• 2025
  Cardona AH, Peixoto MM, Borjigin T, Gregor T, Bridging spatial and temporal scales of developmental gene regulation., Curr Opin Genet Dev 2025 Mar; 92(): 102328.
• 2025
  Sokolowski TR, Gregor T, Bialek W, Tkačik G, Deriving a genetic regulatory network from an optimization principle., Proc Natl Acad Sci U S A 2025 Jan; 122(1): e2402925121.
• 2024
  Merle M, Friedman L, Chureau C, Shoushtarizadeh A, Gregor T, Precise and scalable self-organization in mammalian pseudo-embryos., Nat Struct Mol Biol 2024 Mar; (): .
• 2023
  Brückner DB, Chen H, Barinov L, Zoller B, Gregor T, Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome., Science 2023 Jun; 380(6652): 1357-1362.
• 2023
  Davidescu MR, Romanczuk P, Gregor T, Couzin ID, , Growth produces coordination trade-offs in Trichoplax adhaerens, an animal lacking a central nervous system., Proc Natl Acad Sci U S A 2023 Mar; 120(11): e2206163120.
• 2023
  Netta Haroush, Michal Levo, Eric Wieschaus, Thomas Gregor, Functional analysis of the Drosophila eve locus in response to non-canonical combinations of gap gene expression levels, Developmental Cell, In press, ⟨10.1016/j.devcel.2023.10.001⟩.
• 2022
  Rossine FW, Vercelli GT, Tarnita CE, Gregor T, , Structured foraging of soil predators unveils functional responses to bacterial defenses., Proc Natl Acad Sci U S A 2022 Dec; 119(52): e2210995119.
• 2022
  Benjamin Zoller, Thomas Gregor, Gašper Tkačik, Eukaryotic gene regulation at equilibrium, or non?, Curr. Opin. Syst. Biol. 2022 Sep;31:100435..
• 2022
  Voortman L, Anderson C, Urban E, Yuan L, Tran S, Neuhaus-Follini A, Derrick J, Gregor T, Johnston RJ, , Temporally dynamic antagonism between transcription and chromatin compaction controls stochastic photoreceptor specification in flies., Dev Cell 2022 08; 57(15): 1817-1832.e5.
• 2022
  Seyboldt R, Lavoie J, Henry A, Vanaret J, Petkova MD, Gregor T, François P, , Latent space of a small genetic network: Geometry of dynamics and information., Proc Natl Acad Sci U S A 2022 06; 119(26): e2113651119.
• 2022
  Nollmann M, Bennabi I, Götz M, Gregor T, , The Impact of Space and Time on the Functional Output of the Genome., Cold Spring Harb Perspect Biol 2022 05; 14(4): .
• 2022
  Levo M, Raimundo J, Bing XY, Sisco Z, Batut PJ, Ryabichko S, Gregor T, Levine MS, , Transcriptional coupling of distant regulatory genes in living embryos., Nature 2022 05; 605(7911): 754-760.
• 2022
  Singh AP, Wu P, Ryabichko S, Raimundo J, Swan M, Wieschaus E, Gregor T, Toettcher JE, , Optogenetic control of the Bicoid morphogen reveals fast and slow modes of gap gene regulation., Cell Rep 2022 03; 38(12): 110543.
• 2021
  Bauer M, Petkova MD, Gregor T, Wieschaus EF, Bialek W, , Trading bits in the readout from a genetic network., Proc Natl Acad Sci U S A 2021 11; 118(46): .
• 2021
  Wang MD, Nicodemi M, Dekker NH, Gregor T, Holcman D, van Oijen AM, Manley S, , Physics meets biology: The joining of two forces to further our understanding of cellular function., Mol Cell 2021 08; 81(15): 3033-3037.
• 2021
  Tkačik G, Gregor T, , The many bits of positional information., Development 2021 02; 148(2): .
• 2020
  Lev Barinov, Sergey Ryabichko, William Bialek, Thomas Gregor, Transcription-dependent spatial organization of a gene locus, arXiv.org:1912.08579 [q-bio.SC].
• 2020
  Rossine FW, Martinez-Garcia R, Sgro AE, Gregor T, Tarnita CE, , Eco-evolutionary significance of “loners”., PLoS Biol 2020 03; 18(3): e3000642.
• 2020
  Chen H, Gregor T, , Using RNA Tags for Multicolor Live Imaging of Chromatin Loci and Transcription in Drosophila Embryos., Methods Mol Biol 2020 ; 2166(): 373-384.
• 2019
  William Bialek, Thomas Gregor, Gašper Tkačik, Action at a distance in transcriptional regulation, arXiv:1912.08579 [q-bio.SC].
• 2019
  Petkova MD, Tkačik G, Bialek W, Wieschaus EF, Gregor T, Optimal Decoding of Cellular Identities in a Genetic Network, Cell 2019 Feb 7;176(4):844-855.e15.
• 2018
  Zoller B, Little SC, Gregor T, Diverse Spatial Expression Patterns Emerge from Unified Kinetics of Transcriptional Bursting, Cell 2018 Oct;175(3):835-847.e25.
• 2018
  Chen H, Levo M, Barinov L, Fujioka M, Jaynes JB, Gregor T, Dynamic interplay between enhancer-promoter topology and gene activity, Nat. Genet. 2018 Sep;50(9):1296-1303.
• 2018
  Little SC, Gregor T, , Single mRNA Molecule Detection in Drosophila., Methods Mol Biol 2018 ; 1649(): 127-142.