Introduction à l’analyse Bio-informatique de séquences | Research - Institut Pasteur

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Deputy Director of Department
Deputy Director of National Reference Center
Deputy Head of Facility
Director of Center
Director of Department
Director of Institute
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Head of Operations
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Honorary President of the Departement
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Introduction à la Phylogénie Moléculaire : Concepts, méthodes et interprétation

High Throughput Sequencing Data Analysis on Genomics, Metagenomics and Transcriptomics

Scientific Fields

Diseases

Organisms

Applications

Technique

Starting Date

23

Sep 2019

Ending Date

27

Sep 2019

Time

09:00:00

Institut Pasteur, Rue du Docteur Roux, Paris, France

Address

2019-09-23 09:00:00 2019-09-27 17:00:00 Europe/Paris Introduction à l’analyse Bio-informatique de séquences L’objectif de cette formation est de présenter, au travers de l’utilisation d’outils largement utilisés, quelques grands principes sur l’analyse de séquence. L’ensemble de la formation combine exposés théoriques (fondements méthodologiques des programmes) et applications […] Institut Pasteur, Rue du Docteur Roux, Paris, France Corinne Maufrais corinne.maufrais@pasteur.fr

L’objectif de cette formation est de présenter, au travers de l’utilisation d’outils largement utilisés, quelques grands principes sur l’analyse de séquence. L’ensemble de la formation combine exposés théoriques (fondements méthodologiques des programmes) et applications pratiques (mise en relation des notions théoriques avec les paramètres des programmes et les résultats obtenus) pour permettre une utilisation autonome et critique de quelques logiciels d’analyse des séquences biologiques.

Programme:

Jour 1 : Corinne Maufrais
• Matin : Introduction générale et Organisation des banques de données publiques
• Après-midi : Recherche d’information dans les banques de données publiques

Jour 2 : Varun Khanna / Corinne Maufrais
• Matin: Comparaison et alignement de deux séquences. Varun Khanna
• Après-midi : Recherche de séquences similaires dans les banques de données

Jour 3 : Corinne Maufrais
• Matin : Comparaison et alignement multiple de séquences
• Après-midi : Recherche et extraction de motifs (pattern/profils/HMM/logo).

Jour 4 : Damien Mornico
• Introduction à l’annotation de génome

Jour 5 : Frédéric Lemoine
• Introduction à la phylogénie (Cours + TP)

Location

Location: Institut Pasteur, Rue du Docteur Roux, Paris, France

Published on: 12 Sep 2019 • Modified on: 12 Mar 2020

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