Ligne de temps

Thomas Cokelaer
Ingénieur(e) de Recherche
19 Aug 2019
publication

Compatibility of 5-ethynyl-2’F-ANA UTP with in vitro selection for the generation of base-modified, nuclease resistant aptamers

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02 Aug 2019
team

Biomics – Dry-Lab

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24 Jun 2019
event

Core4Life Paris 2019 (joint Curie-Pasteur)

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24 Oct 2018
publication

A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection.

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27 Sep 2018
tool

Bioconda

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06 Sep 2018
publication

Sequana Coverage: Detection and Characterization of Genomic Variations using Running Median and Mixture Models

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20 Aug 2018
publication

High Acquisition Rate of ESBL-Producing Enterobacteriaceae among French Military Personnel on Mission Abroad, without Evidence of Inter-Individual Transmission.

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19 Jul 2018
course

Scientific Programming in Python

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19 Jul 2018
project

Bioconvert

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02 Jul 2018
publication

Bioconda: sustainable and comprehensive software distribution for the life sciences

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26 Jun 2018
software

Sequanix: a dynamic graphical interface for Snakemake workflows

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19 Jan 2018
publication

Sequanix: A Dynamic Graphical Interface for Snakemake Workflows

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24 Nov 2017
publication

GDSCTools for Mining Pharmacogenomic Interactions in Cancer.

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27 Oct 2017
software

Spectral Analysis in Python

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31 Mar 2017
publication

Drug resistance mechanisms in colorectal cancer dissected with cell type-specific dynamic logic models

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22 Nov 2016
software

Sequana: a set of flexible NGS pipelines

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12 Aug 2016
publication

Efficient randomization of biological networks while preserving functional characterization of individual nodes

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06 Jul 2016
publication

A Landscape of Pharmacogenomic Interactions in Cancer

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24 Jun 2016
software

BioServices: a common Python package to access biological Web Services programmatically

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23 Jun 2016
software

DREAMTools

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23 Jun 2016
software

GDSCTools: drug discovery

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22 Feb 2016
publication

Inferring causal molecular networks: empirical assessment through a community-based effort

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09 Oct 2015
publication

DREAMTools: a Python package for scoring collaborative challenges

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18 Mar 2015
team

Biomics

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25 Jan 2015
publication

Cooperative development of logical modelling standards and tools with CoLoMoTo

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09 Dec 2014
publication

Phosphoproteomic analyses reveal novel cross-modulation mechanisms between two signaling pathways in yeast

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01 Jun 2014
publication

A community effort to assess and improve drug sensitivity prediction algorithms

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10 May 2014
publication

MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics

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07 Feb 2014
publication

Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach

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10 Dec 2013
publication

SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools

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23 Sep 2013
publication

BioServices: a common Python package to access biological Web Services programmatically

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12 Jul 2013
publication

Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming

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27 Jan 2013
publication

Evaluation of methods for modeling transcription factor sequence specificity

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18 Oct 2012
publication

CellNOptR: a flexible toolkit to train protein signaling networks to data using multiple logic formalisms

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30 May 2012
publication

L-py: an L-system simulation framework for modeling plant architecture development based on a dynamic language

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20 Aug 2009
publication

An upper limit on the stochastic gravitational-wave background of cosmological origin

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20 Mar 2009
publication

All-sky LIGO search for periodic gravitational waves in the early fifth-science-run data

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21 Nov 2008
publication

Search for gravitational-wave bursts from soft gamma repeaters

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22 Nov 2005
publication

Upper limits on a stochastic background of gravitational waves

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12 May 2005
publication

Limits on gravitational-wave emission from selected pulsars using LIGO data

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