Timeline

Jean-Marc Collard
Permanent Researcher
09 Oct 2024
publication

Intestinal newborn regulatory B cell antibodies modulate microbiota communities.

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19 Dec 2023
publication

NDP52 mediates an antiviral response to hepatitis B virus infection through Rab9-dependent lysosomal degradation pathway.

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09 Oct 2023
project

AFRIBIOTA 2

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05 Oct 2023
publication

Incidence and risk factors of neonatal bacterial infections: a community-based cohort from Madagascar (2018-2021).

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27 Sep 2023
project

Tableaux épidémio-clinico-biologiques des infections à Salmonella enterica sérotype Paratyphi C et 6,7:c:- et 6,7 :- :- du même groupe clonal en France – TAPAS

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04 Aug 2023
publication

Metagenomics revealed a correlation of gut phageome with autism spectrum disorder.

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02 Aug 2023
publication

One Health compartment analysis of ESBL-producing Escherichia coli reveals multiple transmission events in a rural area of Madagascar.

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02 Aug 2023
publication

Factors Associated with Carriage of Enteropathogenic and Non-Enteropathogenic Viruses: A Reanalysis of Matched Case-Control Data from the AFRIBIOTA Site in Antananarivo, Madagascar.

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01 Jun 2023
publication

Inappropriate antibiotic prescribing and its determinants among outpatient children in 3 low- and middle-income countries: A multicentric community-based cohort study.

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14 Apr 2023
publication

Stillbirths and neonatal mortality in LMICs: A community-based mother-infant cohort study.

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01 Apr 2023
publication

Vaccination Coverage and Risk Factors Associated With Incomplete Vaccination Among Children in Cambodia, Madagascar, and Senegal.

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12 Jan 2023
publication

Author Correction: Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance.

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01 Jan 2023
publication

The eukaryome of African children is influenced by geographic location, gut biogeography, and nutritional status.

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01 Jan 2023
publication

Efficacy and safety of combination targeted therapies in immune-mediated inflammatory disease: the COMBIO study.

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01 Dec 2022
publication

Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance.

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11 Oct 2022
publication

Stunted children display ectopic small intestinal colonization by oral bacteria, which cause lipid malabsorption in experimental models.

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30 Sep 2022
publication

Prevalence and factors associated with faecal carriage of extended-spectrum β-lactamase-producing Enterobacterales among peripartum women in the community in Cambodia.

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23 Sep 2022
publication

Neonatal acquisition of extended-spectrum beta-lactamase-producing Enterobacteriaceae in the community of a low-income country (NeoLIC): protocol for a household cohort study in Moramanga, Madagascar.

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12 Aug 2022
publication

Putative Biomarkers of Environmental Enteric Disease Fail to Correlate in a Cross-Sectional Study in Two Study Sites in Sub-Saharan Africa.

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09 Jul 2022
publication

Factors associated with anaemia among preschool- age children in underprivileged neighbourhoods in Antananarivo, Madagascar.

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01 May 2022
publication

High prevalence of small intestine bacteria overgrowth and asymptomatic carriage of enteric pathogens in stunted children in Antananarivo, Madagascar.

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27 Apr 2022
publication

Characterization of Klebsiella pneumoniae isolated from patients suspected of pulmonary or bubonic plague during the Madagascar epidemic in 2017.

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25 Mar 2022
publication

Excess risk of subsequent infection in hospitalized children from a community cohort study in Cambodia and Madagascar.

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01 Mar 2022
publication

Clinical and experimental bacteriophage studies: Recommendations for possible approaches for standing against SARS-CoV-2.

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13 Jan 2022
publication

Leveraging serology to titrate immunisation programme functionality for diphtheria in Madagascar.

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01 Jan 2022
publication

Changes in Systemic Regulatory T Cells, Effector T Cells, and Monocyte Populations Associated With Early-Life Stunting

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01 Sep 2021
publication

Severe bacterial neonatal infections in Madagascar, Senegal, and Cambodia: A multicentric community-based cohort study.

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12 Aug 2021
publication

Factors Associated with Stunted Growth in Children Under Five Years in Antananarivo, Madagascar and Bangui, Central African Republic.

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01 May 2021
publication

Taurine Makes Our Microbiota Stronger.

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01 Apr 2021
publication

High prevalence of intestinal parasite infestations among stunted and control children aged 2 to 5 years old in two neighborhoods of Antananarivo, Madagascar

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16 Nov 2020
publication

Seroprevalence of pertussis in Madagascar and implications for vaccination.

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08 Oct 2020
publication

Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism.

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02 Sep 2020
publication

Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors.

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27 Jul 2020
publication

Immunoglobulin recognition of fecal bacteria in stunted and non-stunted children: findings from the Afribiota study.

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01 Jul 2020
publication

Characterization of Klebsiella pneumoniae isolates from a mother-child cohort in Madagascar.

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01 Mar 2020
publication

Genome-based insights into the resistomes and mobilomes of two Providencia rettgeri strains isolated from wound infections in Madagascar.

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29 Aug 2019
publication

Draft Genome Sequence of a Chryseobacterium indologenes Strain Isolated from a Blood Culture of a Hospitalized Child in Antananarivo, Madagascar.

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01 Jun 2019
publication

Transmission Routes of Extended-Spectrum Beta-Lactamase-Producing Enterobacteriaceae in a Neonatology Ward in Madagascar.

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01 Apr 2019
publication

Risk factors for acquisition of meningococcal carriage in the African meningitis belt.

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01 Mar 2019
publication

Triplex real-time PCR assay for the detection of Streptococcus pneumoniae, Neisseria meningitidis and Haemophilus influenzae directly from clinical specimens without extraction of DNA.

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01 Feb 2019
publication

CTX-M-55-type ESBL-producing Salmonella enterica are emerging among retail meats in Phnom Penh, Cambodia.

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25 Jan 2019
publication

Meat and Fish as Sources of Extended-Spectrum β-Lactamase-Producing Escherichia coli, Cambodia.

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01 Jan 2019
publication

Phenotypic and molecular characterisations of carbapenem-resistant Acinetobacter baumannii strains isolated in Madagascar.

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04 Sep 2018
publication

Stunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa.

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19 Jul 2018
publication

Identifying the etiology and pathophysiology underlying stunting and environmental enteropathy: study protocol of the AFRIBIOTA project.

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07 Mar 2018
publication

Melioidosis in the Western Indian Ocean and the Importance of Improving Diagnosis, Surveillance, and Molecular Typing.

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05 Mar 2018
publication

Combating Global Antibiotic Resistance: Emerging One Health Concerns in Lower- and Middle-Income Countries.

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01 Mar 2018
publication

Acquisition of extended spectrum beta-lactamase-producing enterobacteriaceae in neonates: A community based cohort in Madagascar.

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01 Jan 2018
publication

Development of a PCR algorithm to detect and characterize Neisseria meningitidis carriage isolates in the African meningitis belt.

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01 Sep 2017
publication

Usefulness and accuracy of MALDI-TOF mass spectrometry as a supplementary tool to identify mosquito vector species and to invest in development of international database.

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01 Jun 2017
publication

Health crises due to infectious and communicable diseases : European preparedness and response tools in an international context.

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01 Mar 2017
publication

Airborne dust and high temperatures are risk factors for invasive bacterial disease.

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07 Feb 2017
publication

The global distribution and diversity of protein vaccine candidate antigens in the highly virulent Streptococcus pnuemoniae serotype 1.

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01 Jan 2017
publication

Investigation of correlates of protection against pharyngeal carriage of Neisseria meningitidis genogroups W and Y in the African meningitis belt.

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01 Jan 2017
publication

Review of Antibiotic Resistance in the Indian Ocean Commission: A Human and Animal Health Issue.

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01 Dec 2016
publication

Household transmission of Neisseria meningitidis in the African meningitis belt: a longitudinal cohort study.

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08 Nov 2016
publication

Understanding pneumococcal serotype 1 biology through population genomic analysis.

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08 Nov 2016
publication

A community survey of antibiotic consumption among children in Madagascar and Senegal: the importance of healthcare access and care quality.

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01 Jun 2016
publication

Pharyngeal carriage of Neisseria species in the African meningitis belt.

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01 Jan 2016
publication

A Seroepidemiological Study of Serogroup A Meningococcal Infection in the African Meningitis Belt.

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01 Jan 2016
publication

Development of Real-Time PCR Methods for the Detection of Bacterial Meningitis Pathogens without DNA Extraction.

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01 Jan 2016
publication

Correction: A Seroepidemiological Study of Serogroup A Meningococcal Infection in the African Meningitis Belt.

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15 Nov 2015
publication

Public Health Impact After the Introduction of PsA-TT: The First 4 Years.

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15 Oct 2015
publication

The Diversity of Meningococcal Carriage Across the African Meningitis Belt and the Impact of Vaccination With a Group A Meningococcal Conjugate Vaccine.

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01 Aug 2015
publication

Region-specific diversification of the highly virulent serotype 1 Streptococcus pneumoniae.

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01 Jul 2015
publication

MLVA-typing on Streptococcus pneumoniae serotype 1 isolated from meningitis cases in Niger before the introduction of PCV-13 revealed a low genetic diversity.

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11 May 2015
team

Enteric Bacterial Pathogens

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01 Apr 2015
publication

Multidrug-resistant Salmonella enterica serotype Typhi, Gulf of Guinea Region, Africa.

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01 Jan 2015
publication

Changes in Meningococcal Strains in the Era of a Serogroup C Vaccination Campaign: Trends and Evolution in Belgium during the Period 1997-2012.

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01 Jun 2014
publication

Prevalence of Bordetella infection in a hospital setting in niamey, niger.

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01 May 2014
publication

Spatio-temporal factors associated with meningococcal meningitis annual incidence at the health centre level in Niger, 2004-2010.

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01 Apr 2014
publication

Rotavirus surveillance in urban and rural areas of Niger, April 2010-March 2012.

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01 Jan 2014
publication

A five-year field assessment of rapid diagnostic tests for meningococcal meningitis in Niger by using the combination of conventional and real-time PCR assays as a gold standard.

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06 Dec 2013
publication

Epidemiological changes in meningococcal meningitis in Niger from 2008 to 2011 and the impact of vaccination.

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01 Aug 2013
publication

Meningococcal carriage in the African meningitis belt.

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01 Jul 2013
publication

Laboratory evaluation of a rapid diagnostic test for Neisseria meningitidis serogroup A.

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21 May 2013
publication

Significant sequelae after bacterial meningitis in Niger: a cohort study.

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01 Mar 2013
publication

Priorities for research on meningococcal disease and the impact of serogroup A vaccination in the African meningitis belt.

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01 Jan 2013
publication

Methods for identifying Neisseria meningitidis carriers: a multi-center study in the African meningitis belt.

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01 Jan 2013
publication

Determination of pneumococcal serotypes in meningitis cases in Niger, 2003-2011.

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15 Dec 2012
publication

Spatiotemporal circulation of influenza viruses in 5 African countries during 2008-2009: a collaborative study of the Institut Pasteur International Network.

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01 Apr 2012
publication

Transmission of multiple resistant Salmonella Concord from internationally adopted children to their adoptive families and social environment: proposition of guidelines.

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01 Mar 2012
publication

Influenza transmission during a one-year period (2009-2010) in a Sahelian city: low temperature plays a major role.

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01 Jan 2012
publication

Analysing spatio-temporal clustering of meningococcal meningitis outbreaks in Niger reveals opportunities for improved disease control.

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01 Nov 2011
publication

Microbiological and epidemiological investigation of the Neisseria meningitidis serogroup A epidemic in Niger in 2009: last wave before the introduction of the serogroup A meningococcal conjugate vaccine?

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01 Jul 2011
publication

Detection of a geographical and endemic cluster of hyper-invasive meningococcal strains.

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01 Sep 2010
publication

Increase in Neisseria meningitidis serogroup W135, Niger, 2010.

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01 Jun 2010
publication

Microbiologic and clinical features of Salmonella species isolated from bacteremic children in eastern Democratic Republic of Congo.

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01 Mar 2010
publication

Lessons learned from the management of a national outbreak of Salmonella ohio linked to pork meat processing and distribution.

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11 Feb 2010
publication

Microbiological and molecular investigation of an increase of human listeriosis in Belgium, 2006-2007.

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01 May 2009
publication

Surveillance of antibiotic susceptibility patterns among Shigella sonnei strains isolated in Belgium during the 18-year period 1990 to 2007.

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01 Aug 2008
publication

Novel insertion sequence- and transposon-mediated genetic rearrangements in genomic island SGI1 of Salmonella enterica serovar Kentucky.

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01 Jun 2008
publication

Drastic decrease of Salmonella Enteritidis isolated from humans in Belgium in 2005, shift in phage types and influence on foodborne outbreaks.

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01 Mar 2008
publication

Antimicrobial drug resistance in human nontyphoidal Salmonella isolates in Europe 2000-2004: a report from the Enter-net International Surveillance Network.

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01 Nov 2007
publication

A bacterial population study of commercialized wastewater inoculants.

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21 Apr 2007
publication

Travel-acquired salmonellosis due to Salmonella Kentucky resistant to ciprofloxacin, ceftriaxone and co-trimoxazole and associated with treatment failure.

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26 Feb 2007
publication

Dissemination of an extended-spectrum-beta-lactamase blaTEM-52 gene-carrying IncI1 plasmid in various Salmonella enterica serovars isolated from poultry and humans in Belgium and France between 2001 and 2005.

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19 Jan 2007
publication

Using European travellers as an early alert to detect emerging pathogens in countries with limited laboratory resources.

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01 Jan 2007
publication

[Pet turtle and septicemia: what is the relationship?].

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01 Aug 2006
publication

Isolation of Salmonella from environmental samples collected in the reptile department of Antwerp Zoo using different selective methods.

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01 Aug 2006
publication

Clonal emergence of extended-spectrum beta-lactamase (CTX-M-2)-producing Salmonella enterica serovar Virchow isolates with reduced susceptibilities to ciprofloxacin among poultry and humans in Belgium and France (2000 to 2003).

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01 Dec 2005
publication

Detection and characterization of tet(M) in tetracycline-resistant Listeria strains from human and food-processing origins in Belgium and France.

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01 Nov 2005
publication

Belgian surveillance plans to assess changes in Salmonella prevalence in meat at different production stages.

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31 Oct 2005
publication

Characterization of Salmonella isolates from captive lizards.

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01 Jun 2005
publication

International Salmonella Typhimurium DT104 infections, 1992-2001.

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01 Feb 2005
publication

The Enter-net and Salm-gene databases of foodborne bacterial pathogens that cause human infections in Europe and beyond: an international collaboration in surveillance and the development of intervention strategies.

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01 Dec 2004
publication

Cats as a risk for transmission of antimicrobial drug-resistant Salmonella.

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01 Nov 2004
publication

International trends in salmonella serotypes 1998-2003–a surveillance report from the Enter-net international surveillance network.

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01 Nov 2004
publication

Dramatic shift in the epidemiology of Salmonella enterica serotype Enteritidis phage types in western Europe, 1998-2003–results from the Enter-net international salmonella database.

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01 May 2004
publication

Assessment of virulence of pigeon isolates of Salmonella enterica subsp. enterica serovar typhimurium variant copenhagen for humans.

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01 Apr 2004
publication

Salmonella agona harboring genomic island 1-A.

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01 Mar 2004
publication

Prevalence and molecular characterization of tetracycline resistance in Enterococcus isolates from food.

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01 Jan 2004
publication

Phylogeny of efflux-mediated tetracycline resistance genes and related proteins revisited.

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01 Jan 2004
publication

Salmonella enterica subspecies houtenae serotype 44:z4, z23:–as a rare cause of meningitis.

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01 Jan 2004
publication

Antimicrobial drug resistance in nontyphoid human Salmonella in Belgium: trends for the period 2000-2002.

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01 Nov 2002
publication

Prevalence of streptomycin-resistance genes in bacterial populations in European habitats.

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01 Nov 2002
publication

Gentamicin resistance genes in environmental bacteria: prevalence and transfer.

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01 Oct 2000
publication

Distribution and in-vitro transfer of tetracycline resistance determinants in clinical and aquatic Acinetobacter strains.

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01 Apr 2000
publication

PCR typing of tetracycline resistance determinants (Tet A-E) in Salmonella enterica serotype Hadar and in the microbial community of activated sludges from hospital and urban wastewater treatment facilities in Belgium.

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01 Aug 1999
publication

Safe biotechnology 9: values in risk assessment for the environmental application of microorganisms. The Safety in Biotechnology Working Party of the European Federation of Biotechnology.

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01 Aug 1997
publication

Safe biotechnology. 8. Transport of infectious and biological materials. Working Party “Safety in Biotechnology” of the European Federation of Biotechnology.

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01 Aug 1994
publication

Plasmids for heavy metal resistance in Alcaligenes eutrophus CH34: mechanisms and applications.

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01 Jun 1993
publication

Rapid method for purification of soil DNA for hybridization and PCR analysis.

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01 Feb 1993
publication

A new type of Alcaligenes eutrophus CH34 zinc resistance generated by mutations affecting regulation of the cnr cobalt-nickel resistance system.

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01 Jul 1990
publication

Isolation and genetic analysis of Chlamydomonas reinhardtii strains resistant to cadmium.

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