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© Research
Event

2nd Edition of the Workshop Recent computational advances in metagenomics (RCAM’15)

Scientific Fields
Diseases
Organisms
Applications
Technique
Date
06
Oct 2015
Time
12:15:03
Institut Pasteur, Rue du Docteur Roux, Paris, France
Address
2015-10-06 12:15:03 2015-10-06 Europe/Paris 2nd Edition of the Workshop Recent computational advances in metagenomics (RCAM’15) This workshop aims at promoting discussions and collaborations between biologists (modelers),  computer scientists and applied-mathematicians involved in metagenomics and/or metatranscriptomics studies, either in the bioinformatics or statistical aspects of such analysis. CONFIRMED SPEAKERS——————Christopher Quince, […] Institut Pasteur, Rue du Docteur Roux, Paris, France Eduardo Rocha eduardo.rocha@pasteur.fr

About

This workshop aims at promoting discussions and collaborations between biologists (modelers),  computer scientists and applied-mathematicians involved in metagenomics and/or metatranscriptomics studies, either in the bioinformatics or statistical aspects of such analysis.

CONFIRMED SPEAKERS
——————
Christopher Quince, University of Glasgow
Alex L. Mitchell, EBI
Martin Lindner, Robert Koch Institute and 4-Antibody

OBJECTIVES
———-

Metagenomics  studies  refer   to  analyses  based  on high-throughput sequencing  of environmental samples  and microbial ecosystems. Both marker-gene (16S, 18S, ITS,  …)  and whole-genome strategies will be adressed to  cover a wide  array of question ranging  from quantifying the  microbial  diversity in  order  to  find  structuring factors to assessing the functional role of microbial communities.

The workshop will provide  an overview of the state-of-the-art methods currently used in metaomics including comparative metagenomics and metatranscriptomics.  At the  other end  of the  spectrum, case-studies will  illustrate  how  these  methods  produce  insightful biological knowledge.

SCOPE
—–
The program of this workshop will consist mainly of presentations of refereed papers (30 minutes) and  invited talks (50 minutes). Contributions are welcomed on all aspects  about bioinformatics and statistical analyses of metaomics datasets, including, but not limited to:
* new methods, tools or pipelines involved in the characterisation of microbial diversity,
* original methods for taxonomical assignment,
* data reduction,
* comparative metaomics,
* models for community assembly,
* challenges for tackling the complexity of metaomics datasets.

SUBMISSION
———-
Please send the abstract to rcam@jouy.inra.fr

All submitted abstracts will be peer-reviewed by the program committee. Submitted abstracts should not exceed 2 pages including bibliography.

Abstracts must be written and presented in English. They may describe work that has already been published or that is simultaneously submitted  to  a  journal,   conference,  or  workshop with refereed proceedings.

REGISTRATION
—————
The worskhop is free of registration fees but registration still mandatory through the registration form (to come) available at
http://maiage.jouy.inra.fr/?q=fr/rcam2015
Registration will close on October 1st.

IMPORTANT DATES
—————————–
Submission Deadline (abstract): September 6th 2015
Notification: September 14th 2015
Registration deadline : October 1st 2015
Workshop Date: October 6th  2015

ORGANIZERS
———-
Anne-Laure Abraham, INRA/MICALIS, Jouy-en-Josas, France
Valentin Loux, INRA/MaIAGE, Jouy-en-Josas, France
Mahendra Mariadassou, INRA/MaIAGE, Jouy-en-Josas, France
Eduardo Rocha, Institut Pasteur, Paris, France
Sophie Schbath, INRA/MaIAGE, Jouy-en-Josas, France

SPONSOR
——————
The workshop is supported by the metaprogramme “Metaomics of Microbial Ecosystems (M2E)” from the French National Institute for Agricultural Research (INRA) and the Institut Pasteur.

Location

Address: Institut Pasteur, Rue du Docteur Roux, Paris, France