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© Research
Publication : International journal of systematic and evolutionary microbiology

Citrobacter europaeus sp. nov., isolated from water and human faecal samples.

Team: Biodiversity and Epidemiology of Bacterial Pathogens
Team: Microbial Evolutionary Genomics
Team: Collection of the Institut Pasteur (CIP)
Member: Sylvain Brisse
Member: Dominique Clermont
Scientific Fields
Diseases
Organisms
Applications
Technique

Published in International journal of systematic and evolutionary microbiology - 01 Jan 2017

Ribeiro TG, Clermont D, Branquinho R, Machado E, Peixe L, Brisse S,

Link to Pubmed [PMID] – 27902229

Link to DOI – 10.1099/ijsem.0.001606

Int J Syst Evol Microbiol 2017 Jan; 67(1): 170-173

Strains 97/79T and A121, recovered respectively from human faeces and well water, were compared to currently known species of the genus Citrobacter using genotypic and phenotypic approaches. Multilocus sequence analysis based on housekeeping genes fusA, leuS, pyrG, rpoB and recN, showed that the two strains formed a distinct phylogenetic lineage within the genus Citrobacter. Average nucleotide identity (ANI) between strains 97/79T and A121 was 99.2 %, whereas ANI values of strain 97/79T with the type strains of closely related species of the genus Citrobacter, C. werkmanii, C. braakii, C. freundii, C. youngae and C. pasteurii, were all below 93.0 %. The ability to metabolize different compounds also discriminated strains 97/79T and A121 from other species of the genus Citrobacter. Based on these results, strains 97/79T and A121 represent a novel species of the genus Citrobacter, for which the name Citrobacter europaeus sp. nov. is proposed, with strain 97/79T (=CIP 106467T=DSM 103031T) as the type strain. The DNA G+C content of strain 97/79T is 52.0 %.