Publications

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2021

Marbouty M, Thierry A, Millot GA, Koszul R, , MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut., Elife 2021 Feb; 10(): .
2021

Gauthier J, Boulain H, van Vugt JJFA, Baudry L, Persyn E, Aury JM, Noel B, Bretaudeau A, Legeai F, Warris S, Chebbi MA, Dubreuil G, Duvic B, Kremer N, Gayral P, Musset K, Josse T, Bigot D, Bressac C, Moreau S, Periquet G, Harry M, Montagné N, Boulogne I, Sabeti-Azad M, Maïbèche M, Chertemps T, Hilliou F, Siaussat D, Amselem J, Luyten I, Capdevielle-Dulac C, Labadie K, Merlin BL, Barbe V, de Boer JG, Marbouty M, Cônsoli FL, Dupas S, Hua-Van A, Le Goff G, Bézier A, Jacquin-Joly E, Whitfield JB, Vet LEM, Smid HM, Kaiser L, Koszul R, Huguet E, Herniou EA, Drezen JM, , Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization., Commun Biol 2021 Jan; 4(1): 104.
2020

Böhm K, Giacomelli G, Schmidt A, Imhof A, Koszul R, Marbouty M, Bramkamp M, , Chromosome organization by a conserved condensin-ParB system in the actinobacterium Corynebacterium glutamicum., Nat Commun 2020 Mar; 11(1): 1485.
2018

Moreau P, Cournac A, Palumbo GA, Marbouty M, Mortaza S, Thierry A, Cairo S, Lavigne M, Koszul R, Neuveut C, Tridimensional infiltration of DNA viruses into the host genome shows preferential contact with active chromatin, Nat Commun 2018 Oct;9(1):4268.
2018

Lioy VS*, Cournac A*, Marbouty M, Duigou S, Mozziconacci J, Espéli O, Boccard F, Koszul R, Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins, Cell 2018 Jan;.
2017

Jourdier E, Baudry L, Poggi-Parodi D, Vicq Y, Koszul R, Margeot A, Marbouty M, Bidard F, Proximity ligation scaffolding and comparison of two Trichoderma reesei strains genomes, Biotechnol Biofuels 2017;10:151.
2017

Marbouty M, Baudry L, Cournac A, Koszul R, Scaffolding bacterial genomes and probing host-virus interactions in gut microbiome by proximity ligation (chromosome capture) assay, Sci Adv 2017 Feb;3(2):e1602105.
2017

Marbouty M, Koszul R, Generation and Analysis of Chromosomal Contact Maps of Bacteria, Methods Mol. Biol. 2017;1624:75-84.
2016

Val ME, Marbouty M, de Lemos Martins F, Kennedy SP, Kemble H, Bland MJ, Possoz C, Koszul R, Skovgaard O, Mazel D., A checkpoint control orchestrates the replication of the two chromosomes of Vibrio cholerae., Sci Adv. 2016 Apr 22;2(4):e1501914. doi: 10.1126/sciadv.1501914.
2016

Maya Spichal, Alice Brion, Sébastien Herbert, Axel Cournac, Martial Marbouty, Christophe Zimmer, Romain Koszul, Emmanuelle Fabre, Evidence for actin dual role in regulating chromosome organization and dynamics in yeast, J Cell Sci 2016 : doi: 10.1242/jcs.175745.
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A little guide for advanced search:

Martial Marbouty

• Spatial Regulation of Genomes

Software

instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder

GRAAL: genome assembly from chromosome contact frequencies

META3C (MetaHiC), metaTOR

Publications