Timeline

Thibault Lagache

Group Leader

04 Nov 2024

project

DECODE: Chasing functional ensembles in calcium imaging of Hydra’s neuronal activity to decode its behaviours’ repertoire

27 May 2024

publication

A machine learning approach to distinguish different subdiffusive dynamics in particle tracking

27 May 2024

publication

PARTICLE TRACKING IN BIOLOGICAL IMAGES WITH OPTICAL-FLOW ENHANCED KALMAN FILTERING

01 Mar 2024

publication

Automatic monitoring of neural activity with single-cell resolution in behaving Hydra

19 Feb 2024

team

Statistical analysis and modeling of cellular processes

30 Jan 2024

news

Habilitation à diriger des recherches, Université Paris Cité

23 Sep 2023

publication

Automatic

01 Sep 2023

publication

Tracking Intermittent Particles with Self-Learned Visual Features

22 Jul 2022

publication

Tracking receptor motions at the plasma membrane reveals distinct effects of ligands on CCR5 dynamics depending on its dimerization status.

26 Apr 2022

publication

Spatial Analysis For Histopathology: A Statistical Approach

26 Apr 2022

publication

Statistical Coupling Between time Point-Processes

08 Oct 2021

publication

Tracking calcium dynamics from individual neurons in behaving animals.

27 Sep 2021

publication

HIV-1 hijacks the cell extracellular matrix to spread collectively and efficiently between T lymphocytes

14 Sep 2021

publication

Cytokine receptor cluster size impacts its endocytosis and signaling.

23 Aug 2021

event

BioImage Informatics 2021 virtual conference

25 May 2021

publication

A Robust and Versatile Framework to Compare Spike Detection Methods in Calcium Imaging of Neuronal Activity

13 Jan 2021

course

Webinar sur les méthodes de colocalisation avancées (SODA) pour la NEUBIAS Academy

13 Jan 2021

event

Hackatrack : journée d’atelier sur le suivi cellulaire en imagerie

16 Nov 2020

publication

Evaluating the Stability of Spatial Keypoints via Cluster Core Correspondence Index

13 Nov 2020

publication

Evaluating the Stability of Spatial Keypoints via Cluster Core Correspondence Index.

12 Nov 2020

project

Statistical analysis of functional connectivity and coding by neuronal ensembles

12 Nov 2020

project

Statistical analysis of spatial coupling in bioimaging with SODA

14 Aug 2020

publication

Robust single neuron tracking of calcium imaging in behaving Hydra

22 Jul 2020

publication

Generalizing the Statistical Analysis of Objects’ Spatial Coupling in Bioimaging

13 Aug 2019

publication

Electrodiffusion models of synaptic potentials in dendritic spines.

01 Jul 2019

publication

Histamine releasing factor and elongation factor 1 alpha secreted via malaria parasites extracellular vesicles promote immune evasion by inhibiting specific T cell responses.

20 May 2019

publication

Real-time analysis of the behaviour of groups of mice via a depth-sensing camera and machine learning.

01 Jan 2019

publication

Electrodiffusion models of synaptic potentials in dendritic spines

15 Feb 2018

publication

Mapping molecular assemblies with fluorescence microscopy and object-based spatial statistics.

06 Feb 2018

publication

Quantitative and Statistical Study of the Dynamics of Clathrin-Dependent and -Independent Endocytosis Reveal a Differential Role of EndophilinA2.

13 Sep 2017

publication

Legionella pneumophila Modulates Mitochondrial Dynamics to Trigger Metabolic Repurposing of Infected Macrophages.

23 Jun 2017

publication

Stochastic Model of Acidification, Activation of Hemagglutinin and Escape of Influenza Viruses from an Endosome

01 Jan 2017

publication

Extended Narrow Escape with Many Windows for Analyzing Viral Entry into the Cell Nucleus

23 May 2016

publication

A role for septin 2 in Drp1-mediated mitochondrial fission.

20 Nov 2015

project

Endocytosis: the clathrin-independent uptake of cytokine receptors

13 Aug 2015

publication

Membrane protrusion powers clathrin-independent endocytosis of interleukin-2 receptor.

31 May 2015

publication

Statistical analysis of molecule colocalization in bioimaging.

10 Mar 2015

publication

KDEL Receptors Assist Dengue Virus Exit from the Endoplasmic Reticulum.

01 Jan 2015

publication

Imaging intraflagellar transport in trypanosomes.

02 Dec 2014

team

Biological Image Analysis

27 Jun 2014

publication

Membrane trafficking. Nucleoside diphosphate kinases fuel dynamin superfamily proteins with GTP for membrane remodeling.

01 Jun 2014

publication

Early sequence of events triggered by the interaction of Neisseria meningitidis with endothelial cells.

01 Jan 2013

publication

Analysis of the spatial organization of molecules with robust statistics.

19 Sep 2012

publication

Intraflagellar transport proteins cycle between the flagellum and its base

13 Sep 2012

publication

Shigella effector IpaB-induced cholesterol relocation disrupts the Golgi complex and recycling network to inhibit host cell secretion

28 Jun 2012

publication

Icy: an open bioimage informatics platform for extended reproducible research

06 Mar 2012

publication

Modeling the step of endosomal escape during cell infection by a nonenveloped virus

28 Jan 2009

publication

Quantitative analysis of virus and plasmid trafficking in cells

24 Mar 2008

publication

A little guide for advanced search:

DECODE: Chasing functional ensembles in calcium imaging of Hydra’s neuronal activity to decode its behaviours’ repertoire

A machine learning approach to distinguish different subdiffusive dynamics in particle tracking

PARTICLE TRACKING IN BIOLOGICAL IMAGES WITH OPTICAL-FLOW ENHANCED KALMAN FILTERING

Automatic monitoring of neural activity with single-cell resolution in behaving Hydra

Statistical analysis and modeling of cellular processes

Habilitation à diriger des recherches, Université Paris Cité

Automatic

Tracking Intermittent Particles with Self-Learned Visual Features

Tracking receptor motions at the plasma membrane reveals distinct effects of ligands on CCR5 dynamics depending on its dimerization status.

Spatial Analysis For Histopathology: A Statistical Approach

Statistical Coupling Between time Point-Processes

Tracking calcium dynamics from individual neurons in behaving animals.

HIV-1 hijacks the cell extracellular matrix to spread collectively and efficiently between T lymphocytes

Cytokine receptor cluster size impacts its endocytosis and signaling.

BioImage Informatics 2021 virtual conference

A Robust and Versatile Framework to Compare Spike Detection Methods in Calcium Imaging of Neuronal Activity

Webinar sur les méthodes de colocalisation avancées (SODA) pour la NEUBIAS Academy

Hackatrack : journée d’atelier sur le suivi cellulaire en imagerie

Evaluating the Stability of Spatial Keypoints via Cluster Core Correspondence Index

Evaluating the Stability of Spatial Keypoints via Cluster Core Correspondence Index.

Statistical analysis of functional connectivity and coding by neuronal ensembles

Statistical analysis of spatial coupling in bioimaging with SODA

Robust single neuron tracking of calcium imaging in behaving Hydra

Generalizing the Statistical Analysis of Objects’ Spatial Coupling in Bioimaging

Electrodiffusion models of synaptic potentials in dendritic spines.

Histamine releasing factor and elongation factor 1 alpha secreted via malaria parasites extracellular vesicles promote immune evasion by inhibiting specific T cell responses.

Real-time analysis of the behaviour of groups of mice via a depth-sensing camera and machine learning.

Electrodiffusion models of synaptic potentials in dendritic spines

Mapping molecular assemblies with fluorescence microscopy and object-based spatial statistics.

Quantitative and Statistical Study of the Dynamics of Clathrin-Dependent and -Independent Endocytosis Reveal a Differential Role of EndophilinA2.

Legionella pneumophila Modulates Mitochondrial Dynamics to Trigger Metabolic Repurposing of Infected Macrophages.

Stochastic Model of Acidification, Activation of Hemagglutinin and Escape of Influenza Viruses from an Endosome

Extended Narrow Escape with Many Windows for Analyzing Viral Entry into the Cell Nucleus

A role for septin 2 in Drp1-mediated mitochondrial fission.

Endocytosis: the clathrin-independent uptake of cytokine receptors

Membrane protrusion powers clathrin-independent endocytosis of interleukin-2 receptor.

Statistical analysis of molecule colocalization in bioimaging.

KDEL Receptors Assist Dengue Virus Exit from the Endoplasmic Reticulum.

Imaging intraflagellar transport in trypanosomes.

Biological Image Analysis

Membrane trafficking. Nucleoside diphosphate kinases fuel dynamin superfamily proteins with GTP for membrane remodeling.

Early sequence of events triggered by the interaction of Neisseria meningitidis with endothelial cells.

Analysis of the spatial organization of molecules with robust statistics.

Intraflagellar transport proteins cycle between the flagellum and its base

Shigella effector IpaB-induced cholesterol relocation disrupts the Golgi complex and recycling network to inhibit host cell secretion

Icy: an open bioimage informatics platform for extended reproducible research

Modeling the step of endosomal escape during cell infection by a nonenveloped virus

Quantitative analysis of virus and plasmid trafficking in cells

Quantifying intermittent transport in cell cytoplasm