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2025Viruses of parasites: A roadmap toward diagnostic and therapeutic development., PLoS Negl Trop Dis 2025 Apr; 19(4): e0012982.
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2024Insights into the virome of Hyalomma marginatum in the Danube Delta: a major vector of Crimean-Congo hemorrhagic fever virus in Eastern Europe., Parasit Vectors 2024 Nov; 17(1): 482.
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2024Horseshoe bats from Southeast Asia host a high diversity of Sarbecoviruses, including close ancestors of SARS-CoV-2, 8th World One Health Congress, Sep 2024, Cape Town / Le Cap, South Africa.
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2024Preschool-age children maintain a distinct memory CD4+ T cell and memory B cell response after SARS-CoV-2 infection., Sci Transl Med 2024 Sep; 16(765): eadl1997.
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2024Virological characteristics of a SARS-CoV-2-related bat coronavirus, BANAL-20-236., EBioMedicine 2024 Jun; 104(): 105181.
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2023Virus Pop: Expanding viral databases by protein sequence simulation, International Conference on Clinical Metagenomics 2023, Nov 2023, Genève (Suisse), Switzerland.
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2023Microseek: an innovative approach to unraveling clinical metagenomic secrets, 8th International Conference on Clinical Metagenomics, Nov 2023, Geneva, Switzerland.
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2023Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence., Viruses 2023 Sep; 15(9): .
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2023Comprehensive Characterization of Viral Diversity of Female Mosquitoes in Madagascar., Viruses 2023 Aug; 15(9): .
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2023Longitudinal Study of Viral Diversity Associated with Mosquito Species Circulating in Cambodia., Viruses 2023 Aug; 15(9): .
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2023Acute tubulointerstitial nephritis with or without uveitis: a novel form of post-acute COVID-19 syndrome in children., Kidney Int 2023 Jun; 103(6): 1193-1198.
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2023Virus Pop-Expanding Viral Databases by Protein Sequence Simulation., Viruses 2023 May; 15(6): .
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2023SARS-CoV-2-related bat virus behavior in human-relevant models sheds light on the origin of COVID-19., EMBO Rep 2023 Apr; 24(4): e56055.
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2023A Search for Tick-Associated, Bronnoya-like Virus Spillover into Sheep., Microorganisms 2023 Jan; 11(1): .
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2023Diversity of Viruses in Ixodes ricinus in Europe including Novel and Potential Arboviruses., Transbound Emerg Dis 2023 ; 2023(): 6661723.
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2022Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery., Viruses 2022 Sep; 14(9): .
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2022Seroprevalence of Crimean-Congo Hemorrhagic Fever Among Small Ruminants from Southern Romania., Vector Borne Zoonotic Dis 2022 Jul; 22(7): 397-401.
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2022Author Correction: Bat coronaviruses related to SARS-CoV-2 and infectious for human cells., Nature 2022 Jul; 607(7920): E19.
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2022Bat coronaviruses related to SARS-CoV-2 and infectious for human cells., Nature 2022 Apr; 604(7905): 330-336.
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2022Detection of Phenuiviridae, Chuviridae Members, and a Novel Quaranjavirus in Hard Ticks From Danube Delta., Front Vet Sci 2022 ; 9(): 863814.
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2022De nouveaux coronavirus de chauve-souris similaires à SARS-CoV-2 éclairent l’origine de la pandémie de COVID-19, Journées Francophones de Virologie, Apr 2022, Strasbourg, France.
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2022Discovery of bat coronaviruses close to SARS-CoV-2 and infectious for human cells., Nautre 604 (2022) 330.
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2021Coronaviruses with a SARS-CoV-2-like receptor-binding domain allowing ACE2-mediated entry into human cells isolated from bats of Indochinese peninsula, 2021.
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2021Low seroprevalence of COVID-19 in Lao PDR, late 2020., Lancet Reg Health West Pac 2021 Aug; 13(): 100197.
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2021Identification of Umbre Orthobunyavirus as a Novel Zoonotic Virus Responsible for Lethal Encephalitis in 2 French Patients with Hypogammaglobulinemia., Clin Infect Dis 2021 May; 72(10): 1701-1708.
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2021Arterial abnormalities identified in kidneys transplanted into children during the COVID-19 pandemic., Am J Transplant 2021 May; 21(5): 1937-1943.
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2021Une infection antérieure par des coronavirus saisonniers n’empêche pas la COVID-19 chez les enfants., Journées Francophones de Virologie, Apr 2021, Montpellier, France.
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2021The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health., Transbound Emerg Dis 2022 May; 69(3): 1387-1403.
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2021Faune sauvage et SARS-CoV-2 : exposition des animaux de zoo pendant la circulation du virus en France en 2020., Journées Francophones de Virologie, Apr 2021, Montpellier, France.
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2021Identification d’un nouvel arbovirus neurotrope en France : le virus Umbre, XXIIIèmes Journées Francophones de Virologie, Apr 2021, Montpellier, France.
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2021SARS-CoV-2 infection in schools in a northern French city: a retrospective serological cohort study in an area of high transmission, France, January to April 2020., Euro Surveill 2021 Apr; 26(15): .
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2021Prior infection by seasonal coronaviruses, as assessed by serology, does not prevent SARS-CoV-2 infection and disease in children, France, April to June 2020., Euro Surveill 2021 Apr; 26(13): .
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2021Immunological and virological profile of children with chilblain‐like lesions and SARS‐CoV‐2, Journal of the European Academy of Dermatology and Venereology, 2021, 35 (3), pp.e164-e167. ⟨10.1111/jdv.16972⟩.
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2021Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results., Viruses 2021 Feb; 13(2): .
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2020RVDB-prot, a reference viral protein database and its HMM profiles., F1000Res 2019 ; 8(): 530.
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2020A comparison of four serological assays for detecting anti-SARS-CoV-2 antibodies in human serum samples from different populations., Sci Transl Med 2020 Sep; 12(559): .
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2020Cluster of COVID-19 in northern France: A retrospective closed cohort study, 2021.
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2020Whole genome sequencing and phylogenetic characterization of a novel bat-associated picornavirus-like virus with an unusual genome organization., Infect Genet Evol 2020 Mar; 78(): 104130.
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2020Viromics on Honey-Baited FTA Cards as a New Tool for the Detection of Circulating Viruses in Mosquitoes., Viruses 2020 Feb; 12(3): .
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2020RNA Viruses of Amblyomma variegatum and Rhipicephalus microplus and Cattle Susceptibility in the French Antilles., Viruses 2020 Jan; 12(2): .
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2020Absence of SARS-CoV-2 infection in cats and dogs in close contact with a cluster of COVID-19 patients in a veterinary campus., One Health 2020 Dec; 10(): 100164.
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2019Six Nearly Complete Genome Segments of a Novel Reovirus Identified in Laotian Batflies., Microbiol Resour Announc 2019 Nov; 8(46): .
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2019Insights into the Host Range, Genetic Diversity, and Geographical Distribution of Jingmenviruses., mSphere 2019 Nov; 4(6): .
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2019Monitoring Silent Spillovers Before Emergence: A Pilot Study at the Tick/Human Interface in Thailand., Front Microbiol 2019 ; 10(): 2315.
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2019A Novel Polycipiviridae Virus Identified in Pteropus lylei Stools., Microbiol Resour Announc 2019 Apr; 8(15): .
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2018Protocol for Generating Infectious RNA Viromes from Complex Biological Samples., Methods Mol Biol 2018 ; 1838(): 25-36.
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2017Screening for Viral Pathogens in African Simian Bushmeat Seized at A French Airport., Transbound Emerg Dis 2017 Aug; 64(4): 1159-1167.
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2016Zoonotic viruses: how to monitor their emergence?, Virologie (Montrouge) 2016 Aug; 20(4): 231-244.
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2016A new asfarvirus infecting amoebas discovered in hematophagous arthropods and their vertebrate hosts., Virologie (Montrouge) 2016 Aug; 20(4): 245-247.
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2016Characterization of Viral Communities of Biting Midges and Identification of Novel Thogotovirus Species and Rhabdovirus Genus., Viruses 2016 Mar; 8(3): 77.
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2016Viral metagenomics: are we missing the giants?, Curr. Opin. Microbiol. 2016 06;31:34-43.
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2015Faustovirus-Like Asfarvirus in Hematophagous Biting Midges and Their Vertebrate Hosts., Front Microbiol 2015 ; 6(): 1406.
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2015Host-Associated Metagenomics: A Guide to Generating Infectious RNA Viromes., PLoS One 2015 ; 10(10): e0139810.
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2014First molecular detection of Rickettsia africae in ticks from the Union of the Comoros., Parasit Vectors 2014 Sep; 7(): 444.
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2014Viral metagenomics on animals as a tool for the detection of zoonoses prior to human infection?, Int J Mol Sci 2014 Jun; 15(6): 10377-97.
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2014Development of real-time RT-PCR for the detection of low concentrations of Rift Valley fever virus., J Virol Methods 2014 Jan; 195(): 92-9.
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2013High prevalence of hepatitis E in humans and pigs and evidence of genotype-3 virus in swine, Madagascar., Am J Trop Med Hyg 2013 Feb; 88(2): 329-38.
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2013Describing the silent human virome with an emphasis on giant viruses., Intervirology 2013 ; 56(6): 395-412.
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2012Identification of novel paramyxoviruses in insectivorous bats of the Southwest Indian Ocean., Virus Res 2012 Dec; 170(1-2): 159-63.
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2012Pathogenic Leptospira spp. in bats, Madagascar and Union of the Comoros., Emerg Infect Dis 2012 Oct; 18(10): 1696-8.
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2012Influenza A(H1N1)pdm09 virus in pigs, Réunion Island., Emerg Infect Dis 2012 Oct; 18(10): 1665-8.
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2012Adhesion of human pathogenic enteric viruses and surrogate viruses to inert and vegetal food surfaces., Food Microbiol 2012 Oct; 32(1): 48-56.
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2012Intense co-circulation of non-influenza respiratory viruses during the first wave of pandemic influenza pH1N1/2009: a cohort study in Reunion Island., PLoS One 2012 ; 7(9): e44755.
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2012Molecular evolutionary analysis of pH1N1 2009 influenza virus in Reunion Island, South West Indian Ocean region: a cohort study., PLoS One 2012 ; 7(8): e43742.
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2011Comparison of chlorine and peroxyacetic-based disinfectant to inactivate Feline calicivirus, Murine norovirus and Hepatitis A virus on lettuce., Int J Food Microbiol 2011 Nov; 151(1): 98-104.
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2011Pandemic influenza due to pH1N1/2009 virus: estimation of infection burden in Reunion Island through a prospective serosurvey, austral winter 2009., PLoS One 2011 ; 6(9): e25738.
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2010A predictive microbiology approach for thermal inactivation of Hepatitis A virus in acidified berries., Food Microbiol 2010 Oct; 27(7): 962-7.
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2009Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies in the Mediterranean., Vector Borne Zoonotic Dis 2009 Oct; 9(5): 519-30.
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2009Development and validation of real-time one-step reverse transcription-PCR for the detection and typing of dengue viruses., J Clin Virol 2009 May; 45(1): 61-6.
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2008Sandfly fever Sicilian virus, Algeria., Emerg Infect Dis 2008 May; 14(5): 795-7.
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2007Cocirculation of 2 genotypes of Toscana virus, southeastern France., Emerg Infect Dis 2007 Mar; 13(3): 465-8.
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2007A real-time RT-PCR method for the universal detection and identification of flaviviruses, Vector Borne Zoonotic Dis. 2007;7(4):467-77.
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2007Long PCR Product Sequencing (LoPPS): a shotgun-based approach to sequence long PCR products., Nat Protoc 2007 ; 2(2): 340-6.
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2007Alkhurma hemorrhagic fever virus in Ornithodoros savignyi ticks., Emerg Infect Dis 2007 Jan; 13(1): 153-5.
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2006Toscana virus RNA in Sergentomyia minuta files., Emerg Infect Dis 2006 Aug; 12(8): 1299-300.
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2006LoPPS: a long PCR product sequencing method for rapid characterisation of long amplicons., Biochem Biophys Res Commun 2006 Jun; 344(4): 1080-5.