Color image analysis in histology
To characterize histopathological images stained by different colorations, we have developed a system to analyse color images. Images are segmented by a split and merge approach and by color quantization, to reduce color classes. We have also defined a criterion to choose […]
Icy: an open community platform for bioimage informatics
We started a project for a new open-source image processing software platform dedicated to community work (de Chaumont et al, Nature Methods 2012). It includes a flexible framework designed around and with a native […]
2017Computer-assisted topological analysis of renal allograft inflammation adds to risk evaluation at diagnosis of humoral rejection, Kidney Int. 2017 07;92(1):214-226.
2017A multicentre study of 95 biopsy-proven cases of renal disease in primary Sjögren’s syndrome, Rheumatology (Oxford) 2017 Mar;56(3):362-370.
2017Essential role of immobilized chemokine CXCL12 in the regulation of the humoral immune response, Proc. Natl. Acad. Sci. U.S.A. 2017 Feb;114(9):2319-2324.
2014Progression of pulse pressure in kidney recipients durably exposed to CsA is a risk factor for epithelial phenotypic changes: an ancillary study of the CONCEPT trial, Transpl. Int. 2014 Apr;27(4):344-52.
2014The intracellular bacteria Chlamydia hijack peroxisomes and utilize their enzymatic capacity to produce bacteria-specific phospholipids, PLoS ONE 2014;9(1):e86196.
2013αTAT1 catalyses microtubule acetylation at clathrin-coated pits, Nature 2013 Oct;502(7472):567-70.
2012Icy: an open bioimage informatics platform for extended reproducible research, Nat. Methods 2012 Jun;9(7):690-6.