Max Bonomi

Dec 2025

Artificial Intelligence at the Institut Pasteur

Artificial Intelligence (AI) in Neurosciences hands-on workshop

This workshop provides training in modelling and model-driven analysis of neuroscience experimental data. We will cover fundamental principles of neural data analysis, behaviour video data and show recent progress in these approaches. The workshop […]

2025-12-03 09:00:00 2025-12-03 17:00:00 Europe/Paris Artificial Intelligence (AI) in Neurosciences hands-on workshop This workshop provides training in modelling and model-driven analysis of neuroscience experimental data. We will cover fundamental principles of neural data analysis, behaviour video data and show recent progress in these approaches. The workshop […] Pasteur Institute, Rue du Docteur Roux, Paris, France

Nov 2025

Artificial Intelligence at the Institut Pasteur

Artificial Intelligence (AI) in Structural Biology hands-on workshop

Part 1. Critical use of AI for 3D structure prediction Instructors: Benjamin Bardiaux (Permanent researcher in the Bacterial Transmembrane Systems Unit at Institut Pasteur) & Ludovic Sauguet (Research director in the Architecture & Dynamics […]

2025-11-13 09:00:00 2025-11-13 17:00:00 Europe/Paris Artificial Intelligence (AI) in Structural Biology hands-on workshop Part 1. Critical use of AI for 3D structure prediction Instructors: Benjamin Bardiaux (Permanent researcher in the Bacterial Transmembrane Systems Unit at Institut Pasteur) & Ludovic Sauguet (Research director in the Architecture & Dynamics […] Pasteur Institute, Rue du Docteur Roux, Paris, France

Oct 2025

Artificial Intelligence at the Institut Pasteur

Artificial Intelligence (AI) in Genomics hands-on workshop

Part 1. Fine-tuning biological LLMs for functional classification Intructor: Ernest Mordret (postdoctoral researcher at the Institut Pasteur) Large Language Models (LLMs) are revolutionizing biology! They capture intricate patterns within DNA and protein sequences through […]

2025-10-30 09:00:00 2025-10-30 17:00:00 Europe/Paris Artificial Intelligence (AI) in Genomics hands-on workshop Part 1. Fine-tuning biological LLMs for functional classification Intructor: Ernest Mordret (postdoctoral researcher at the Institut Pasteur) Large Language Models (LLMs) are revolutionizing biology! They capture intricate patterns within DNA and protein sequences through […] Pasteur Institute, Rue du Docteur Roux, Paris, France

Mar 2025

AI for Life Sciences Theoretical Workshop for Pasteur PhD students

In 2024, at the request of Yasmine Belkaid, General Director of the Institut Pasteur, a Theoretical Workshop is offered to all Pasteur PhD candidates to strengthen research capabilities in areas such as image processing, […]

2025-03-17 09:00:00 2025-03-19 12:15:00 Europe/Paris AI for Life Sciences Theoretical Workshop for Pasteur PhD students In 2024, at the request of Yasmine Belkaid, General Director of the Institut Pasteur, a Theoretical Workshop is offered to all Pasteur PhD candidates to strengthen research capabilities in areas such as image processing, […] Pasteur Institute, Rue du Docteur Roux, Paris, France

Transversal Projects

Artificial Intelligence at the Institut Pasteur

Institut Pasteur is actively engaged in the application of artificial intelligence methods in biomedical research. In 2018, the Institute has created a Department of Computational Biology to strengthen its expertise in the analysis of […]

Projects

Project

2 Members

Targeting RNA structure and dynamics with small molecules

Integrative modelling of protein structure and dynamics with cryo-EM

Cryo-EM has greatly expanded our understanding of the structure and function of many important biological systems. The next challenges now concern the responses to the following questions. When advanced classification techniques of single-particle images […]

Software

2 Members

PLUMED

PLUMED is an open-source library for free-energy calculations in molecular systems, which works together with some of the most popular molecular dynamics engines. Free-energy calculations can be performed as a function of many order […]

Software

3 Members

Integrative Modelling Platform

Riccardo Pellarin (PI)

IMP‘s broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies, by integrating data from diverse biochemical and biophysical experiments. […]

Tools

Tool

6 Members

HARIBOSS

HARIBOSS is a database of RNA-small molecules structures retrieved from the PDB database. HARIBOSS is regularly updated with all the structures resolved by X-ray, NMR, and cryo-EM, in which ligands with drug-like properties interact […]

Tool

2 Members

PLUMED-NEST