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Scientific Fields
Diseases
Organisms
Applications
Technique
Starting Date
30
Jun 2022
Status
Ongoing
Members
3
Structures
7

About

Palmari is a Python package allowing one to process PALM (photo-activated localization microscopy) movies in order to extract trajectories. The documentation can be found online : https://palmari.readthedocs.io/en/latest/

It has two entry points :

  • it comes as a plugin of the Napari viewer (https://napari.org/)
  • it has a programmatic Python interface so as to be run headlessly. Simple commands allow batches of experiment to be processed with the same protocol, exploiting at best the computing resources available.

Fundings