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© Research
Tool

Secreton – Non-Flagellar Type III Secretion Systems in sequenced genomes

Scientific Fields
Diseases
Organisms
Applications
Technique
Starting Date
05
Sep 2015
Status
Ongoing
Members
2
Structures
1
Publications
1

About

Non-Flagellar Type III Secretion Systems (NF-T3SS, or injectisomes) are bacterial machineries partially homologous to the bacterial flagellum, which allow direct injection of bacterial effectors from bacterial cytoplasm to eukaryotic cells via a molecular needle (cf. schema above). NF-T3SS are found in animal and plant pathogens, but also in plant and insect symbionts. This website allows to query a dataset of 216 NF-T3SS retrieved from 1385 complete genome sequences. These systems were detected with proteic profiles of NF-T3SS core genes (sctC, sctN, sctJ, sctQ, sctR, sctS, sctT, sctU, sctV), and with an analysis of the genomic context of the hits obtained.
Authors: Sophie Abby, Bertrand Néron, Eduardo Rocha.
Availability: http://secreton.web.pasteur.fr/secreton/_design/secreton/index.html
Snapshot:

SecretonDB

Fundings