• 2025
  Chapard C, Bastié N, Cournac A, Chaptal L, Mboumba H, Queille S, Thierry A, Gadal O, Lengronne A, Koszul R, Beckouët F, RNA Pol II-based regulations of chromosome folding., Cell Genom 2025 Aug; (): 100970.
• 2025
  Girard F, Even A, Thierry A, Ruault M, Meneu L, Larrous P, Garnier M, Adiba S, Taddei A, Koszul R, Cournac A, Parasitic plasmids are anchored to inactive regions of eukaryotic chromosomes through a nucleosome signal., EMBO J 2025 Feb; (): .
• 2024
  Bastié N, Chapard C, Cournac A, Nejmi S, Mboumba H, Gadal O, Thierry A, Beckouët F, Koszul R, Sister chromatid cohesion halts DNA loop expansion., Mol Cell 2024 Mar; 84(6): 1139-1148.e5.
• 2022
  Dias JD, Sarica N, Cournac A, Koszul R, Neuveut C, , Crosstalk between Hepatitis B Virus and the 3D Genome Structure., Viruses 2022 02; 14(2): .
• 2022
  Matthey-Doret C, Baudry L, Mortaza S, Moreau P, Koszul R, Cournac A, , Normalization of Chromosome Contact Maps: Matrix Balancing and Visualization., Methods Mol Biol 2022 ; 2301(): 1-15.
• 2020
  Matthey-Doret C, Baudry L, Breuer A, Montagne R, Guiglielmoni N, Scolari V, Jean E, Campeas A, Chanut PH, Oriol E, Méot A, Politis L, Vigouroux A, Moreau P, Koszul R, Cournac A, , Computer vision for pattern detection in chromosome contact maps., Nat Commun 2020 11; 11(1): 5795.
• 2020
  Dauban L, Montagne R, Thierry A, Lazar-Stefanita L, Bastié N, Gadal O, Cournac A, Koszul R, Beckouët F, Regulation of Cohesin-Mediated Chromosome Folding by Eco1 and Other Partners, Mol. Cell 2020 Jan;.
• 2018
  Moreau P, Cournac A, Palumbo GA, Marbouty M, Mortaza S, Thierry A, Cairo S, Lavigne M, Koszul R, Neuveut C, , Tridimensional infiltration of DNA viruses into the host genome shows preferential contact with active chromatin., Nat Commun 2018 Oct; 9(1): 4268.
• 2018
  Baudement MO, Cournac A, Court F, Seveno M, Parrinello H, Reynes C, Sabatier R, Bouschet T, Yi Z, Sallis S, Tancelin M, Rebouissou C, Cathala G, Lesne A, Mozziconacci J, Journot L, Forné T, High-salt-recovered sequences are associated with the active chromosomal compartment and with large ribonucleoprotein complexes including nuclear bodies, Genome Res. 2018 Oct;.
• 2018
  Lioy VS*, Cournac A*, Marbouty M, Duigou S, Mozziconacci J, Espéli O, Boccard F, Koszul R, Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins, Cell 2018 Jan;.
• 2016
  Maya Spichal, Alice Brion, Sébastien Herbert, Axel Cournac, Martial Marbouty, Christophe Zimmer, Romain Koszul, Emmanuelle Fabre, Evidence for actin dual role in regulating chromosome organization and dynamics in yeast, J Cell Sci 2016 : doi: 10.1242/jcs.175745.
• 2016
  Cournac A, Marbouty M, Mozziconacci J, Koszul R, Generation and Analysis of Chromosomal Contact Maps of Yeast Species, Methods Mol Biol. 2016;1361:227-45.
• 2015
  Cournac A, Koszul R, Mozziconacci J, The 3D folding of metazoan genomes correlates with the association of similar repetitive elements, Nucleic Acids Res. 2015 Nov;.
• 2015
  Guidi M, Ruault M, Marbouty M, Loïodice I, Cournac A, Billaudeau C, Hocher A, Mozziconacci J, Koszul R, Taddei A, , Spatial reorganization of telomeres in long-lived quiescent cells., Genome Biol 2015 Sep; 16(1): 206.
• 2015
  Descorps-Declère S, Saguez C, Cournac A, Marbouty M, Rolland T, Ma L, Bouchier C, Moszer I, Dujon B, Koszul R, Richard GF, Genome-wide replication landscape of Candida glabrata, BMC Biol. 2015 Sep;13:69.
• 2015
  Marbouty M, Le Gall A, Cattoni DI, Cournac A, Koh A, Fiche JB, Mozziconacci J, Murray H, Koszul R, Nollmann M, Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging, Mol. Cell 2015 Aug;59(4):588-602.
• 2014
  Marie-Nelly H, Marbouty M, Cournac A, Flot JF, Liti G, Parodi DP, Syan S, Guillén N, Margeot A, Zimmer C, Koszul R, , High-quality genome (re)assembly using chromosomal contact data., Nat Commun 2014 Dec; 5(): 5695.
• 2014
  Marbouty M, Cournac A, Flot JF, Marie-Nelly H, Mozziconacci J, Koszul R, Metagenomic chromosome conformation capture (meta3C) unveils the diversity of chromosome organization in microorganisms, Elife 2014;3:e03318.
• 2014
  Lesne A, Riposo J, Roger P, Cournac A, Mozziconacci J, 3D genome reconstruction from chromosomal contacts, Nat. Methods 2014 Nov;11(11):1141-3.
• 2013
  Cournac A, Plumbridge J, DNA looping in prokaryotes: experimental and theoretical approaches., J Bacteriol. 2013 Mar;195(6):1109-19..
• 2012
  Cournac A, Marie-Nelly H, Marbouty M, Koszul R, Mozziconacci J, Normalization of a chromosomal contact map, BMC Genomics 08/2012; 13(1):436.
• 2012
  Pascal Carrivain, Axel Cournac, Christophe Lavelle, Annick Lesne, Julien Mozziconacci, Fabien Paillusson, Laurence Signon, Jean-Marc Victor and Maria Barbi, Electrostatics of DNA compaction in viruses, bacteria and eukaryotes: Functional insights and evolutionary perspective, Soft Matter, 2012,8, 9285-9301.