Expanding Viral Databases by Protein Sequence Simulation, Viruses, 2023, 15 (6), pp.1227. ⟨10.3390/v15061227⟩.
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2023SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19, EMBO Reports, 2023, 24 (4), pp.e56055. ⟨10.15252/embr.202256055⟩.
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2023Circovirus Hepatitis Infection in Heart-Lung Transplant Patient, France., Emerg Infect Dis 2023 Jan; 29(2): .
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2022Fetal Zika virus infection diagnosed by metagenomic next-generation sequencing in amniotic fluid., Ultrasound Obstet Gynecol 2022 Sep; (): .
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2022Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery., Viruses 2022 Sep; 14(9): .
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2022Bat coronaviruses related to SARS-CoV-2 and infectious for human cells., Nature 2022 Apr; 604(7905): 330-336.
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2021First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1., Clin Infect Dis 2021 May; (): .
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2021The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health., Transbound Emerg Dis 2022 May; 69(3): 1387-1403.
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2021Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results, Viruses, 2021, 13 (2), pp.253. ⟨10.3390/v13020253⟩.
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2021Transcriptome Profile During Rabies Virus Infection: Identification of Human CXCL16 as a Potential New Viral Target., Front Cell Infect Microbiol 2021 ; 11(): 761074.
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2017Colorectal cancer specific conditions promote gut colonization, Proc. Natl. Acad. Sci. U.S.A. 2018 01;115(2):E283-E291.
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2014Meta-analysis of SHANK Mutations in Autism Spectrum Disorders: a gradient of severity in cognitive impairments., PLoS Genet 2014 Sep; 10(9): e1004580.
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2013Comparative analysis of resistant and susceptible macrophage gene expression response to Leishmania major parasite, BMC Genomics 2013;14:723.
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2013MicroRNA expression profile in human macrophages in response to Leishmania major infection, PLoS Negl Trop Dis 2013;7(10):e2478.
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2013Epithelial cell proliferation arrest induced by lactate and acetate from Lactobacillus casei and Bifidobacterium breve, PLoS ONE 2013;8(4):e63053.
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2012Transcriptomic signature of Leishmania infected mice macrophages: a metabolic point of view, PLoS Negl Trop Dis 2012;6(8):e1763.
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2012Genetic and functional analyses of SHANK2 mutations suggest a multiple hit model of autism spectrum disorders., PLoS Genet 2012 Feb; 8(2): e1002521.
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2011Genome-wide analysis of heteroduplex DNA in mismatch repair-deficient yeast cells reveals novel properties of meiotic recombination pathways, PLoS Genet. 2011 Sep;7(9):e1002305.
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2011A bacterial protein targets the BAHD1 chromatin complex to stimulate type III interferon response, Science 2011 Mar;331(6022):1319-21.
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2009Early over expression of messenger RNA for multiple genes, including insulin, in the Pancreatic Lymph Nodes of NOD mice is associated with Islet Autoimmunity, BMC Med Genomics 2009;2:63.
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2009Human BAHD1 promotes heterochromatic gene silencing, Proc. Natl. Acad. Sci. U.S.A. 2009 Aug;106(33):13826-31.
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2009The Listeria transcriptional landscape from saprophytism to virulence., Nature 2009 Jun; 459(7249): 950-6.
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2009Transcriptional signatures of BALB/c mouse macrophages housing multiplying Leishmania amazonensis amastigotes, BMC Genomics 2009;10:119.
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2008Interferon gamma-signature transcript profiling and IL-23 upregulation in response to Helicobacter pylori infection, Int J Immunopathol Pharmacol 2008 Jul-Sep;21(3):515-26.
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2008Virulent Shigella flexneri subverts the host innate immune response through manipulation of antimicrobial peptide gene expression, J. Exp. Med. 2008 May;205(5):1121-32.
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2008AffyGCQC: a web-based interface to detect outlying genechips with extreme studentized deviate tests, J Bioinform Comput Biol 2008 Apr;6(2):317-34.
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2008Maturation of paneth cells induces the refractory state of newborn mice to Shigella infection, J. Immunol. 2008 Apr;180(7):4924-30.
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2008The LIM-only protein FHL2 regulates cyclin D1 expression and cell proliferation, J. Biol. Chem. 2008 May;283(22):15201-8.
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2007Long oligonucleotide microarrays for African green monkey gene expression profile analysis., FASEB J 2007 Oct; 21(12): 3262-71.
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2007Histone modifications induced by a family of bacterial toxins, Proc. Natl. Acad. Sci. U.S.A. 2007 Aug;104(33):13467-72.
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2007Connexin30 deficiency causes instrastrial fluid-blood barrier disruption within the cochlear stria vascularis, Proc. Natl. Acad. Sci. U.S.A. 2007 Apr;104(15):6229-34.
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2006The protein kinase IKKepsilon can inhibit HCV expression independently of IFN and its own expression is downregulated in HCV-infected livers, Hepatology 2006 Dec;44(6):1635-47.
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2006Anti-inflammatory effect of Lactobacillus casei on Shigella-infected human intestinal epithelial cells, J. Immunol. 2006 Jan;176(2):1228-37.
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2005Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase, Cell 2005 Jun;121(5):725-37.
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2004International nomenclature for Corynebacterium diphtheriae ribotypes, Res. Microbiol. 2004 Apr;155(3):162-6.
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2003Development and use of fluorescent 16S rRNA-targeted probes for the specific detection of Methylophaga species by in situ hybridization in marine sediments, Res. Microbiol. 2003 Sep;154(7):483-90.
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2001Identification by in situ hybridization of segmented filamentous bacteria in the intestine of diarrheic rainbow trout (Oncorhynchus mykiss), Res. Microbiol. 2001 Jan-Feb;152(1):67-73.
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2000Exploring the frontier between life and death in Escherichia coli: evaluation of different viability markers in live and heat- or UV-killed cells, Res. Microbiol. 2000 Nov;151(9):755-68.
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2000Oligonucleotide probe for the visualization of Escherichia coli/Escherichia fergusonii cells by in situ hybridization: specificity and potential applications, Res. Microbiol. 2000 Sep;151(7):521-33.
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2000Streptococcus infantarius sp. nov., Streptococcus infantarius subsp. infantarius subsp. nov. and Streptococcus infantarius subsp. coli subsp. nov., isolated from humans and food, Int. J. Syst. Evol. Microbiol. 2000 Jul;50 Pt 4:1425-34.
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2000Problems associated with the direct viable count procedure applied to gram-positive bacteria, Int. J. Food Microbiol. 2000 Apr;55(1-3):281-4.
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2000Cellular activities in ultra-violet killed Escherichia coli, Int. J. Food Microbiol. 2000 Apr;55(1-3):245-7.
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1997Universal ribotyping method using a chemically labelled oligonucleotide probe mixture, Res. Microbiol. 1997 Nov;148(8):649-59.
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1997Streptococcus infantarius sp. nov. related to Streptococcus bovis and Streptococcus equinus, Adv. Exp. Med. Biol. 1997;418:393-5.
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1993Molecular typing of Chlamydia trachomatis by random amplification of polymorphic DNA, Res. Microbiol. 1993 Jun;144(5):395-404.
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1992DNA fingerprinting of Chlamydia trachomatis by use of ribosomal RNA, oligonucleotide and randomly cloned DNA probes, Res. Microbiol. 1992 Oct;143(8):755-65.
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1992Molecular typing of Brucella with cloned DNA probes, Res. Microbiol. 1992 Jan;143(1):55-65.
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1990rRNA gene restriction patterns of Leptospira: a molecular typing system, Res. Microbiol. 1990 Feb;141(2):159-71.
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