| PDB |
Crystal Structures |
Resolution (A) |
Year |
NON-VIRAL proteins
|
| Eukariotyc cell-cell fusion |
| 4OJC |
Wild-type full-length trimeric ectodomain of C. elegans fusion protein EFF-1 |
2.93 |
2014 |
| 4OJD |
C-ter truncated trimeric ectodomain of C. elegans fusion protein EFF-1 G260A/D321E/D322E mutant |
2.26 |
2014 |
| 4OJE |
C-ter truncated trimeric ectodomain of C. elegans fusion protein EFF-1 |
2.57 |
2014 |
VIRAL proteins
|
Flaviviridae family
|
| Pestiviruses |
| Bovine viral diarrhea virus |
| 4DVK |
Glycoprotein Erns from pestivirus BVDV-1 strain NCP-7 |
2.20 |
2012 |
| 4DVL |
Glycoprotein Erns from pestivirus BVDV-1 in complex with 2′-3′-cyclo-UMP |
2.75 |
2012 |
| 4DVN |
Glycoprotein Erns from pestivirus BVDV-1 in complex with 2′-UMP |
2.38 |
2012 |
| 4DW3 |
Glycoprotein Erns from pestivirus BVDV-1 in complex with 5′-CMP |
2.35 |
2012 |
| 4DW4 |
Glycoprotein Erns from pestivirus BVDV-1 in complex with 5′-UMP |
2.23 |
2012 |
| 4DW5 |
Glycoprotein Erns from pestivirus BVDV-1 in complex with a non-cleavable CpU dinucleotide |
2.21 |
2012 |
| 4DW7 |
Active-site mutant (H32K) Erns from pestivirus BVDV-1 in complex with a CpU dinucleotide |
3.07 |
2012 |
| 4DWA |
Active-site mutant (H32K) Erns from pestivirus BVDV-1 in complex with a CpUpC trinucleotide |
3.01 |
2012 |
| 4DWC |
Glycoprotein Erns from the pestivirus BVDV-1 in complex with Zn ions |
2.89 |
2012 |
| Flaviviruses |
| Dengue virus |
| 3UZV |
Domain III of the envelope protein E from DENV 2 with the variable domains of Mab 4E11 |
2.10 |
2012 |
| 3UZQ |
Domain III of the envelope protein E from DENV 1 with the variable domains of Mab 4E11 |
1.60 |
2012 |
| 3UZE |
Domain III of the envelope protein E from DENV 3 with the variable domains of Mab 4E11 |
2.04 |
2012 |
| 3UYP |
Domain III of the envelope protein E from DENV 4 with the variable domains of Mab 4E11 |
2.00 |
2012 |
| 3UC0 |
Domain I of the envelope protein E from DENV 4 with Fab of the chimpanzee monoclonal Ab 5H2 |
2.71 |
2011 |
| 3UAJ |
Envelope glycoprotein ectodomain E from DENV 4 with Fab of the chimpanzee monoclonal Ab 5H2 |
3.23 |
2011 |
| Tick-Borne Encephalitis Virus |
| 1URZ |
Post-fusion form of the envelope glycoprotein E from Tick-Borne Encephalitis virus |
2.70 |
2004 |
| 1SVB |
Pre-fusion form of the envelope glycoprotein E from Tick-Borne Encephalitis virus |
1.90 |
1996 |
| Hepaciviruses |
| Hepatitis C Virus |
| 4JZN |
Broadly neutralizing human anti-Hepatitis C virus glycoprotein E2 Fab fragment HC84-1 |
2.05 |
2013 |
| 4JZO |
Broadly neutralizing human anti-Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC84-27 |
2.22 |
2013 |
| 4JVP |
Broadly neutralizing anti-Hepatitis C virus (HCV) glycoprotein E2 alpaca nanobody D03 |
1.76 |
2013 |
| 3U6R |
Broadly neutralizing anti-Hepatitis C virus (HCV) glycoprotein E2 single chain FV fragment 1:7 |
2.67 |
2011 |
| 1GX5 |
Hepatitis C virus RNA polymerase in complex with ribonucleotides |
1.70 |
2002 |
| 1CSJ |
RNA-dependent RNA polymerase of Hepatitis C virus |
2.80 |
1999 |
Togaviridade family
|
| Alphaviruses |
| Chikungunya virus |
| 3N40 |
Immature envelope glycoproteins p62-E1 of Chikungunya virus |
2.17 |
2010 |
| 3N41 |
Mature envelope glycoproteins complex (spontaneous cleavage) of Chikungunya virus |
3.01 |
2010 |
| 3N42 |
Mature envelope glycoproteins complex (furin cleavage) of Chikungunya virus |
3.00 |
2010 |
| 3N43 |
Mature envelope glycoproteins complex (trypsin cleavage) of Chikungunya virus |
2.58 |
2010 |
| 3N44 |
Mature envelope glycoproteins complex (trypsin cleavage; osmium soak) of Chikungunya virus |
2.35 |
2010 |
| 2XFB |
Fit of the Chikungunya E2-E1 envelope glycoproteins into Sindbis virus cryo-EM map |
9.00 |
2010 |
| 2XFC |
Fit of the Chikungunya E2-E1 envelope glycoproteins into Semliki Forest virus cryo-EM map |
9.00 |
2010 |
| Semliki Forest virus |
| 2V33 |
Domain III of E1 fusion glycoprotein from Semliki Forest virus |
1.55 |
2008 |
| 2ALA |
Semliki Forest virus envelope protein E1 in its monomeric conformation |
3.00 |
2006 |
| 1I9W |
Pre-fusion form of the envelope glycoprotein E1 from Semliki Forest virus |
3.00 |
2004 |
| 1RER |
Post-fusion form of the envelope glycoprotein E1 from Semliki Forest virus |
3.20 |
2004 |
| Rubiviridae |
| Rubella virus |
| 4ADI |
Post-fusion form of the envelope fusion protein E1 from Rubella virus (Na+) |
1.78 |
2013 |
| 4ADG |
Post-fusion form of the envelope fusion protein E1 from Rubella virus (Ca+, soak Gal3S) |
2.18 |
2013 |
| 4ADJ |
Post-fusion form of the envelope fusion protein E1 from Rubella virus (Ca+ 1mM) |
1.94 |
2013 |
| 4B3V |
Post-fusion form of the envelope fusion protein E1 from Rubella virus (Ca+, 20mM) |
1.98 |
2013 |
Retroviridae family
|
| Human immunodeficiency virus (HIV-1) |
| 2XT1 |
HIV-1 capsid protein C-terminal domain (146-231) in complex with a camelid VHH |
1.32 |
2011 |
| 2XV6 |
HIV-1 capsid protein C-terminal domain (146-220) in complex with a camelid VHH |
1.90 |
2011 |
| 2XXC |
Camelid VHH raised against the HIV-1 capsid protein C-terminal domain |
1.67 |
2011 |
| 2XXM |
HIV-1 capsid C-terminal domain in complex with a Camelid VHH and the CAI peptide |
1.65 |
2011 |
| 3DPH |
HIV-1 capsid C-terminal domain mutant (L211S) |
2.01 |
2008 |
| 3DS0 |
HIV-1 capsid C-terminal domain mutant (N183A) in complex with an inhibitor of particle assembly |
1.60 |
2008 |
| 3DS1 |
HIV-1 capsid C-terminal domain mutant (E187A) in complex with an inhibitor of particle assembly |
1.60 |
2008 |
| 3DS2 |
HIV-1 capsid C-terminal domain mutant (Y169A) |
1.20 |
2008 |
| 3DS3 |
HIV-1 capsid C-terminal domain mutant (Y169A) in complex with an inhibitor of particle assembly |
2.70 |
2008 |
| 3DS4 |
HIV-1 capsid C-terminal domain mutant (L211S) in complex with an Inhibitor of particle assembly |
1.12 |
2008 |
| 3DS5 |
HIV-1 capsid C-terminal domain mutant (N183A) |
2.40 |
2008 |
| 3DTJ |
HIV-1 capsid C-terminal domain mutant (E187A) |
4.00 |
2008 |
| 2BUO |
HIV-1 capsid C-terminal domain in complex with an inhibitor of particle assembly |
1.70 |
2005 |
| Endogenous retrovirus |
| 1Y4M |
Human endogenous retrovirus HERV-FRD envelope protein (syncitin-2) |
1.60 |
2005 |
Arenaviridae family (arenavirus)
|
| Lymphocytic Choriomeningitis virus |
| 3MKO |
Lymphocytic Choriomeningitis virus membrane fusion glycoprotein GP2 in post-fusion form |
1.80 |
2011 |
| Herpesviridae family |
| Pseudorabies virus |
| 2XQY |
Pseudorabies core fragment of glycoprotein H in complex with Fab D6.3 |
2.05 |
2010 |
Paramyxoviridae family
|
| Respiratory Syncitial Virus |
| 2WJ8 |
Respiratory Syncitial virus nucleocapsid-RNA decameric rings |
3.29 |
2009 |
Rhabdoviridae family
|
| Vesicular Stomatitis Virus |
| 2J6J |
Pre-fusion form of the Vesicular Stomatitis virus glycoprotein G ectodomain |
3.00 |
2007 |
| 2CMZ |
VSV-Indiana glycoprotein in its acidic conformation |
2.40 |
2006 |
| Coronaviridae family |
| Coronavirus |
| 1WYY |
Post-fusion hairpin conformation of the SARS Coronavirus spike glycoprotein |
2.20 |
2005 |
|
Other viruses |
|
|
Dicistroviridae family
|
| 3NAP |
Triatoma virus (TrV) |
2.50 |
2010 |
Picornaviridae family
|
| 2VF1 |
Capsid of the Picobirnavirus |
3.40 |
2005 |
Birnaviridae family
|
| 3IDE |
Aquabirnavirus (IPNV) subviral particle |
3.35 |
2009 |
| 1WCD |
Birnavirus IBDV T1 virus-like particle |
3.00 |
2005 |
| 1WCE |
Birnavirus IBDV T13 viral particle |
7.00 |
2005 |
Reoviridae family
|
| 1QHD |
Major capsid protein VP6 of group A rotavirus |
1.95 |
2001 |
Non-viral structures
|
| 4ACQ |
Alpha-2 macroglobulin |
4.20 |
2012 |
| 2J6E |
Autoimmune complex between a human IGM rheumatoid factor and IGG1 Fc |
3.00 |
2007 |
