Ligne de temps

Frédéric LEMOINE
Ingénieur(e) de Recherche
01 sept. 2024
publication

BioFlow-Insight: facilitating reuse of Nextflow workflows with structure reconstruction and visualization.

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08 juil. 2024
software

Bboot: Bayesian phylogenetic bootstrap

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21 mars 2024
software

ConDor: Detection of Convergent Mutations in Large Protein Alignments

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13 mars 2024
publication

Distinct evolution of SARS-CoV-2 Omicron XBB and BA.2.86/JN.1 lineages combining increased fitness and antibody evasion.

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07 mars 2024
publication

Accurate Detection of Convergent Mutations in Large Protein Alignments with ConDor.

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03 janv. 2024
publication

Integron cassettes integrate into bacterial genomes via widespread non-classical attG sites.

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01 sept. 2023
publication

BioConvert: a comprehensive format converter for life sciences.

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10 août 2023
publication

Robustness of Felsenstein’s Versus Transfer Bootstrap Supports With Respect to Taxon Sampling.

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17 juil. 2023
course

Bioinformatics program for PhD students 2023 2024

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30 juin 2023
publication

Reprohackathons: promoting reproducibility in bioinformatics through training.

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24 mai 2023
publication

APOBEC3F is a mutational driver of the human Monkeypox virus identified in the 2022 outbreak.

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21 avr. 2023
publication

Enhanced neutralization escape to therapeutic monoclonal antibodies by SARS-CoV-2 omicron sub-lineages.

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24 janv. 2023
publication

In-Depth Characterization of Full-Length Archived Viral Genomes after Nine Years of Posttreatment HIV Control.

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01 janv. 2023
publication

Developing and reusing bioinformatics data analysis pipelines using scientific workflow systems.

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28 nov. 2022
publication

Deciphering RNA G-quadruplex function during the early steps of HIV-1 infection.

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11 juil. 2022
course

Bioinformatics program for PhD students 2022-2023

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06 juil. 2022
publication

Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks.

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01 févr. 2022
publication

Considerable escape of SARS-CoV-2 Omicron to antibody neutralization.

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30 nov. 2021
course

Introduction à la Phylogénie Moléculaire : Concepts, méthodes et interprétation

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01 sept. 2021
publication

Gotree/Goalign: toolkit and Go API to facilitate the development of phylogenetic workflows.

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24 août 2021
course

Analyse de données reproductible

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01 juin 2021
publication

Maternal and neonatal outcomes related to Zika virus in pregnant women in Southern Vietnam: An epidemiological and virological prospective analysis.

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24 nov. 2020
publication

Origin, evolution and global spread of SARS-CoV-2

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12 oct. 2020
publication

COVID-Align: Accurate online alignment of hCoV-19 genomes using a profile HMM.

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24 sept. 2020
course

Bioinformatics program for PhD students 2020-2021

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03 juin 2020
software

COVID-Align

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01 juin 2020
publication

Genomic Epidemiology of 2015-2016 Zika Virus Outbreak in Cape Verde.

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26 mars 2020
project

The dynamics of HIV-1 epidemics in Cuba (Campus France)

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12 mars 2020
course

Introduction to Molecular Phylogenetics – ENS Paris

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12 mars 2020
event

MCEB 2020

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09 nov. 2019
course

Mathematical and Computational methods for Phylogenetics and Evolutionary Epidemiology – Havana 2019

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09 nov. 2019
course

Introduction à la Phylogénie Moléculaire : Concepts, méthodes et interprétation

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16 oct. 2019
publication

SpliceLauncher: a tool for detection, annotation and relative quantification of alternative junctions from RNAseq data

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12 sept. 2019
course

Introduction à l’analyse Bio-informatique de séquences

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02 juil. 2019
publication

NGPhylogeny.fr: new generation phylogenetic services for non-specialists

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04 juin 2019
event

MCEB 2019

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04 juin 2019
course

Introduction à la phylogénie moléculaire

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29 avr. 2019
publication

Distribution and asymptotic behavior of the phylogenetic transfer distance.

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05 sept. 2018
course

Analyse de séquences

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19 juil. 2018
course

Morning session – Introduction to NGS data analysis

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19 juil. 2018
software

Goalign/Gotree

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19 juil. 2018
software

NGPhylogeny.fr

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19 juil. 2018
software

Booster

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19 juil. 2018
project

Bioconvert

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26 juin 2018
course

C3BI Course: Introduction to Molecular Phylogenetics – Hong Kong 2018

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15 juin 2018
project

Renewing Felsenstein’s phylogenetic bootstrap.

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18 avr. 2018
publication

Renewing Felsenstein’s phylogenetic bootstrap in the era of big data

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11 avr. 2018
event

MCEB 2018

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08 févr. 2018
publication

Identification of novel recurrent ETV6-IGH fusions in primary central nervous system lymphoma

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23 oct. 2017
course

INTRODUCTION À LA PHYLOGÉNIE MOLÉCULAIRE : CONCEPTS, METHODES ET OUTILS

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26 juil. 2017
publication

Detecting splicing patterns in genes involved in hereditary breast and ovarian cancer

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10 mai 2017
event

MCEB 2017

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16 janv. 2017
publication

Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities

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21 déc. 2016
publication

Targeted Intron Retention and Excision for Rapid Gene Regulation in Response to Neuronal Activity

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14 oct. 2016
project

Virogenesis

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14 oct. 2016
project

NGPhylogeny.fr

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11 sept. 2015
publication

Molecular analyses of juvenile granulosa cell tumors bearing AKT1 mutations provide insights into tumor biology and therapeutic leads

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27 juil. 2015
nrc

Virus des infections respiratoires (dont la grippe et le SARS-CoV-2)

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26 juin 2015
team

Hub de Bioinformatique et Biostatistique

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06 nov. 2014
publication

Amplicon rearrangements during the extrachromosomal and intrachromosomal amplification process in a glioma

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17 déc. 2013
publication

Valproic acid causes proteasomal degradation of DICER and influences miRNA expression

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12 janv. 2013
publication

Gene- and exon-expression profiling reveals an extensive LPS-induced response in immune cells in patients with cirrhosis

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03 oct. 2012
publication

Birth and expression evolution of mammalian microRNA genes

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05 juil. 2012
publication

Lipocalin 2, the TNF-like receptor TWEAKR and its ligand TWEAK act downstream of NFAT1 to regulate breast cancer cell invasion

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01 mars 2010
publication

Concordance among digital gene expression, microarrays, and qPCR when measuring differential expression of microRNAs

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16 déc. 2008
publication

SynteBase/SynteView: a tool to visualize gene order conservation in prokaryotic genomes

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01 juil. 2008
publication

GenoQuery: a new querying module for functional annotation in a genomic warehouse

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29 nov. 2007
publication

Assessing the evolutionary rate of positional orthologous genes in prokaryotes using synteny data

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22 sept. 2007
publication

The multiple facets of homology and their use in comparative genomics to study the evolution of genes, genomes, and species

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