Timeline

Philippe Pérot

Research Engineer

01 Dec 2024

publication

Broad range molecular detection methods identify only Borrelia spp. in erythema migrans biopsies and blood of tick-bitten patients.

26 Nov 2024

project

Pathogen discovery through clinical metagenomics

22 Nov 2024

publication

Insights into the virome of Hyalomma marginatum in the Danube Delta: a major vector of Crimean-Congo hemorrhagic fever virus in Eastern Europe.

01 Oct 2024

publication

Circovirus Hepatitis in Immunocompromised Patient, Switzerland.

23 May 2024

publication

FLT3L governs the development of partially overlapping hematopoietic lineages in humans and mice.

01 Jan 2024

publication

A quantitative assay for the assessment of cutaneous human papillomaviruses and polyomaviruses over time: A proof-of-concept in two patients with atopic dermatitis and psoriasis.

01 Dec 2023

publication

Performance of clinical metagenomics in France: a prospective observational study.

19 Nov 2023

publication

Human Circovirus is not detected in plasma pools for fractionation.

22 Aug 2023

publication

Chronic Aichi Virus Infection As a Cause of Long-Lasting Multiorgan Involvement in Patients With Primary Immune Deficiencies.

01 Jun 2023

publication

Acute tubulointerstitial nephritis with or without uveitis: a novel form of post-acute COVID-19 syndrome in children.

01 Jun 2023

publication

Late-onset enteric virus infection associated with hepatitis (EVAH) in transplanted SCID patients.

24 May 2023

publication

Virus Pop—Expanding Viral Databases by Protein Sequence Simulation

10 Feb 2023

publication

Golgi localization of SARS-CoV-2 spike protein and interaction with furin in cerebral COVID-19 microangiopathy: a clue to the central nervous system involvement?

01 Feb 2023

publication

Renal arcuate vein thrombosis-induced acute kidney injury: a rare multiple-Hit-mediated disease.

03 Jan 2023

publication

Circovirus Hepatitis Infection in Heart-Lung Transplant Patient, France.

07 Oct 2022

software

Microseek: A Metagenomic Pipeline for Virus Diagnostic and Discovery

14 Sep 2022

publication

Fetal Zika virus infection diagnosed by metagenomic next-generation sequencing in amniotic fluid.

08 Sep 2022

publication

Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery.

01 Jul 2022

publication

Childhood encephalitis in the Greater Mekong region (the SouthEast Asia Encephalitis Project): a multicentre prospective study.

14 Apr 2022

publication

Bat coronaviruses related to SARS-CoV-2 and infectious for human cells.

18 May 2021

publication

Identification of Umbre Orthobunyavirus as a Novel Zoonotic Virus Responsible for Lethal Encephalitis in 2 French Patients With Hypogammaglobulinemia

15 May 2021

publication

First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1.

11 Apr 2021

publication

The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health.

07 Feb 2021

publication

Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results

29 Apr 2020

publication

Investigation of viral etiology in potentially malignant disorders and oral squamous cell carcinomas in non-smoking, non-drinking patients

01 Jan 2020

publication

Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus.

06 Nov 2019

publication

Insights into the Host Range, Genetic Diversity, and Geographical Distribution of Jingmenviruses

12 Aug 2019

publication

Broad-Range Papillomavirus Transcriptome as a Biomarker of Papillomavirus-Associated Cervical High-Grade Cytology

04 Jul 2019

publication

No evidence for viral transcripts in dermatofibrosarcoma protuberans

15 Apr 2019

publication

Cutaneous granulomas with primary immunodeficiency in children: a report of 17 new patients and a review of the literature

10 Jan 2019

publication

Metagenomic analysis identifies human adenovirus 31 in children with acute flaccid paralysis in Tunisia

03 Jan 2019

publication

Rubella Virus-Associated Cutaneous Granulomatous Disease: a Unique Complication in Immune-Deficient Patients, Not Limited to DNA Repair Disorders

01 Jan 2019

publication

RVDB-prot, a reference viral protein database and its HMM profiles [version 2; peer review: 2 approved]

21 Nov 2018

publication

Diagnostiquer les maladies infectieuses à l’ère de la génomique

24 Apr 2018

publication

Murine Endogenous Retroviruses Are Detectable in Patient-Derived Xenografts but Not in Patient-Individual Cell Lines of Human Colorectal Cancer

08 Apr 2017

publication

A comprehensive hybridization model allows whole HERV transcriptome profiling using high density microarray

12 Jan 2017

publication

Astrovirus Diagnostics.

01 Jan 2017

publication

Cutaneous and Visceral Chronic Granulomatous Disease Triggered by a Rubella Virus Vaccine Strain in Children With Primary Immunodeficiencies.

21 Sep 2016

publication

Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia

24 Nov 2015

publication

Expression of young HERV-H loci in the course of colorectal carcinoma and correlation with molecular subtypes

01 Sep 2015

publication

Next-Generation Sequencing for Diagnosis and Tailored Therapy: A Case Report of Astrovirus-Associated Progressive Encephalitis.

11 May 2015

team

Biology of infection

02 Nov 2013

publication

Microarray-based identification of individual HERV loci expression: application to biomarker discovery in prostate cancer

25 Sep 2012

publication

From Viruses to Genes: Syncytins

28 Jun 2012

publication

Microarray-based sketches of the HERV transcriptome landscape

03 Nov 2010

publication

A little guide for advanced search:

Broad range molecular detection methods identify only Borrelia spp. in erythema migrans biopsies and blood of tick-bitten patients.

Pathogen discovery through clinical metagenomics

Insights into the virome of Hyalomma marginatum in the Danube Delta: a major vector of Crimean-Congo hemorrhagic fever virus in Eastern Europe.

Circovirus Hepatitis in Immunocompromised Patient, Switzerland.

FLT3L governs the development of partially overlapping hematopoietic lineages in humans and mice.

A quantitative assay for the assessment of cutaneous human papillomaviruses and polyomaviruses over time: A proof-of-concept in two patients with atopic dermatitis and psoriasis.

Performance of clinical metagenomics in France: a prospective observational study.

Human Circovirus is not detected in plasma pools for fractionation.

Chronic Aichi Virus Infection As a Cause of Long-Lasting Multiorgan Involvement in Patients With Primary Immune Deficiencies.

Acute tubulointerstitial nephritis with or without uveitis: a novel form of post-acute COVID-19 syndrome in children.

Late-onset enteric virus infection associated with hepatitis (EVAH) in transplanted SCID patients.

Virus Pop—Expanding Viral Databases by Protein Sequence Simulation

Golgi localization of SARS-CoV-2 spike protein and interaction with furin in cerebral COVID-19 microangiopathy: a clue to the central nervous system involvement?

Renal arcuate vein thrombosis-induced acute kidney injury: a rare multiple-Hit-mediated disease.

Circovirus Hepatitis Infection in Heart-Lung Transplant Patient, France.

Microseek: A Metagenomic Pipeline for Virus Diagnostic and Discovery

Fetal Zika virus infection diagnosed by metagenomic next-generation sequencing in amniotic fluid.

Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery.

Childhood encephalitis in the Greater Mekong region (the SouthEast Asia Encephalitis Project): a multicentre prospective study.

Bat coronaviruses related to SARS-CoV-2 and infectious for human cells.

Identification of Umbre Orthobunyavirus as a Novel Zoonotic Virus Responsible for Lethal Encephalitis in 2 French Patients With Hypogammaglobulinemia

First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1.

The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health.

Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results

Investigation of viral etiology in potentially malignant disorders and oral squamous cell carcinomas in non-smoking, non-drinking patients

Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus.

Insights into the Host Range, Genetic Diversity, and Geographical Distribution of Jingmenviruses

Broad-Range Papillomavirus Transcriptome as a Biomarker of Papillomavirus-Associated Cervical High-Grade Cytology

No evidence for viral transcripts in dermatofibrosarcoma protuberans

Cutaneous granulomas with primary immunodeficiency in children: a report of 17 new patients and a review of the literature

Metagenomic analysis identifies human adenovirus 31 in children with acute flaccid paralysis in Tunisia

Rubella Virus-Associated Cutaneous Granulomatous Disease: a Unique Complication in Immune-Deficient Patients, Not Limited to DNA Repair Disorders

RVDB-prot, a reference viral protein database and its HMM profiles [version 2; peer review: 2 approved]

Diagnostiquer les maladies infectieuses à l’ère de la génomique

Murine Endogenous Retroviruses Are Detectable in Patient-Derived Xenografts but Not in Patient-Individual Cell Lines of Human Colorectal Cancer

A comprehensive hybridization model allows whole HERV transcriptome profiling using high density microarray

Astrovirus Diagnostics.

Cutaneous and Visceral Chronic Granulomatous Disease Triggered by a Rubella Virus Vaccine Strain in Children With Primary Immunodeficiencies.

Molecular epidemiology of human enterovirus 71 at the origin of an epidemic of fatal hand, foot and mouth disease cases in Cambodia

Expression of young HERV-H loci in the course of colorectal carcinoma and correlation with molecular subtypes

Next-Generation Sequencing for Diagnosis and Tailored Therapy: A Case Report of Astrovirus-Associated Progressive Encephalitis.

Biology of infection

Microarray-based identification of individual HERV loci expression: application to biomarker discovery in prostate cancer

From Viruses to Genes: Syncytins

Microarray-based sketches of the HERV transcriptome landscape

A Comparative Portrait of Retroviral Fusogens and Syncytins