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Michel Cohen-Tannoudji

Aurélien Raveux

© Research

Member: Research Engineer

Vannary Meas-Yedid Hardy

• Biological Image Analysis

Laboratory: Biological Image Analysis

PM

Scientific Fields

Diseases

Organisms

Applications

Technique

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11 Publications

Projects

Machine learning methods to predict cancerous areas from Full Field Optical Coherence Tomography (FFOCT) and Dynamical FFOCT images

Vannary Meas-Yedid Hardy (PI)

Color image analysis in histology

Vannary Meas-Yedid Hardy (PI)

To characterize histopathological images stained by different colorations, we have developed a system to analyse color images. Images are segmented by a split and merge approach and by color quantization, to reduce color classes. We have also defined a criterion to choose […]

Software

Icy: an open community platform for bioimage informatics

Stéphane Dallongeville (PI)

We started a project for a new open-source image processing software platform dedicated to community work (de Chaumont et al, Nature Methods 2012). It includes a flexible framework designed around and with a native […]

Publications

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2022

Suvadip Mukherjee, Vannary Meas-Yedid, Marc Bokobza, Thibault Lagache, Alexandre Corthay and Jean-Christophe Olivo-Marin, Spatial Analysis For Histopathology: A Statistical Approach, 2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI).
2021

Alice Koenig, Sarah Mezaache, Jasper Callemeyn, Thomas Barba, Virginie Mathias, Antoine Sicard, Béatrice Charreau, Maud Rabeyrin, Frédérique Dijoud, Cécile Picard, Vannary Meas-Yedid, Jean-Christophe Olivo-Marin, Emmanuel Morelon, Maarten Naesens, Valérie Dubois and Olivier Thaunat, Missing Self-Induced Activation of NK Cells Combines with Non-Complement-Fixing Donor-Specific Antibodies to Accelerate Kidney Transplant Loss in Chronic Antibody-Mediated Rejection, J Am Soc Nephrol . 2021 Feb;32(2):479-494.
2020

Callemeyn J, Lerut E, de Loor H, Arijs I, Thaunat O, Koenig A, Meas-Yedid V, Olivo-Marin JC, Halloran P, Chang J, Thorrez L, Kuypers D, Sprangers B, Van Lommel L, Schuit F, Essig M, Gwinner W, Anglicheau D, Marquet P, Naesens M, , Transcriptional Changes in Kidney Allografts with Histology of Antibody-Mediated Rejection without Anti-HLA Donor-Specific Antibodies., J Am Soc Nephrol 2020 09; 31(9): 2168-2183.
2019

Alice Koenig, Chien-Chia Chen, Antoine Marçais, Thomas Barba, Virginie Mathias, Antoine Sicard, Maud Rabeyrin, Maud Racapé, Jean-Paul Duong-Van-Huyen, Patrick Bruneval, Alexandre Loupy, Sébastien Dussurgey, Stéphanie Ducreux, Vannary Meas-Yedid, Jean-Christophe Olivo-Marin, Héléna Paidassi, Romain Guillemain, Jean-Luc Taupin, Jasper Callemeyn, Emmanuel Morelon, Antonino Nicoletti, Béatrice Charreau, Valérie Dubois, Maarten Naesens, Thierry Walzer, Thierry Defrance & Olivier Thaunat, Missing self triggers NK cell-mediated chronic vascular rejection of solid organ transplants, Nat Commun 10, 5350 (2019).
2017

Sicard A, Meas-Yedid V, Rabeyrin M, Koenig A, Ducreux S, Dijoud F, Hervieu V, Badet L, Morelon E, Olivo-Marin JC, Dubois V, Thaunat O, Computer-assisted topological analysis of renal allograft inflammation adds to risk evaluation at diagnosis of humoral rejection, Kidney Int. 2017 07;92(1):214-226.
2017

Jasiek M, Karras A, Le Guern V, Krastinova E, Mesbah R, Faguer S, Jourde-Chiche N, Fauchais AL, Chiche L, Dernis E, Moulis G, Fraison JB, Lazaro E, Jullien P, Hachulla E, Le Quellec A, Rémy P, Hummel A, Costedoat-Chalumeau N, Ronco P, Vanhille P, Meas-Yedid V, Cordonnier C, Ferlicot S, Daniel L, Seror R, Mariette X, Thervet E, François H, Terrier B, A multicentre study of 95 biopsy-proven cases of renal disease in primary Sjögren’s syndrome, Rheumatology (Oxford) 2017 Mar;56(3):362-370.
2017

Barinov A, Luo L, Gasse P, Meas-Yedid V, Donnadieu E, Arenzana-Seisdedos F, Vieira P, Essential role of immobilized chemokine CXCL12 in the regulation of the humoral immune response, Proc. Natl. Acad. Sci. U.S.A. 2017 Feb;114(9):2319-2324.
2014

Xu-Dubois YC, Hertig A, Lebranchu Y, Hurault de Ligny B, Thervet E, Jauréguy M, Touchard G, Le Pogamp P, Le Meur Y, Toupance O, Heng AE, Bayle F, Girardot-Seguin S, Servais A, Meas-Yedid V, Rondeau E, Progression of pulse pressure in kidney recipients durably exposed to CsA is a risk factor for epithelial phenotypic changes: an ancillary study of the CONCEPT trial, Transpl. Int. 2014 Apr;27(4):344-52.
2014

Boncompain G, Müller C, Meas-Yedid V, Schmitt-Kopplin P, Lazarow PB, Subtil A, The intracellular bacteria Chlamydia hijack peroxisomes and utilize their enzymatic capacity to produce bacteria-specific phospholipids, PLoS ONE 2014;9(1):e86196.
2012

de Chaumont F, Dallongeville S, Chenouard N, Hervé N, Pop S, Provoost T, Meas-Yedid V, Pankajakshan P, Lecomte T, Le Montagner Y, Lagache T, Dufour A, Olivo-Marin JC, Icy: an open bioimage informatics platform for extended reproducible research, Nat. Methods 2012 Jun;9(7):690-6.
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Published on: 11 May 2015 • Modified on: 27 Oct 2015

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