Ligne de temps
Rayan Chikhi
Responsable de Structure
24 mars 2024
30 nov. 2023
17 nov. 2023
publication
aKmerBroom: Ancient oral DNA decontamination using Bloom filters on k-mer sets.
Lire plus06 nov. 2023
publication
decOM: similarity-based microbial source tracking of ancient oral samples using k-mer-based methods.
Lire plus30 juin 2023
22 déc. 2022
publication
SVDSS: structural variation discovery in hard-to-call genomic regions using sample-specific strings from accurate long reads.
Lire plus18 nov. 2022
29 juil. 2022
publication
The K-mer File Format: a standardized and compact disk representation of sets of k-mers.
Lire plus06 oct. 2021
14 sept. 2021
publication
Minimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer.
Lire plus26 juil. 2021
news
Strainberry: automated strain separation in low-complexity metagenomes using long reads
Lire plus23 juil. 2021
publication
Strainberry: automated strain separation in low-complexity metagenomes using long reads.
Lire plus27 mai 2021
event
DCB Seminar- C. Titus Brown: “Lightweight and large scale (meta)genome analysis: chasing strain variation across a million genomes!”
Lire plus15 sept. 2020
25 août 2020
24 juin 2019
publication
Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data
Lire plus26 mai 2019
publication
Parallel decompression of gzip-compressed files and random access to DNA sequences
Lire plus03 mai 2019
event
[C3BI Seminar]- Eran Halperin: New computational tools for the analysis of microbiome dynamics
Lire plus27 mars 2019
15 janv. 2019