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2023decOM: similarity-based microbial source tracking of ancient oral samples using k-mer-based methods., Microbiome 2023 Nov; 11(1): 243.
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2021[Ancient Yersinia pestis genomes for tracing the origins and spreading of plague past epidemics]., Med Sci (Paris) ; 32(8-9): 681-3.
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2021Viral metagenomics reveals the presence of novel Zika virus variants in Aedes mosquitoes from Barbados., Parasit Vectors 2021 Jun; 14(1): 343.
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2021A global metagenomic map of urban microbiomes and antimicrobial resistance., Cell 2021 Jun; 184(13): 3376-3393.e17.
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2020Highly Sensitive Virome Characterization of Aedes aegypti and Culex pipiens Complex from Central Europe and the Caribbean Reveals Potential for Interspecies Viral Transmission., Pathogens 2020 Aug; 9(9): .
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2019Emergence and Spread of Basal Lineages of Yersinia pestis during the Neolithic Decline., Cell 2019 01; 176(1-2): 295-305.e10.
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2018Plant, fungal, bacterial, and nitrogen interactions in the litter layer of a native Patagonian forest., PeerJ 2018 ; 6(): e4754.
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2017Genome analysis of the thermoacidophilic archaeon Acidianus copahuensis focusing on the metabolisms associated to biomining activities., BMC Genomics 2017 06; 18(1): 445.
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2016Exploring divergent antibiotic resistance genes in ancient metagenomes and discovery of a novel beta-lactamase family., Environ Microbiol Rep 2016 Oct; 8(5): 886-895.
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2016Metagenomics and the Human Virome in Asymptomatic Individuals., Annu Rev Microbiol 2016 09; 70(): 125-41.
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