Scientific interests: optimization, search (meta)heuristics, explainable artificial intelligence, machine learning, algorithm design and engineering, graph mining, semantic knowledge graphs, reproducibility, systems biomedicine. I’m currently working on: Wants to know (a lot) more? See my […]
I am a post-doctoral researcher in infectious disease epidemiology and modelling at Institut Pasteur and Centre de recherche en épidémiologie et santé des populations (CESP) at INSERM. I work closely with Lulla Opatowski, Didier […]
I am a CNRS researcher and group leader of the “Integrative structural biology of dynamic systems” team in the “Structural Bioinformatics Unit”. For more information about my research, please visit the page of my […]
Luc Blassel’s PhD project, funded by PRAIRIE, is to apply machine learning techniques to the analysis of sequence data. Traditional sequence alignment and analysis methods might not be able to perform as well as […]
I’m a research engineer working on web development, data visualization and integration, and container technologies. A recent example of my skills is ViralHostRangeDB [Lamy-Besnier et al., 2021] I graduated as an engineer in computer […]
Physicist and computer scientist by training, I develop quantitative population models of antibiotic resistance, which I calibrate using optimal experimental design. I then exploit them to engineer optimal treatment strategies.
As a bioinformatics engineer, I design analysis methods to extract sequences of known or novel pathogens from metagenomic sequencing data of animal or clinical samples. My work involves evaluating existing methods based on local […]