Ligne de temps

Carla Rodrigues

Directeur(trice) Adjoint(e) de Centre National de Référence

01 août 2024

publication

Resurgence of Bordetella pertussis, including one macrolide-resistant isolate, France, 2024.

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20 juin 2023

publication

Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance.

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15 oct. 2022

project

PER-SEVERE : Définir la contribution des facteurs microbiens et de l’immunité de l’hôte à la gravité de la coqueluche

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11 juil. 2022

software

BIGSdb-Pasteur

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28 févr. 2022

publication

Comparative phylogenomics of ESBL-, AmpC- and carbapenemase-producing Klebsiella pneumoniae originating from companion animals and humans.

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23 févr. 2022

publication

High Prevalence of Klebsiella pneumoniae in European Food Products: a Multicentric Study Comparing Culture and Molecular Detection Methods.

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11 févr. 2022

publication

Klebsiella MALDI TypeR: a web-based tool for Klebsiella identification based on MALDI-TOF mass spectrometry.

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01 janv. 2022

publication

Genomic evolution of the globally disseminated multidrug-resistant Klebsiella pneumoniae clonal group 147.

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19 janv. 2021

publication

The success of particular Acinetobacter baumannii clones: accumulating resistance and virulence inside a sugary shield.

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01 déc. 2020

publication

Fourier transform infrared (FT-IR) spectroscopy typing: a real-time analysis of an outbreak by carbapenem-resistant Klebsiella pneumoniae.

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27 nov. 2020

publication

Population genomics and antimicrobial resistance in Corynebacterium diphtheriae.

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02 sept. 2020

publication

Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors.

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01 août 2020

publication

Community-acquired infection caused by the uncommon hypervirulent Klebsiella pneumoniae ST66-K2 lineage.

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24 mars 2020

publication

A Front Line on Klebsiella pneumoniae Capsular Polysaccharide Knowledge: Fourier Transform Infrared Spectroscopy as an Accurate and Fast Typing Tool.

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18 mars 2020

publication

The ZKIR Assay, a Real-Time PCR Method for the Detection of Klebsiella pneumoniae and Closely Related Species in Environmental Samples.

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28 févr. 2020

publication

Corynebacterium rouxii sp. nov., a novel member of the diphtheriae species complex.

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05 oct. 2019

publication

Erratum to “Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.” [Res Microbiol 170 (3) (2019) 165-170].

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18 juin 2019

project

Oxford Nanopore sequencing for detection and surveillance of pathogens

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01 mai 2019

publication

Dynamics of clonal and plasmid backgrounds of Enterobacteriaceae producing acquired AmpC in Portuguese clinical settings over time.

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01 mars 2019

publication

Fourier transform infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing.

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25 févr. 2019

publication

Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.

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25 janv. 2019

project

KlebNet: a One Health network bridging science and surveillance on antimicrobial resistant Klebsiella

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01 janv. 2019

publication

Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.

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01 juin 2018

publication

Virulence genes, capsular and plasmid types of multidrug-resistant CTX-M(-2, -8, -15) and KPC-2-producing Klebsiella pneumoniae isolates from four major hospitals in Brazil.

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01 avr. 2018

publication

mcr-1 in Carbapenemase-Producing Klebsiella pneumoniae with Hospitalized Patients, Portugal, 2016-2017.

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01 janv. 2018

publication

Identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae, Klebsiella variicola and Related Phylogroups by MALDI-TOF Mass Spectrometry.

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01 nov. 2017

publication

Different Escherichia coli B2-ST131 clades (B and C) producing extended-spectrum β-lactamases (ESBL) colonizing residents of Portuguese nursing homes.

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01 sept. 2017

publication

Long-Term Care Facility (LTCF) Residents Colonized With Multidrug-Resistant (MDR) Klebsiella pneumoniae Lineages Frequently Causing Infections in Portuguese Clinical Institutions.

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23 août 2017

team

Biodiversité et Épidémiologie des Bactéries Pathogènes

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01 févr. 2017

publication

Elucidating constraints for differentiation of major human Klebsiella pneumoniae clones using MALDI-TOF MS.

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01 août 2016

publication

Efficient transmission of IncFIIY and IncL plasmids and Klebsiella pneumoniae ST101 clone producing OXA-48, NDM-1 or OXA-181 in Bucharest hospitals.

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12 mai 2016

project

Bordetella and whooping cough: Population Biology and Vaccination

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01 avr. 2016

publication

An update on faecal carriage of ESBL-producing Enterobacteriaceae by Portuguese healthy humans: detection of the H30 subclone of B2-ST131 Escherichia coli producing CTX-M-27.

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01 févr. 2016

publication

Importation of Fosfomycin Resistance fosA3 Gene to Europe.

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01 janv. 2016

publication

KPC-3-Producing Klebsiella pneumoniae in Portugal Linked to Previously Circulating Non-CG258 Lineages and Uncommon Genetic Platforms (Tn4401d-IncFIA and Tn4401d-IncN).

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01 sept. 2015

project

Population biology of the bacterial pathogen Klebsiella pneumoniae

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31 août 2015

project

Genomic taxonomy of bacterial strains: universal nomenclatures for epidemiology and population biology

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27 juil. 2015

nrc

Coqueluche et Autres Bordetelloses

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01 avr. 2015

publication

Snapshot on carbapenemase-producing Pseudomonas aeruginosa and Acinetobacter baumannii in Bucharest hospitals reveals unusual clones and novel genetic surroundings for blaOXA-23.

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01 janv. 2015

publication

Increase of widespread A, B1 and D Escherichia coli clones producing a high diversity of CTX-M-types in a Portuguese hospital.

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01 nov. 2014

publication

Expansion of ESBL-producing Klebsiella pneumoniae in hospitalized patients: a successful story of international clones (ST15, ST147, ST336) and epidemic plasmids (IncR, IncFIIK).

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01 janv. 2014

publication

Detection of VIM-34, a novel VIM-1 variant identified in the intercontinental ST15 Klebsiella pneumoniae clone.

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01 oct. 2013

publication

IncI1/ST3 and IncN/ST1 plasmids drive the spread of blaTEM-52 and blaCTX-M-1/-32 in diverse Escherichia coli clones from different piggeries.

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01 nov. 2012

publication

Spread of an OmpK36-modified ST15 Klebsiella pneumoniae variant during an outbreak involving multiple carbapenem-resistant Enterobacteriaceae species and clones.

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01 juin 2011

publication

OXA-163, an OXA-48-related class D β-lactamase with extended activity toward expanded-spectrum cephalosporins.

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Un petit guide pour l'utilisation de la recherche avancée :

Resurgence of Bordetella pertussis, including one macrolide-resistant isolate, France, 2024.

Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance.

PER-SEVERE : Définir la contribution des facteurs microbiens et de l’immunité de l’hôte à la gravité de la coqueluche

BIGSdb-Pasteur

Comparative phylogenomics of ESBL-, AmpC- and carbapenemase-producing Klebsiella pneumoniae originating from companion animals and humans.

High Prevalence of Klebsiella pneumoniae in European Food Products: a Multicentric Study Comparing Culture and Molecular Detection Methods.

Klebsiella MALDI TypeR: a web-based tool for Klebsiella identification based on MALDI-TOF mass spectrometry.

Genomic evolution of the globally disseminated multidrug-resistant Klebsiella pneumoniae clonal group 147.

The success of particular Acinetobacter baumannii clones: accumulating resistance and virulence inside a sugary shield.

Fourier transform infrared (FT-IR) spectroscopy typing: a real-time analysis of an outbreak by carbapenem-resistant Klebsiella pneumoniae.

Population genomics and antimicrobial resistance in Corynebacterium diphtheriae.

Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors.

Community-acquired infection caused by the uncommon hypervirulent Klebsiella pneumoniae ST66-K2 lineage.

A Front Line on Klebsiella pneumoniae Capsular Polysaccharide Knowledge: Fourier Transform Infrared Spectroscopy as an Accurate and Fast Typing Tool.

The ZKIR Assay, a Real-Time PCR Method for the Detection of Klebsiella pneumoniae and Closely Related Species in Environmental Samples.

Corynebacterium rouxii sp. nov., a novel member of the diphtheriae species complex.

Erratum to “Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.” [Res Microbiol 170 (3) (2019) 165-170].

Oxford Nanopore sequencing for detection and surveillance of pathogens

Dynamics of clonal and plasmid backgrounds of Enterobacteriaceae producing acquired AmpC in Portuguese clinical settings over time.

Fourier transform infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing.

Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov.

KlebNet: a One Health network bridging science and surveillance on antimicrobial resistant Klebsiella

Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.

Virulence genes, capsular and plasmid types of multidrug-resistant CTX-M(-2, -8, -15) and KPC-2-producing Klebsiella pneumoniae isolates from four major hospitals in Brazil.

mcr-1 in Carbapenemase-Producing Klebsiella pneumoniae with Hospitalized Patients, Portugal, 2016-2017.

Identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae, Klebsiella variicola and Related Phylogroups by MALDI-TOF Mass Spectrometry.

Different Escherichia coli B2-ST131 clades (B and C) producing extended-spectrum β-lactamases (ESBL) colonizing residents of Portuguese nursing homes.

Long-Term Care Facility (LTCF) Residents Colonized With Multidrug-Resistant (MDR) Klebsiella pneumoniae Lineages Frequently Causing Infections in Portuguese Clinical Institutions.

Biodiversité et Épidémiologie des Bactéries Pathogènes

Elucidating constraints for differentiation of major human Klebsiella pneumoniae clones using MALDI-TOF MS.

Efficient transmission of IncFIIY and IncL plasmids and Klebsiella pneumoniae ST101 clone producing OXA-48, NDM-1 or OXA-181 in Bucharest hospitals.

Bordetella and whooping cough: Population Biology and Vaccination

An update on faecal carriage of ESBL-producing Enterobacteriaceae by Portuguese healthy humans: detection of the H30 subclone of B2-ST131 Escherichia coli producing CTX-M-27.

Importation of Fosfomycin Resistance fosA3 Gene to Europe.

KPC-3-Producing Klebsiella pneumoniae in Portugal Linked to Previously Circulating Non-CG258 Lineages and Uncommon Genetic Platforms (Tn4401d-IncFIA and Tn4401d-IncN).

Population biology of the bacterial pathogen Klebsiella pneumoniae

Genomic taxonomy of bacterial strains: universal nomenclatures for epidemiology and population biology

Coqueluche et Autres Bordetelloses

Snapshot on carbapenemase-producing Pseudomonas aeruginosa and Acinetobacter baumannii in Bucharest hospitals reveals unusual clones and novel genetic surroundings for blaOXA-23.

Increase of widespread A, B1 and D Escherichia coli clones producing a high diversity of CTX-M-types in a Portuguese hospital.

Expansion of ESBL-producing Klebsiella pneumoniae in hospitalized patients: a successful story of international clones (ST15, ST147, ST336) and epidemic plasmids (IncR, IncFIIK).

Detection of VIM-34, a novel VIM-1 variant identified in the intercontinental ST15 Klebsiella pneumoniae clone.

IncI1/ST3 and IncN/ST1 plasmids drive the spread of blaTEM-52 and blaCTX-M-1/-32 in diverse Escherichia coli clones from different piggeries.

Spread of an OmpK36-modified ST15 Klebsiella pneumoniae variant during an outbreak involving multiple carbapenem-resistant Enterobacteriaceae species and clones.

OXA-163, an OXA-48-related class D β-lactamase with extended activity toward expanded-spectrum cephalosporins.