• 2025
  Diana P Baquero, Guillaume Borrel, Anastasia Gazi, Camille Martin-Gallausiaux, Virginija Cvirkaite-Krupovic, Pierre-Henri Commere, Nika Pende, Stéphane Tachon, Anna Sartori-Rupp, Thibaut Douché, Mariette Matondo, Simonetta Gribaldo, Mart Krupovic, Biogenesis of DNA-carrying extracellular vesicles by the dominant human gut methanogenic archaeon, Nature Communications, 2025, 16 (1), pp.5093. ⟨10.1038/s41467-025-60272-9⟩.
• 2024
  Dott T, Culina S, Chemali R, Mansour CA, Dubois F, Jagla B, Doisne JM, Rogge L, Huetz F, Jönsson F, Commere PH, Di Santo J, Terrier B, Quintana-Murci L, Duffy D, Hasan M, Standardized high-dimensional spectral cytometry protocol and panels for whole blood immune phenotyping in clinical and translational studies., Cytometry A 2024 Feb; 105(2): 124-138.
• 2024
  Schmutz S, Commere PH, Montcuquet N, Cumano A, Ait-Mansour C, Novault S, Hasan M, Beyond 40 fluorescent probes for deep phenotyping of blood mononuclear cells, using spectral technology., Front Immunol 2024 ; 15(): 1285215.
• 2023
  Moraes Cabé C, Novault S, Jeemin Choi A, Seffer V, Barrio Cano L, Libri V, Hasan M., High-Quality Brain and Bone Marrow Nuclei Preparation for Single Nuclei Multiome Assays, 2023 Dec 22;(202). .
• 2023
  Orta-Resendiz A, Petitdemange C, Schmutz S, Jacquelin B, Novault S, Huot N, Müller-Trutwin M., Deep phenotyping characterization of human unconventional CD8+NKG2A/C+ T cells among T and NK cells by spectral flow cytometry., STAR Protoc. 2023 Nov 29;4(4):102734.
• 2023
  Rizzo J, Trottier A, Moyrand F, Coppée JY, Maufrais C, Zimbres ACG, Dang TTV, Alanio A, Desnos-Ollivier M, Mouyna I, Péhau-Arnaude G, Commere PH, Novault S, Ene IV, Nimrichter L, Rodrigues ML, Janbon G, Coregulation of extracellular vesicle production and fluconazole susceptibility in Cryptococcus neoformans., mBio 2023 Aug; 14(4): e0087023.
• 2023
  Cuche C, Mastrogiovanni M, Juzans M, Laude H, Ungeheuer MN, Krentzel D, Gariboldi MI, Scott-Algara D, Madec M, Goyard S, Floch C, Chauveau-Le Friec G, Lafaye P, Renaudat C, Le Bidan M, Micallef C, Schmutz S, Mella S, Novault S, Hasan M, Duffy D, Di Bartolo V, Alcover A., T cell migration and effector function differences in familial adenomatous polyposis patients with APC gene mutations., Front Immunol. 2023 Jul 18;14:1163466.
• 2022
  Camilla Luiza-Batista, Sabine Thiberge, Malika Serra-Hassoun, Flore Nardella, Aurélie Claës, Vanessa C Nicolete, Pierre-Henri Commère, Liliana Mancio-Silva, Marcelo U Ferreira 3 , Artur Scherf 1 , Sylvie Garcia , Humanized mice for investigating sustained Plasmodium vivax blood-stage infections and transmission, Nat Commun. 2022 Jul 15;13(1):4123.
• 2022
  Peixoto MM, Soares-da-Silva F, Schmutz S, Mailhe MP, Novault S, Cumano A, Ait-Mansour C, , Identification of fetal liver stroma in spectral cytometry using the parameter autofluorescence., Cytometry A 2022 101 (11): 960-969.
• 2022
  Nicolas A, Deplanche M, Commere PH, Diot A, Genthon C, Marques da Silva W, Azevedo V, Germon P, Jamme H, Guédon E, Le Loir Y, Laurent F, Bierne H, Berkova N., Transcriptome Architecture of Osteoblastic Cells Infected With Staphylococcus aureus Reveals Strong Inflammatory Responses and Signatures of Metabolic and Epigenetic Dysregulation, Front Cell Infect Microbiol. 2022 Apr 7;12:854242 eCollection 2022.
• 2022
  Flora Plessier, Sandrine Schmutz, Sophie Novault, Heather Marlow, Single-Cell Transcriptomic Analysis in the Regenerating Cnidarian Nematostella vectensis, Methods Mol Biol 2022;2450:565-581.
• 2022
  Batista AS, Oliveira SDS, Pomel S, Commere PH, Mazan V, Lee M, Loiseau PM, Rossi-Bergmann B, Prina E, Duval R., Targeting chalcone binding sites in living Leishmania using a reversible fluorogenic benzochalcone probe., 2022 Mars.
• 2022
  Dominguez-Belloso A, Schmutz S, Novault S, Travier L, Deczkowska A., Isolation and Characterization of the Immune Cells from Micro-dissected Mouse Choroid Plexuses., Journal Vis Exp. .
• 2022
  Zo Andriamanantena, Fanirisoa Randrianarisaona, Maheninasy Rakotondrainipiana, Prisca Andriantsalama, Ravaka Randriamparany, Rindra Randremanana, Frédérique Randrianirina, Sophie Novault, Darragh Duffy, François Huetz, Milena Hasan, Matthieu Schoenhals, Philippe Sansonetti, Pascale Vonaesch, Inès Vigan‑womas, The Afribiota Investigators, Changes in Systemic Regulatory T Cells, Effector T Cells, and Monocyte Populations Associated With Early-Life Stunting, Frontiers in Immunology, 2022, 13, pp.864084. ⟨10.3389/fimmu.2022.864084⟩.
• 2021
  Liu J, Cvirkaite-Krupovic V, Commere PH, Yang Y, Zhou F, Forterre P, Shen Y, Krupovic M, Archaeal extracellular vesicles are produced in an ESCRT-dependent manner and promote gene transfer and nutrient cycling in extreme environments, ISME J 2021 10; 15(10): 2892-2905.
• 2021
  Juliana Rizzo, Sarah Sze Wah Wong, Anastasia D. Gazi, Frédérique Moyrand, Thibault Chaze, Pierre-Henri Commere, Sophie Novault, Mariette Matondo, Gérard Péhau-Arnaudet, Flavia C. G. Reis, Matthijn Vos, Lysangela R. Alves, Robin C. May, Leonardo Nimrichter, Marcio L. Rodrigues, Vishukumar Aimanianda, Guilhem Janbon, Cryptococcus extracellular vesicles properties and their use as vaccine platforms, Volume 10.
• 2021
  Adrien Presle, St ephane Fr emont, Audrey Salles, Pierre-Henri Commere, Nathalie Sassoon, Clarisse Berlioz-Torrent, Neetu Gupta-Rossi and Arnaud Echard, The viral restriction factor tetherin/BST2 tethers cytokinetic midbody remnants to the cell surface, Volume 31, Issue 10.
• 2020
  Morgane Grand, Mishelle Waqasi, Claudia Demarta-Gatsi, Yu Wei, Roger Peronet, Pierre-Henri Commere, Amandine Puig, Jonathan Axelrod, Reto Caldelar, Volker Heussler Rogerio Amino, Salaheddine Mecheri, Hepatic Inflammation Confers Protective Immunity Against Liver Stages of Malaria Parasite, Front Immunol.
• 2020
  Brendan Evano, Diljeet Gill, Irene Hernando-Herraez, Glenda Comai, Thomas M. Stubbs, Pierre-Henri Commere, Wolf Reik, Shahragim Tajbakhsh, Transcriptome and epigenome diversity and plasticity of muscle stem cells following transplantation, Plos Genetics.
• 2020
  Cyril Addi, Adrien Presle, Stéphane Frémont, Frédérique Cuvelier, Murielle Rocancourt, Florine Milin, Sandrine Schmutz, Julia Chamot-Rooke, Thibaut Douche, Magalie Duchateau, Quentin Giai Gianetto, Audrey Salles, Hervé Ménager, Mariette Matondo, Pascale Zimmermann, Neetu Gupta-Rossi, Arnaud Echard, The Flemmingsome reveals an ESCRT-to-membrane coupling via ALIX/syntenin/syndecan-4 required for completion of cytokinesis, Nature Communications, 2020, 11 (1), pp.1941. ⟨10.1038/s41467-020-15205-z⟩.
• 2020
  Addi C, Presle A, Frémont S, Cuvelier F, Rocancourt M, Milin F, Schmutz S, Chamot-Rooke J, Douché T, Duchateau M, Giai Gianetto Q, Salles A, Ménager H, Matondo M, Zimmermann P, Gupta-Rossi N, Echard A, The Flemmingsome reveals an ESCRT-to-membrane coupling via ALIX/syntenin/syndecan-4 required for completion of cytokinesis., Nature communications.
• 2020
  Isabelle Staropoli, Jérémy Dufloo, Anaïs Ducher, Pierre-Henri Commere, Anna Sartori-Rupp, Sophie Novault, Timothée Bruel, Valérie Lorin, Hugo Mouquet, Olivier Schwartz, Nicoletta Casartelli, Flow Cytometry Analysis of HIV-1 Env Conformations at the Surface of Infected Cells and Virions: Role of Nef, CD4, and SERINC5, American Society for Microbiology.
• 2020
  Lecoeur H, Rosazza T, Kokou K, Varet H, Coppée JY, Lari A, Commère PH, Weil R, Meng G, Milon G, Späth GF, Prina E, , Leishmania amazonensis Subverts the Transcription Factor Landscape in Dendritic Cells to Avoid Inflammasome Activation and Stall Maturation., Front Immunol 2020 ; 11(): 1098.
• 2019
  Staropoli I, Dufloo J, Ducher A, Commere PH, Sartori-Rupp A, Novault S, Bruel T, Lorin V, Mouquet H, Schwartz, Casartelli N, Flow-cytometry analysis of HIV-1 Env conformations at the surface of infected cells and virions: role of Nef, CD4 and SERINC5, J Virol.
• 2019
  Hernando-Herraez I, Evano B, Stubbs T, Commere PH, Jan Bonder M, Clark S, Andrews S, Tajbakhsh S, Reik W., Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in mouse muscle stem cells., Nat Commun.
• 2019
  Vuillier F, Li Z, Commere PH, Dynesen LT, Pellegrini S, USP18 and ISG15 coordinately impact on SKP2 and cell cycle progression., .
• 2019
  Demarta-Gatsi C, Rivkin A, Di Bartolo V, Peronet R, Ding S, Commere PH, Guillonneau F, Bellalou J, Brûlé S, Abou Karam P, Cohen SR, Lagache T, Janse CJ, Regev-Rudzki N, Mécheri S, Histamine releasing factor and elongation factor 1 alpha secreted via malaria parasites extracellular vesicles promote immune evasion by inhibiting specific T cell responses., Cell Microbiol.
• 2019
  Marton T, Feri A, Commere PH, Maufrais C, d'Enfert C, Legrand M, Identification of Recessive Lethal Alleles in the Diploid Genome of a Candida albicans Laboratory Strain Unveils a Potential Role of Repetitive Sequences in Buffering Their Deleterious Impact, mSphere..
• 2018
  Vonaesch P, Randremanana R, Gody JC, Collard JM, Giles-Vernick T, Doria M, Vigan-Womas I, Rubbo PA, Etienne A, Andriatahirintsoa EJ, Kapel N, Brown E, Huus KE, Duffy D, Finlay BB, Hasan M, Hunald FA, Robinson A, Manirakiza A, Wegener-Parfrey L, Vray M, Sansonetti PJ, Identifying the etiology and pathophysiology underlying stunting and environmental enteropathy: study protocol of the AFRIBIOTA project., BMC Pediatr 2018 Jul; 18(1): 236.
• 2017
  Schmutz S, Valente M, Cumano A, Novault S, Analysis of Cell Suspensions Isolated from Solid Tissues by Spectral Flow Cytometry, J Vis Exp 2017 May;(123).
• 2016
  Schmutz S, Valente M, Cumano A, Novault S, Spectral Cytometry Has Unique Properties Allowing Multicolor Analysis of Cell Suspensions Isolated from Solid Tissues, PLoS ONE 2016;11(8):e0159961.
• 2015
  Martinaud C, Desterke C, Konopacki J, Pieri L, Torossian F, Golub R, Schmutz S, Anginot A, Guerton B, Rochet N, Albanese P, Henault E, Pierre-Louis O, Souraud JB, de Revel T, Dupriez B, Ianotto JC, Bourgeade MF, Vannucchi AM, Lataillade JJ, Le Bousse-Kerdilès MC, Osteogenic Potential of Mesenchymal Stromal Cells Contributes to Primary Myelofibrosis, Cancer Res. 2015 Nov;75(22):4753-65.
• 2014
  Tourette C, Farina F, Vazquez-Manrique RP, Orfila AM, Voisin J, Hernandez S, Offner N, Parker JA, Menet S, Kim J, Lyu J, Choi SH, Cormier K, Edgerly CK, Bordiuk OL, Smith K, Louise A, Halford M, Stacker S, Vert JP, Ferrante RJ, Lu W, Neri C, The Wnt receptor Ryk reduces neuronal and cell survival capacity by repressing FOXO activity during the early phases of mutant huntingtin pathogenicity, PLoS Biol. 2014 Jun;12(6):e1001895.
• 2014
  Nigro G, Rossi R, Commere PH, Jay P, Sansonetti PJ, The cytosolic bacterial peptidoglycan sensor Nod2 affords stem cell protection and links microbes to gut epithelial regeneration, Cell Host Microbe 2014 Jun;15(6):792-8.
• 2014
  L'honoré A, Commère PH, Ouimette JF, Montarras D, Drouin J, Buckingham M, Redox regulation by Pitx2 and Pitx3 is critical for fetal myogenesis, Dev. Cell 2014 May;29(4):392-405.
• 2014
  Jauréguiberry S, Ndour PA, Roussel C, Ader F, Safeukui I, Nguyen M, Biligui S, Ciceron L, Mouri O, Kendjo E, Bricaire F, Vray M, Angoulvant A, Mayaux J, Haldar K, Mazier D, Danis M, Caumes E, Thellier M, Buffet P,, Postartesunate delayed hemolysis is a predictable event related to the lifesaving effect of artemisinins, Blood 2014 Jul;124(2):167-75.
• 2014
  Vuillier F, Gaud G, Guillemot D, Commere PH, Pons C, Favre M, Loss of the HPV-infection resistance EVER2 protein impairs NF-κB signaling pathways in keratinocytes, PLoS ONE 2014;9(2):e89479.
• 2014
  Dubois A, Deuve JL, Navarro P, Merzouk S, Pichard S, Commere PH, Louise A, Arnaud D, Avner P, Morey C, Spontaneous reactivation of clusters of X-linked genes is associated with the plasticity of X-inactivation in mouse trophoblast stem cells, Stem Cells 2014 Feb;32(2):377-90.
• 2013
  Gousset K, Marzo L, Commere PH, Zurzolo C, Myo10 is a key regulator of TNT formation in neuronal cells, J. Cell. Sci. 2013 Oct;126(Pt 19):4424-35.
• 2013
  Aulner N, Danckaert A, Rouault-Hardoin E, Desrivot J, Helynck O, Commere PH, Munier-Lehmann H, Späth GF, Shorte SL, Milon G, Prina E, High content analysis of primary macrophages hosting proliferating Leishmania amastigotes: application to anti-leishmanial drug discovery, PLoS Negl Trop Dis 2013;7(4):e2154.
• 2012
  Djian-Zaouche J, Campagne C, Reyes-Gomez E, Gadin-Czerw S, Bernex F, Louise A, Relaix F, Buckingham M, Panthier JJ, Aubin-Houzelstein G, Pax3( GFP ) , a new reporter for the melanocyte lineage, highlights novel aspects of PAX3 expression in the skin, Pigment Cell Melanoma Res 2012 Sep;25(5):545-54.
• 2012
  Safeukui I, Buffet PA, Deplaine G, Perrot S, Brousse V, Ndour A, Nguyen M, Mercereau-Puijalon O, David PH, Milon G, Mohandas N, Quantitative assessment of sensing and sequestration of spherocytic erythrocytes by the human spleen, Blood 2012 Jul;120(2):424-30.
• 2012
  Zimmer A, Bouley J, Le Mignon M, Pliquet E, Horiot S, Turfkruyer M, Baron-Bodo V, Horak F, Nony E, Louise A, Moussu H, Mascarell L, Moingeon P, A regulatory dendritic cell signature correlates with the clinical efficacy of allergen-specific sublingual immunotherapy, J. Allergy Clin. Immunol. 2012 Apr;129(4):1020-30.
• 2012
  Ben-Abdallah M, Sturny-Leclère A, Avé P, Louise A, Moyrand F, Weih F, Janbon G, Mémet S, Fungal-induced cell cycle impairment, chromosome instability and apoptosis via differential activation of NF-κB, PLoS Pathog. 2012;8(3):e1002555.
• 2011
  Porcherie A, Mathieu C, Peronet R, Schneider E, Claver J, Commere PH, Kiefer-Biasizzo H, Karasuyama H, Milon G, Dy M, Kinet JP, Louis J, Blank U, Mécheri S, Critical role of the neutrophil-associated high-affinity receptor for IgE in the pathogenesis of experimental cerebral malaria, J. Exp. Med. 2011 Oct;208(11):2225-36.
• 2011
  Possot C, Schmutz S, Chea S, Boucontet L, Louise A, Cumano A, Golub R, Notch signaling is necessary for adult, but not fetal, development of RORγt(+) innate lymphoid cells, Nat. Immunol. 2011 Oct;12(10):949-58.
• 2011
  Roux X, Remot A, Petit-Camurdan A, Nahori MA, Kiefer-Biasizzo H, Marchal G, Lagranderie M, Riffault S, Neonatal lung immune responses show a shift of cytokines and transcription factors toward Th2 and a deficit in conventional and plasmacytoid dendritic cells, Eur. J. Immunol. 2011 Oct;41(10):2852-61.
• 2011
  Mascarell L, Saint-Lu N, Moussu H, Zimmer A, Louise A, Lone Y, Ladant D, Leclerc C, Tourdot S, Van Overtvelt L, Moingeon P, Oral macrophage-like cells play a key role in tolerance induction following sublingual immunotherapy of asthmatic mice, Mucosal Immunol 2011 Nov;4(6):638-47.
• 2011
  Lagranderie M, Kluge C, Kiefer-Biasizzo H, Abolhassani M, Nahori MA, Fitting C, Huerre M, Bandeira A, Bercovier H, Marchal G, Mycobacterium bovis Bacillus Calmette-Guérin killed by extended freeze-drying reduces colitis in mice, Gastroenterology 2011 Aug;141(2):642-52, 652.e1-4.