Timeline
Francois-Xavier Weill
Head of Structure
27 Sep 2023
project
Tableaux épidémio-clinico-biologiques des infections à Salmonella enterica sérotype Paratyphi C et 6,7:c:- et 6,7 :- :- du même groupe clonal en France – TAPAS
Read more08 Apr 2023
publication
The evolution and international spread of extensively drug resistant Shigella sonnei
Read more28 Jan 2023
01 Jan 2023
publication
Countrywide multi-serotype outbreak of Salmonella Bovismorbificans ST142 and monophasic Salmonella Typhimurium ST34 associated with dried pork sausages in France, September 2020* to January 2021.
Read more22 Mar 2022
03 Feb 2022
27 Jan 2022
publication
Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing.
Read more05 Jul 2021
project
The SARA project: Surveillance of Antibiotic Resistance in Africa, an integrative project of the Pasteur Network
Read more01 Mar 2021
publication
Stepwise evolution of Salmonella Typhimurium ST313 causing bloodstream infection in Africa.
Read more01 Jan 2021
30 Dec 2020
publication
Endocannabinoids Attenuate the Virulence of Certain Enteropathogenic Bacteria.
Read more22 Oct 2020
13 Aug 2020
01 Jun 2020
publication
Antimicrobial Resistance in Salmonella enterica Serovar Paratyphi B Variant Java in Poultry from Europe and Latin America.
Read more01 Jan 2020
publication
The EnteroBase user’s guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity.
Read more01 Jan 2020
01 Dec 2019
publication
Serotype distribution and antimicrobial resistance of human Salmonella enterica in Bangui, Central African Republic, from 2004 to 2013.
Read more23 Oct 2019
publication
Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei.
Read more01 Sep 2019
publication
Clinical Evaluation of a Multiplex PCR for the Detection of Salmonella enterica Serovars Typhi and Paratyphi A from Blood Specimens in a High-Endemic Setting.
Read more01 Sep 2019
publication
Salmonella enterica Serovar Panama, an Understudied Serovar Responsible for Extraintestinal Salmonellosis Worldwide.
Read more01 Aug 2019
19 Jul 2019
19 Jul 2019
19 Jul 2019
01 Jul 2019
publication
Global phylogenomics of multidrug-resistant Salmonella enterica serotype Kentucky ST198.
Read more01 May 2019
publication
Outbreak of Shiga toxin-producing Escherichia coli (STEC) O26 paediatric haemolytic uraemic syndrome (HUS) cases associated with the consumption of soft raw cow’s milk cheeses, France, March to May 2019.
Read more07 Mar 2019
publication
Complement Gene Variants and Shiga Toxin-Producing Escherichia coli-Associated Hemolytic Uremic Syndrome: Retrospective Genetic and Clinical Study.
Read more01 Mar 2019
publication
Outbreak of Salmonella enterica serotype Poona in infants linked to persistent Salmonella contamination in an infant formula manufacturing facility, France, August 2018 to February 2019.
Read more01 Feb 2019
publication
Paediatric haemolytic uraemic syndrome related to Shiga toxin-producing Escherichia coli, an overview of 10 years of surveillance in France, 2007 to 2016.
Read more01 Jan 2019
01 Jan 2019
publication
Revisiting the Global Epidemiology of Cholera in Conjuction With the Genomics of Vibrio cholerae.
Read more01 Jan 2019
publication
Reptiles in Guadeloupe (French West Indies) are a reservoir of major human Salmonella enterica serovars.
Read more01 Jan 2019
publication
A Simple and Robust Statistical Method to Define Genetic Relatedness of Samples Related to Outbreaks at the Genomic Scale – Application to Retrospective Salmonella Foodborne Outbreak Investigations.
Read more18 May 2018
publication
Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens
Read more13 Apr 2018
publication
Horizontal antimicrobial resistance transfer drives epidemics of multiple Shigella species
Read more04 Dec 2017
29 Nov 2017
publication
Early transmissible ampicillin resistance in zoonotic Salmonella enterica serotype Typhimurium in the late 1950s: a retrospective, whole-genome sequencing study
Read more10 Nov 2017
10 Nov 2017
20 Sep 2017
publication
The clinical and microbiological characteristics of enteric fever in Cambodia, 2008-2015
Read more30 Nov 2016
30 Nov 2016
publication
Genomic analysis of Salmonella enterica serotype Paratyphi A during an outbreak in Cambodia, 2013-2015
Read more05 Oct 2016
publication
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid
Read more03 Oct 2016
publication
Erratum: Global phylogeography and evolutionary history of Shigella dysenteriae type 1
Read more22 Sep 2016
publication
Molecular Surveillance Identifies Multiple Transmissions of Typhoid in West Africa
Read more01 Sep 2016
publication
Travel- and Community-Based Transmission of Multidrug-Resistant Shigella sonnei Lineage among International Orthodox Jewish Communities
Read more23 Aug 2016
publication
What’s in a Name? Species-Wide Whole-Genome Sequencing Resolves Invasive and Noninvasive Lineages of Salmonella enterica Serotype Paratyphi B
Read more22 Aug 2016
publication
Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings
Read more01 Aug 2016
publication
Characterisation of new Salmonella serovars by whole genome sequencing and traditional typing techniques
Read more01 Jul 2016
22 Mar 2016
22 Mar 2016
project
Phylogenomics of Shiga’s epidemic dysentery bacillus (Shigella dysenteriae type 1)
Read more21 Mar 2016
publication
Global phylogeography and evolutionary history of Shigella dysenteriae type 1.
Read more04 Mar 2016
11 Feb 2016
publication
A Phylogenetic and Phenotypic Analysis of Salmonella enterica Serovar Weltevreden, an Emerging Agent of Diarrheal Disease in Tropical Regions
Read more01 Jan 2016
30 Oct 2015
16 Sep 2015
publication
One-step identification of five prominent chicken Salmonella serovars and biotypes
Read more16 Sep 2015
publication
Carbapenemase-producing Salmonella enterica serotype Kentucky ST198, North Africa
Read more04 Aug 2015
publication
Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri
Read more27 Jul 2015
27 Jul 2015
27 Jul 2015
02 Jul 2015
04 Jun 2015
11 May 2015
11 May 2015
publication
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events
Read more29 Apr 2015
publication
Rapid Genotyping of Shigella sonnei by Use of Multiplex High-Resolution Melting
Read more27 Apr 2015
publication
Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study
Read more23 Mar 2015
publication
Enteric bacterial pathogens in children with diarrhea in Niger: diversity and antimicrobial resistance
Read more04 Aug 2014
publication
Transient Darwinian selection in Salmonella enterica serovar Paratyphi A during 450 years of global spread of enteric fever
Read more15 Jul 2014
03 Feb 2014
30 Jan 2014
publication
CRISPR is an optimal target for the design of specific PCR assays for salmonella enterica serotypes Typhi and Paratyphi A
Read more27 Jan 2014
publication
Lack of efflux mediated quinolone resistance in Salmonella enterica serovars Typhi and Paratyphi A
Read more18 Dec 2013
publication
The global establishment of a highly-fluoroquinolone resistant Salmonella enterica serotype Kentucky ST198 strain
Read more19 Oct 2013
publication
Targeting relaxase genes for classification of the predominant plasmids in Enterobacteriaceae
Read more28 May 2013
publication
Highly drug-resistant Salmonella enterica serotype Kentucky ST198-X1: a microbiological study
Read more02 Jan 2013
publication
Evaluation of CHROMagar STEC and STEC O104 chromogenic agar media for detection of Shiga Toxin-producing Escherichia coli in stool specimens
Read more10 Dec 2012
16 Jul 2012
publication
Early strains of multidrug-resistant Salmonella enterica serovar Kentucky sequence type 198 from Southeast Asia harbor Salmonella genomic island 1-J variants with a novel insertion sequence
Read more18 May 2012
publication
CRISPR typing and subtyping for improved laboratory surveillance of Salmonella infections
Read more01 Jan 2012
02 Aug 2011
publication
International spread of an epidemic population of Salmonella enterica serotype Kentucky ST198 resistant to ciprofloxacin
Read more01 Jun 2011
publication
Salmonella enterica Serotype Typhi with nonclassical quinolone resistance phenotype
Read more16 Jan 2011
publication
Prevalence and characterization of extended-spectrum beta-lactamases-producing Salmonella enterica isolates in Saragossa, Spain (2001-2008)
Read more01 Nov 2010
02 Nov 2009
publication
Molecular and biochemical characterization of the natural chromosome-encoded class A beta-lactamase from Pseudomonas luteola
Read more22 Oct 2009
publication
Serological reactivity and bacterial genotypes in Chlamydia trachomatis urogenital infections in Guadeloupe, French West Indies
Read more17 Oct 2009
01 Oct 2009
09 Mar 2009
publication
Chromosomal integration of the extended-spectrum beta-lactamase gene blaCTX-M-15 in Salmonella enterica serotype Concord isolates from internationally adopted children
Read more09 Mar 2009
publication
Novel plasmid-encoded ceftazidime-hydrolyzing CTX-M-53 extended-spectrum beta-lactamase from Salmonella enterica serotypes Westhampton and Senftenberg
Read more11 Dec 2008
publication
Association of IS26-composite transposons and complex In4-type integrons generates novel multidrug resistance loci in Salmonella genomic island 1
Read more01 Aug 2008
publication
Novel insertion sequence- and transposon-mediated genetic rearrangements in genomic island SGI1 of Salmonella enterica serovar Kentucky
Read more01 Jun 2008
29 Aug 2007
publication
Clonal expansion and microevolution of quinolone-resistant Salmonella enterica serotype typhi in Vietnam from 1996 to 2004
Read more01 Jun 2007
publication
Clonal reconquest of antibiotic-susceptible Salmonella enterica serotype Typhi in Son La Province, Vietnam
Read more16 Feb 2007
15 May 2006
publication
Molecular epidemiology of multidrug-resistant Shigella dysenteriae type 1 causing dysentery outbreaks in Central African Republic, 2003-2004
Read more01 Mar 2006
publication
Multidrug resistance in Salmonella enterica serotype Typhimurium from humans in France (1993 to 2003)
Read more01 Dec 2005
publication
Variants of the Klebsiella pneumoniae OKP chromosomal beta-lactamase are divided into two main groups, OKP-A and OKP-B
Read more01 Aug 2005
publication
Six groups of the OXY beta-Lactamase evolved over millions of years in Klebsiella oxytoca
Read more01 Jul 2005
publication
Multiple-antibiotic resistance in Salmonella enterica serotype Paratyphi B isolates collected in France between 2000 and 2003 is due mainly to strains harboring Salmonella genomic islands 1, 1-B, and 1-C
Read more01 Mar 2005
publication
Nosocomial outbreak caused by Salmonella enterica serotype Livingstone producing CTX-M-27 extended-spectrum beta-lactamase in a neonatal unit in Sousse, Tunisia
Read more01 Dec 2004
publication
Emergence of extended-spectrum-beta-lactamase (CTX-M-9)-producing multiresistant strains of Salmonella enterica serotype Virchow in poultry and humans in France
Read more15 Sep 2004
publication
Characterization of extended-spectrum-beta-lactamase (CTX-M-15)-producing strains of Salmonella enterica isolated in France and Senegal
Read more01 Jul 2004
publication
Extended-spectrum-beta-lactamase (TEM-52)-producing strains of Salmonella enterica of various serotypes isolated in France
Read more01 Jun 2004
publication