Timeline

Agnès Thierry

Research Engineer

27 Mar 2024

publication

Chromosome-level genome assembly of the European green woodpecker Picus viridis.

21 Mar 2024

publication

Sister chromatid cohesion halts DNA loop expansion.

19 Mar 2024

publication

Absence of chromosome axis protein recruitment prevents meiotic recombination chromosome-wide in the budding yeast Lachancea kluyveri.

04 Jan 2024

publication

Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes.

26 Jul 2023

publication

Neuroinvasion and anosmia are independent phenomena upon infection with SARS-CoV-2 and its variants.

05 Oct 2022

publication

Depletion or cleavage of cohesin during anaphase differentially affects chromatin structure and segregation.

15 Sep 2022

publication

Chromosome-scale assemblies of Acanthamoeba castellanii genomes provide insights into Legionella pneumophila infection-related chromatin reorganization.

10 Aug 2022

publication

Karyotype engineering reveals spatio-temporal control of replication firing and gene contacts.

01 Nov 2021

publication

Cohesin regulates homology search during recombinational DNA repair.

22 Oct 2021

news

Back on: Science Outreach during the Departmental retreat in Pornichet 2021

18 Jun 2021

publication

Generation of gene-level resolution chromosome contact maps in bacteria and archaea.

26 Feb 2021

publication

MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut.

22 Dec 2020

publication

Euryarchaeal genomes are folded into SMC-dependent loops and domains, but lack transcription-mediated compartmentalization.

21 Jul 2020

software

Serpentine: a flexible 2D binning method for differential Hi-C analysis

01 Jun 2020

publication

Serpentine: a flexible 2D binning method for differential Hi-C analysis.

28 Jan 2020

publication

Regulation of Cohesin-Mediated Chromosome Folding by Eco1 and Other Partners

03 Oct 2019

publication

FACT mediates cohesin function on chromatin

20 Aug 2019

publication

MetaTOR: A Computational Pipeline to Recover High-Quality Metagenomic Bins From Mammalian Gut Proximity-Ligation (meta3C) Libraries

30 May 2019

publication

Condensin-Mediated Chromosome Folding and Internal Telomeres Drive Dicentric Severing by Cytokinesis

15 Oct 2018

publication

Tridimensional infiltration of DNA viruses into the host genome shows preferential contact with active chromatin.

18 Sep 2018

publication

Generation of a Metagenomics Proximity Ligation 3C Library of a Mammalian Gut Microbiota

16 Jul 2018

publication

Characterizing meiotic chromosomes’ structure and pairing using a designer sequence optimized for Hi-C

20 Jul 2017

publication

Cohesins and condensins orchestrate the 4D dynamics of yeast chromosomes during the cell cycle

10 Mar 2017

publication

3D organization of synthetic and scrambled chromosomes

03 May 2016

publication

Massive Amplification at an Unselected Locus Accompanies Complex Chromosomal Rearrangements in Yeast

18 Feb 2016

event

Symposium Bernard Dujon

11 May 2015

team

Spatial Regulation of Genomes

30 Jan 2015

publication

Macrotene chromosomes provide insights to a new mechanism of high-order gene amplification in eukaryotes

01 Jan 2014

publication

The complete genome of Blastobotrys (Arxula) adeninivorans LS3 – a yeast of biotechnological interest.

09 Sep 2012

publication

The yeast Fun30 and human SMARCAD1 chromatin remodellers promote DNA end resection

01 Feb 2012

publication

Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization

28 Nov 2009

publication

Megasatellites: a new class of large tandem repeats discovered in the pathogenic yeast Candida glabrata

01 Oct 2009

publication

Comparative genomics of protoploid Saccharomycetaceae.

06 Dec 2008

publication

Genomic polymorphism in the population of Candida glabrata: gene copy-number variation and chromosomal translocations

23 Sep 2008

publication

Megasatellites: a peculiar class of giant minisatellites in genes involved in cell adhesion and pathogenicity in Candida glabrata

01 Apr 2005

publication

Genetic network interactions among replication, repair and nuclear pore deficiencies in yeast

01 Jul 2004

publication

Genome evolution in yeasts

01 Jan 2004

publication

Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae.

16 Jan 2003

publication

The complete mitochondrial genome sequence of the pathogenic yeast Candida (Torulopsis) glabrata

01 Feb 2001

publication

Microsatellite typing as a new tool for identification of Saccharomyces cerevisiae strains

01 Nov 1999

publication

Trinucleotide repeats and other microsatellites in yeasts

26 Nov 1998

publication

‘Mass-murder’ of ORFs from three regions of chromosome XI from Saccharomyces cerevisiae

01 May 1998

publication

Physical mapping of chromosomes VII and XV of Saccharomyces cerevisiae at 3.5 kb average resolution to allow their complete sequencing

29 May 1997

publication

The nucleotide sequence of Saccharomyces cerevisiae chromosome VII

29 May 1997

publication

The nucleotide sequence of Saccharomyces cerevisiae chromosome XV

01 Feb 1995

publication

Construction of a complete genomic library of Saccharomyces cerevisiae and physical mapping of chromosome XI at 3.7 kb resolution

02 Jun 1994

publication

Complete DNA sequence of yeast chromosome XI

01 Jan 1994

publication

Construction of a cosmid contig and of an EcoRI restriction map of yeast chromosome X

11 Nov 1992

publication

Nested chromosomal fragmentation in yeast using the meganuclease I-Sce I: a new method for physical mapping of eukaryotic genomes

01 Nov 1992

publication

The sequence of a 9.3 kb segment located on the left arm of the yeast chromosome XI reveals five open reading frames including the CCE1 gene and putative products related to MYO2 and to the ribosomal protein L10

07 May 1992

publication

The complete DNA sequence of yeast chromosome III

01 Apr 1992

publication

Sequence of a segment of yeast chromosome XI identifies a new mitochondrial carrier, a new member of the G protein family, and a protein with the PAAKK motif of the H1 histones

11 Jan 1991

publication

Cleavage of yeast and bacteriophage T7 genomes at a single site using the rare cutter endonuclease I-Sce I

01 Nov 1990

publication

The complete sequence of the 8.2 kb segment left of MAT on chromosome III reveals five ORFs, including a gene for a yeast ribokinase

25 Mar 1990

publication

A little guide for advanced search:

Chromosome-level genome assembly of the European green woodpecker Picus viridis.

Sister chromatid cohesion halts DNA loop expansion.

Absence of chromosome axis protein recruitment prevents meiotic recombination chromosome-wide in the budding yeast Lachancea kluyveri.

Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes.

Neuroinvasion and anosmia are independent phenomena upon infection with SARS-CoV-2 and its variants.

Depletion or cleavage of cohesin during anaphase differentially affects chromatin structure and segregation.

Chromosome-scale assemblies of Acanthamoeba castellanii genomes provide insights into Legionella pneumophila infection-related chromatin reorganization.

Karyotype engineering reveals spatio-temporal control of replication firing and gene contacts.

Cohesin regulates homology search during recombinational DNA repair.

Back on: Science Outreach during the Departmental retreat in Pornichet 2021

Generation of gene-level resolution chromosome contact maps in bacteria and archaea.

MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut.

Euryarchaeal genomes are folded into SMC-dependent loops and domains, but lack transcription-mediated compartmentalization.

Serpentine: a flexible 2D binning method for differential Hi-C analysis

Serpentine: a flexible 2D binning method for differential Hi-C analysis.

Regulation of Cohesin-Mediated Chromosome Folding by Eco1 and Other Partners

FACT mediates cohesin function on chromatin

MetaTOR: A Computational Pipeline to Recover High-Quality Metagenomic Bins From Mammalian Gut Proximity-Ligation (meta3C) Libraries

Condensin-Mediated Chromosome Folding and Internal Telomeres Drive Dicentric Severing by Cytokinesis

Tridimensional infiltration of DNA viruses into the host genome shows preferential contact with active chromatin.

Generation of a Metagenomics Proximity Ligation 3C Library of a Mammalian Gut Microbiota

Characterizing meiotic chromosomes’ structure and pairing using a designer sequence optimized for Hi-C

Cohesins and condensins orchestrate the 4D dynamics of yeast chromosomes during the cell cycle

3D organization of synthetic and scrambled chromosomes

Massive Amplification at an Unselected Locus Accompanies Complex Chromosomal Rearrangements in Yeast

Symposium Bernard Dujon

Spatial Regulation of Genomes

Macrotene chromosomes provide insights to a new mechanism of high-order gene amplification in eukaryotes

The complete genome of Blastobotrys (Arxula) adeninivorans LS3 – a yeast of biotechnological interest.

The yeast Fun30 and human SMARCAD1 chromatin remodellers promote DNA end resection

Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization

Megasatellites: a new class of large tandem repeats discovered in the pathogenic yeast Candida glabrata

Comparative genomics of protoploid Saccharomycetaceae.

Genomic polymorphism in the population of Candida glabrata: gene copy-number variation and chromosomal translocations

Megasatellites: a peculiar class of giant minisatellites in genes involved in cell adhesion and pathogenicity in Candida glabrata

Genetic network interactions among replication, repair and nuclear pore deficiencies in yeast

Genome evolution in yeasts

Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae.

The complete mitochondrial genome sequence of the pathogenic yeast Candida (Torulopsis) glabrata

Microsatellite typing as a new tool for identification of Saccharomyces cerevisiae strains

Trinucleotide repeats and other microsatellites in yeasts

‘Mass-murder’ of ORFs from three regions of chromosome XI from Saccharomyces cerevisiae

Physical mapping of chromosomes VII and XV of Saccharomyces cerevisiae at 3.5 kb average resolution to allow their complete sequencing

The nucleotide sequence of Saccharomyces cerevisiae chromosome VII

The nucleotide sequence of Saccharomyces cerevisiae chromosome XV

Construction of a complete genomic library of Saccharomyces cerevisiae and physical mapping of chromosome XI at 3.7 kb resolution

Complete DNA sequence of yeast chromosome XI

Construction of a cosmid contig and of an EcoRI restriction map of yeast chromosome X

Nested chromosomal fragmentation in yeast using the meganuclease I-Sce I: a new method for physical mapping of eukaryotic genomes

The sequence of a 9.3 kb segment located on the left arm of the yeast chromosome XI reveals five open reading frames including the CCE1 gene and putative products related to MYO2 and to the ribosomal protein L10

The complete DNA sequence of yeast chromosome III

Sequence of a segment of yeast chromosome XI identifies a new mitochondrial carrier, a new member of the G protein family, and a protein with the PAAKK motif of the H1 histones

Cleavage of yeast and bacteriophage T7 genomes at a single site using the rare cutter endonuclease I-Sce I

The complete sequence of the 8.2 kb segment left of MAT on chromosome III reveals five ORFs, including a gene for a yeast ribokinase

Purification and characterization of the in vitro activity of I-Sce I, a novel and highly specific endonuclease encoded by a group I intron