Timeline

Carla Rodrigues

Deputy Director of National Reference Center

19 Sep 2024

publication

Association between pertactin-producing Bordetella pertussis and fulminant pertussis in infants: a multicenter study in France, 2008-2019.

01 Aug 2024

publication

Resurgence of Bordetella pertussis, including one macrolide-resistant isolate, France, 2024.

20 Jun 2023

publication

Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance.

15 Oct 2022

project

PER-SEVERE: Defining the contribution of variable microbial factors and host immunity to pertussis severity

11 Jul 2022

software

BIGSdb-Pasteur

28 Feb 2022

publication

Comparative phylogenomics of ESBL-, AmpC- and carbapenemase-producing Klebsiella pneumoniae originating from companion animals and humans.

23 Feb 2022

publication

High Prevalence of Klebsiella pneumoniae in European Food Products: a Multicentric Study Comparing Culture and Molecular Detection Methods.

11 Feb 2022

publication

Klebsiella MALDI TypeR: a web-based tool for Klebsiella identification based on MALDI-TOF mass spectrometry.

01 Jan 2022

publication

Genomic evolution of the globally disseminated multidrug-resistant Klebsiella pneumoniae clonal group 147.

19 Jan 2021

publication

The success of particular Acinetobacter baumannii clones: accumulating resistance and virulence inside a sugary shield.

01 Dec 2020

publication

Fourier transform infrared (FT-IR) spectroscopy typing: a real-time analysis of an outbreak by carbapenem-resistant Klebsiella pneumoniae.

27 Nov 2020

publication

Population genomics and antimicrobial resistance in Corynebacterium diphtheriae.

02 Sep 2020

publication

Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors.

01 Aug 2020

publication

Community-acquired infection caused by the uncommon hypervirulent Klebsiella pneumoniae ST66-K2 lineage.

24 Mar 2020

publication

A Front Line on Klebsiella pneumoniae Capsular Polysaccharide Knowledge: Fourier Transform Infrared Spectroscopy as an Accurate and Fast Typing Tool.

18 Mar 2020

publication

The ZKIR Assay, a Real-Time PCR Method for the Detection of Klebsiella pneumoniae and Closely Related Species in Environmental Samples.

28 Feb 2020

publication

Corynebacterium rouxii sp. nov., a novel member of the diphtheriae species complex.

05 Oct 2019

publication

Erratum to “Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.” [Res Microbiol 170 (3) (2019) 165-170].

18 Jun 2019

project

Welcome to the Nanopore User Group at Institut Pasteur webpage

01 May 2019

publication

Dynamics of clonal and plasmid backgrounds of Enterobacteriaceae producing acquired AmpC in Portuguese clinical settings over time.

01 Mar 2019

publication

Fourier transform infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing.

25 Feb 2019

publication

Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.

25 Jan 2019

project

KlebNet: a One Health network bridging science and surveillance on antimicrobial resistant Klebsiella

01 Jan 2019

publication

Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.

01 Jun 2018

publication

Virulence genes, capsular and plasmid types of multidrug-resistant CTX-M(-2, -8, -15) and KPC-2-producing Klebsiella pneumoniae isolates from four major hospitals in Brazil.

01 Apr 2018

publication

mcr-1 in Carbapenemase-Producing Klebsiella pneumoniae with Hospitalized Patients, Portugal, 2016-2017.

01 Jan 2018

publication

Identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae, Klebsiella variicola and Related Phylogroups by MALDI-TOF Mass Spectrometry.

01 Nov 2017

publication

Different Escherichia coli B2-ST131 clades (B and C) producing extended-spectrum β-lactamases (ESBL) colonizing residents of Portuguese nursing homes.

01 Sep 2017

publication

Long-Term Care Facility (LTCF) Residents Colonized With Multidrug-Resistant (MDR) Klebsiella pneumoniae Lineages Frequently Causing Infections in Portuguese Clinical Institutions.

23 Aug 2017

team

Biodiversity and Epidemiology of Bacterial Pathogens

01 Feb 2017

publication

Elucidating constraints for differentiation of major human Klebsiella pneumoniae clones using MALDI-TOF MS.

01 Aug 2016

publication

Efficient transmission of IncFIIY and IncL plasmids and Klebsiella pneumoniae ST101 clone producing OXA-48, NDM-1 or OXA-181 in Bucharest hospitals.

12 May 2016

project

Bordetella and whooping cough: Population Biology and Vaccination

01 Apr 2016

publication

An update on faecal carriage of ESBL-producing Enterobacteriaceae by Portuguese healthy humans: detection of the H30 subclone of B2-ST131 Escherichia coli producing CTX-M-27.

01 Feb 2016

publication

Importation of Fosfomycin Resistance fosA3 Gene to Europe.

01 Jan 2016

publication

KPC-3-Producing Klebsiella pneumoniae in Portugal Linked to Previously Circulating Non-CG258 Lineages and Uncommon Genetic Platforms (Tn4401d-IncFIA and Tn4401d-IncN).

01 Sep 2015

project

Population biology of the bacterial pathogen Klebsiella pneumoniae

31 Aug 2015

project

Genomic taxonomy of bacterial strains: universal nomenclatures for epidemiology and population biology

27 Jul 2015

nrc

Whooping Cough and other Bordetella infections

01 Apr 2015

publication

Snapshot on carbapenemase-producing Pseudomonas aeruginosa and Acinetobacter baumannii in Bucharest hospitals reveals unusual clones and novel genetic surroundings for blaOXA-23.

01 Jan 2015

publication

Increase of widespread A, B1 and D Escherichia coli clones producing a high diversity of CTX-M-types in a Portuguese hospital.

01 Nov 2014

publication

Expansion of ESBL-producing Klebsiella pneumoniae in hospitalized patients: a successful story of international clones (ST15, ST147, ST336) and epidemic plasmids (IncR, IncFIIK).

01 Jan 2014

publication

Detection of VIM-34, a novel VIM-1 variant identified in the intercontinental ST15 Klebsiella pneumoniae clone.

01 Oct 2013

publication

IncI1/ST3 and IncN/ST1 plasmids drive the spread of blaTEM-52 and blaCTX-M-1/-32 in diverse Escherichia coli clones from different piggeries.

01 Nov 2012

publication

Spread of an OmpK36-modified ST15 Klebsiella pneumoniae variant during an outbreak involving multiple carbapenem-resistant Enterobacteriaceae species and clones.

01 Jun 2011

publication

A little guide for advanced search:

Association between pertactin-producing Bordetella pertussis and fulminant pertussis in infants: a multicenter study in France, 2008-2019.

Resurgence of Bordetella pertussis, including one macrolide-resistant isolate, France, 2024.

Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance.

PER-SEVERE: Defining the contribution of variable microbial factors and host immunity to pertussis severity

BIGSdb-Pasteur

Comparative phylogenomics of ESBL-, AmpC- and carbapenemase-producing Klebsiella pneumoniae originating from companion animals and humans.

High Prevalence of Klebsiella pneumoniae in European Food Products: a Multicentric Study Comparing Culture and Molecular Detection Methods.

Klebsiella MALDI TypeR: a web-based tool for Klebsiella identification based on MALDI-TOF mass spectrometry.

Genomic evolution of the globally disseminated multidrug-resistant Klebsiella pneumoniae clonal group 147.

The success of particular Acinetobacter baumannii clones: accumulating resistance and virulence inside a sugary shield.

Fourier transform infrared (FT-IR) spectroscopy typing: a real-time analysis of an outbreak by carbapenem-resistant Klebsiella pneumoniae.

Population genomics and antimicrobial resistance in Corynebacterium diphtheriae.

Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors.

Community-acquired infection caused by the uncommon hypervirulent Klebsiella pneumoniae ST66-K2 lineage.

A Front Line on Klebsiella pneumoniae Capsular Polysaccharide Knowledge: Fourier Transform Infrared Spectroscopy as an Accurate and Fast Typing Tool.

The ZKIR Assay, a Real-Time PCR Method for the Detection of Klebsiella pneumoniae and Closely Related Species in Environmental Samples.

Corynebacterium rouxii sp. nov., a novel member of the diphtheriae species complex.

Erratum to “Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.” [Res Microbiol 170 (3) (2019) 165-170].

Welcome to the Nanopore User Group at Institut Pasteur webpage

Dynamics of clonal and plasmid backgrounds of Enterobacteriaceae producing acquired AmpC in Portuguese clinical settings over time.

Fourier transform infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing.

Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.

KlebNet: a One Health network bridging science and surveillance on antimicrobial resistant Klebsiella

Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.

Virulence genes, capsular and plasmid types of multidrug-resistant CTX-M(-2, -8, -15) and KPC-2-producing Klebsiella pneumoniae isolates from four major hospitals in Brazil.

mcr-1 in Carbapenemase-Producing Klebsiella pneumoniae with Hospitalized Patients, Portugal, 2016-2017.

Identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae, Klebsiella variicola and Related Phylogroups by MALDI-TOF Mass Spectrometry.

Different Escherichia coli B2-ST131 clades (B and C) producing extended-spectrum β-lactamases (ESBL) colonizing residents of Portuguese nursing homes.

Long-Term Care Facility (LTCF) Residents Colonized With Multidrug-Resistant (MDR) Klebsiella pneumoniae Lineages Frequently Causing Infections in Portuguese Clinical Institutions.

Biodiversity and Epidemiology of Bacterial Pathogens

Elucidating constraints for differentiation of major human Klebsiella pneumoniae clones using MALDI-TOF MS.

Efficient transmission of IncFIIY and IncL plasmids and Klebsiella pneumoniae ST101 clone producing OXA-48, NDM-1 or OXA-181 in Bucharest hospitals.

Bordetella and whooping cough: Population Biology and Vaccination

An update on faecal carriage of ESBL-producing Enterobacteriaceae by Portuguese healthy humans: detection of the H30 subclone of B2-ST131 Escherichia coli producing CTX-M-27.

Importation of Fosfomycin Resistance fosA3 Gene to Europe.

KPC-3-Producing Klebsiella pneumoniae in Portugal Linked to Previously Circulating Non-CG258 Lineages and Uncommon Genetic Platforms (Tn4401d-IncFIA and Tn4401d-IncN).

Population biology of the bacterial pathogen Klebsiella pneumoniae

Genomic taxonomy of bacterial strains: universal nomenclatures for epidemiology and population biology

Whooping Cough and other Bordetella infections

Snapshot on carbapenemase-producing Pseudomonas aeruginosa and Acinetobacter baumannii in Bucharest hospitals reveals unusual clones and novel genetic surroundings for blaOXA-23.

Increase of widespread A, B1 and D Escherichia coli clones producing a high diversity of CTX-M-types in a Portuguese hospital.

Expansion of ESBL-producing Klebsiella pneumoniae in hospitalized patients: a successful story of international clones (ST15, ST147, ST336) and epidemic plasmids (IncR, IncFIIK).

Detection of VIM-34, a novel VIM-1 variant identified in the intercontinental ST15 Klebsiella pneumoniae clone.

IncI1/ST3 and IncN/ST1 plasmids drive the spread of blaTEM-52 and blaCTX-M-1/-32 in diverse Escherichia coli clones from different piggeries.

Spread of an OmpK36-modified ST15 Klebsiella pneumoniae variant during an outbreak involving multiple carbapenem-resistant Enterobacteriaceae species and clones.

OXA-163, an OXA-48-related class D β-lactamase with extended activity toward expanded-spectrum cephalosporins.