Timeline

Etienne Kornobis

Research Engineer

26 Sep 2023

project

Deep Learning group

21 Sep 2023

publication

Susceptibility to Zika virus in a Collaborative Cross mouse strain is induced by Irf3 deficiency in vitro but requires other variants in vivo.

01 Aug 2023

publication

Telomere-to-telomere assemblies of 142 strains characterize the genome structural landscape in Saccharomyces cerevisiae.

23 May 2023

publication

Climate change and vector-borne diseases: a multi-omics approach of temperature-induced changes in the mosquito

11 Apr 2023

publication

Escherichia coli Aggregates Mediated by Native or Synthetic Adhesins Exhibit Both Core and Adhesin-Specific Transcriptional Responses.

03 Jan 2023

news

New publication – Mitochondrial Fission Process 1 controls inner membrane integrity and protects against heart failure

11 Nov 2022

publication

Capturing SARS-CoV-2 from patient samples with low viral abundance: a comparative analysis

04 Nov 2022

publication

Mitochondrial Fission Process 1 controls inner membrane integrity and protects against heart failure.

18 Jun 2022

publication

Complex regulation of Gephyrin splicing is a determinant of inhibitory postsynaptic diversity.

06 May 2022

news

New publication – PDGFRα-induced stromal maturation is required to restrain postnatal intestinal epithelial stemness and promote defense mechanisms

05 May 2022

publication

PDGFRα-induced stromal maturation is required to restrain postnatal intestinal epithelial stemness and promote defense mechanisms.

21 Dec 2021

news

GG speaks Microbes at the Ecole Saint Lambert (Paris 15ème arr.) – 16/12/2021

22 Oct 2021

news

Back on: Science Outreach during the Departmental retreat in Pornichet 2021

24 Aug 2021

course

Analyse de données reproductible

09 Aug 2021

publication

Attenuation of clinical and immunological outcomes during SARS-CoV-2 infection by ivermectin.

29 Jul 2021

news

Ivermectin alleviates COVID-19 symptoms in an animal model

27 Jul 2021

publication

HP1γ binding pre-mRNA intronic repeats modulates RNA splicing decisions.

18 Jun 2021

news

COVID-19: discovery of the mechanisms of short- and long-term anosmia

04 Jun 2021

publication

CD44 alternative splicing senses intragenic DNA methylation in tumors via direct and indirect mechanisms.

02 Jun 2021

publication

COVID-19-related anosmia is associated with viral persistence and inflammation in human olfactory epithelium and brain infection in hamsters.

01 May 2021

publication

The Arabidopsis condensin CAP-D subunits arrange interphase chromatin.

24 Apr 2021

publication

RNase R is associated in a functional complex with the RhpA DEAD-box RNA helicase in Helicobacter pylori.

01 Feb 2021

publication

Myogenesis modelled by human pluripotent stem cells: a multi-omic study of Duchenne myopathy early onset.

01 Jan 2021

publication

CD32+CD4+ T Cells Sharing B Cell Properties Increase With Simian Immunodeficiency Virus Replication in Lymphoid Tissues.

13 Nov 2020

publication

6,11-Dioxobenzo[f]pyrido[1,2-a]indoles Kill Mycobacterium tuberculosis by Targeting Iron-Sulfur Protein Rv0338c (IspQ), A Putative Redox Sensor.

02 Aug 2019

team

Biomics – Dry-Lab

08 May 2019

publication

Expression of endogenous retroviruses reflects increased usage of atypical enhancers in T cells

21 Feb 2019

publication

Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families

27 Sep 2018

tool

Bioconda

25 Sep 2018

publication

Differential gene regulation underlies variation in melanic plumage coloration in the dark-eyed junco (Junco hyemalis)

05 Sep 2018

course

Software Carpentry

19 Jul 2018

project

Bioconvert

02 Jul 2018

publication

Bioconda: sustainable and comprehensive software distribution for the life sciences

27 Jun 2017

publication

Genetic analysis of ciliates living on the groundwater amphipod Crangonyx islandicus (Amphipoda: Crangonyctidae)

26 Jun 2015

team

Bioinformatics and Biostatistics HUB

24 May 2015

publication

TRUFA: A User-Friendly Web Server for de novo RNA-seq Analysis Using Cluster Computing

18 Mar 2015

team

Biomics

01 Feb 2013

publication

The ITS region of groundwater amphipods: length, secondary structure and phylogenetic information content in Crangonyctoids and Niphargids

14 Mar 2012

publication

Classification of Crangonyx islandicus (Amphipoda, Crangonyctidae) based on morphological characters and comparison with molecular phylogenies

04 Aug 2011

publication

Discordance in variation of the ITS region and the mitochondrial COI gene in the subterranean amphipod Crangonyx islandicus

30 Dec 2010

publication

Molecular taxonomy and phylogenetic affinities of two groundwater amphipods, Crangonyx islandicus and Crymostygius thingvallensis, endemic to Iceland

12 May 2010

publication

Molecular evidence of the survival of subterranean amphipods (Arthropoda) during Ice Age underneath glaciers in Iceland

18 Mar 2009

publication

Genetic characterization of the Aphyosemion calliurum species group and description of a new species from this assemblage: A. campomaanense (Cyprinodontiformes: Aplocheiloidei: Nothobranchiidae) from Southern Cameroon

A little guide for advanced search:

Deep Learning group

Susceptibility to Zika virus in a Collaborative Cross mouse strain is induced by Irf3 deficiency in vitro but requires other variants in vivo.

Telomere-to-telomere assemblies of 142 strains characterize the genome structural landscape in Saccharomyces cerevisiae.

Climate change and vector-borne diseases: a multi-omics approach of temperature-induced changes in the mosquito

Escherichia coli Aggregates Mediated by Native or Synthetic Adhesins Exhibit Both Core and Adhesin-Specific Transcriptional Responses.

New publication – Mitochondrial Fission Process 1 controls inner membrane integrity and protects against heart failure

Capturing SARS-CoV-2 from patient samples with low viral abundance: a comparative analysis

Mitochondrial Fission Process 1 controls inner membrane integrity and protects against heart failure.

Complex regulation of Gephyrin splicing is a determinant of inhibitory postsynaptic diversity.

New publication – PDGFRα-induced stromal maturation is required to restrain postnatal intestinal epithelial stemness and promote defense mechanisms

PDGFRα-induced stromal maturation is required to restrain postnatal intestinal epithelial stemness and promote defense mechanisms.

GG speaks Microbes at the Ecole Saint Lambert (Paris 15ème arr.) – 16/12/2021

Back on: Science Outreach during the Departmental retreat in Pornichet 2021

Analyse de données reproductible

Attenuation of clinical and immunological outcomes during SARS-CoV-2 infection by ivermectin.

Ivermectin alleviates COVID-19 symptoms in an animal model

HP1γ binding pre-mRNA intronic repeats modulates RNA splicing decisions.

COVID-19: discovery of the mechanisms of short- and long-term anosmia

CD44 alternative splicing senses intragenic DNA methylation in tumors via direct and indirect mechanisms.

COVID-19-related anosmia is associated with viral persistence and inflammation in human olfactory epithelium and brain infection in hamsters.

The Arabidopsis condensin CAP-D subunits arrange interphase chromatin.

RNase R is associated in a functional complex with the RhpA DEAD-box RNA helicase in Helicobacter pylori.

Myogenesis modelled by human pluripotent stem cells: a multi-omic study of Duchenne myopathy early onset.

CD32+CD4+ T Cells Sharing B Cell Properties Increase With Simian Immunodeficiency Virus Replication in Lymphoid Tissues.

6,11-Dioxobenzo[f]pyrido[1,2-a]indoles Kill Mycobacterium tuberculosis by Targeting Iron-Sulfur Protein Rv0338c (IspQ), A Putative Redox Sensor.

Biomics – Dry-Lab

Expression of endogenous retroviruses reflects increased usage of atypical enhancers in T cells

Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families

Bioconda

Differential gene regulation underlies variation in melanic plumage coloration in the dark-eyed junco (Junco hyemalis)

Software Carpentry

Bioconvert

Bioconda: sustainable and comprehensive software distribution for the life sciences

Genetic analysis of ciliates living on the groundwater amphipod Crangonyx islandicus (Amphipoda: Crangonyctidae)

Bioinformatics and Biostatistics HUB

TRUFA: A User-Friendly Web Server for de novo RNA-seq Analysis Using Cluster Computing

Biomics

The ITS region of groundwater amphipods: length, secondary structure and phylogenetic information content in Crangonyctoids and Niphargids

Classification of Crangonyx islandicus (Amphipoda, Crangonyctidae) based on morphological characters and comparison with molecular phylogenies

Discordance in variation of the ITS region and the mitochondrial COI gene in the subterranean amphipod Crangonyx islandicus

Molecular taxonomy and phylogenetic affinities of two groundwater amphipods, Crangonyx islandicus and Crymostygius thingvallensis, endemic to Iceland

Molecular evidence of the survival of subterranean amphipods (Arthropoda) during Ice Age underneath glaciers in Iceland

Genetic characterization of the Aphyosemion calliurum species group and description of a new species from this assemblage: A. campomaanense (Cyprinodontiformes: Aplocheiloidei: Nothobranchiidae) from Southern Cameroon