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Responsable de Structure
Computational biologist/biostatistician for Systems Medicine
A computational biologist/biostatistician position is open at Institut Pasteur, an internationally renowned research institute in the center of Paris, France. The successful candidate will work in the Systems Biology lab (see also http://systemsbiology.fr), which […]
PTR 392 – Systems-wide analysis of Leishmania virulence
(EN) Fatma Z. Guerfali (PI)
This PTR aims to gain novel insight into the nature, the expression, and the regulation of Leishmania virulence factors through the investigation of genetics, transcriptomics, and proteomics differences between (i) virulent and avirulent L. […]
Thomas Bourgeron (PI)
GRAVITY allows for rapid visualization and analysis of all the exonic variants stored in a database or in a VCF file by mapping them on an interaction network. It is designed as a plugin […]
Cytoscape: Visualization and analysis of omics data in interaction networks
Benno Schwikowski (PI)
Cytoscape is the worldwide standard open-source platform for network visualization and data integration. This project, which we started at the Institute for Systems Biology in Seattle, provides a universal, customizable tool for the network-based […]
2015Bacterial Internalization, Localization, and Effectors Shape the Epithelial Immune Response during Shigella flexneri Infection, Infect. Immun. 2015 Sep;83(9):3624-37.
2015Protein domain-level landscape of cancer-type-specific somatic mutations, PLoS Comput. Biol. 2015 Mar;11(3):e1004147.
2015Filter-free exhaustive odds ratio-based genome-wide interaction approach pinpoints evidence for interaction in the HLA region in psoriasis, BMC Genet. 2015;16:11.
2015Automated flow cytometric analysis across large numbers of samples and cell types, Clin. Immunol. 2015 Apr;157(2):249-60.
2014The Cyni framework for network inference in Cytoscape, Bioinformatics 2015 May;31(9):1499-501.
2014A proteome-scale map of the human interactome network, Cell 2014 Nov;159(5):1212-26.
2014A chaperome subnetwork safeguards proteostasis in aging and neurodegenerative disease, Cell Rep 2014 Nov;9(3):1135-50.
2014Systematic screening reveals a role for BRCA1 in the response to transcription-associated DNA damage, Genes Dev. 2014 Sep;28(17):1957-75.
2014The Cytoscape app article collection, F1000Res 2014;3:138.
2013Analysis of time-resolved gene expression measurements across individuals, PLoS ONE 2013;8(12):e82340.
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