Timeline
Frédéric Lemoine
Research Engineer
29 May 2025
01 Apr 2025
project
Proposed approach to evaluate the potential of avian influenza viruses of concern to undergo genetic reassortment and acquire an MxA-resistant NP segment
Read more01 Mar 2025
publication
Genotypic and phenotypic characterisation of respiratory syncytial virus after nirsevimab breakthrough infections: a large, multicentre, observational, real-world study.
Read more20 Feb 2025
30 Jan 2025
publication
Antibody-secreting cell repertoires hold high-affinity anti-rocuronium specificities that can induce anaphylaxis in vivo.
Read more01 Nov 2024
publication
The Bayesian Phylogenetic Bootstrap and its Application to Short Trees and Branches.
Read more01 Sep 2024
publication
BioFlow-Insight: facilitating reuse of Nextflow workflows with structure reconstruction and visualization.
Read more08 Jul 2024
30 Jun 2024
21 Mar 2024
13 Mar 2024
publication
Distinct evolution of SARS-CoV-2 Omicron XBB and BA.2.86/JN.1 lineages combining increased fitness and antibody evasion.
Read more07 Mar 2024
publication
Accurate Detection of Convergent Mutations in Large Protein Alignments with ConDor.
Read more09 Feb 2024
publication
Distinct evolution of SARS-CoV-2 Omicron XBB and BA.2.86/JN.1 lineages combining increased fitness and antibody evasion.
Read more03 Jan 2024
publication
Integron cassettes integrate into bacterial genomes via widespread non-classical attG sites.
Read more01 Jan 2024
publication
Escape of SARS-CoV-2 Variants KP.1.1, LB.1, and KP3.3 From Approved Monoclonal Antibodies.
Read more30 Sep 2023
01 Sep 2023
10 Aug 2023
publication
Robustness of Felsenstein’s Versus Transfer Bootstrap Supports With Respect to Taxon Sampling.
Read more17 Jul 2023
30 Jun 2023
publication
Reprohackathons: promoting reproducibility in bioinformatics through training.
Read more24 May 2023
publication
APOBEC3F is a mutational driver of the human Monkeypox virus identified in the 2022 outbreak.
Read more21 Apr 2023
publication
Enhanced neutralization escape to therapeutic monoclonal antibodies by SARS-CoV-2 omicron sub-lineages.
Read more24 Jan 2023
publication
In-Depth Characterization of Full-Length Archived Viral Genomes after Nine Years of Posttreatment HIV Control.
Read more01 Jan 2023
publication
Developing and reusing bioinformatics data analysis pipelines using scientific workflow systems.
Read more11 Jul 2022
06 Jul 2022
publication
Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks.
Read more31 Mar 2022
01 Feb 2022
30 Nov 2021
01 Sep 2021
publication
Gotree/Goalign: toolkit and Go API to facilitate the development of phylogenetic workflows.
Read more24 Aug 2021
01 Jun 2021
publication
Maternal and neonatal outcomes related to Zika virus in pregnant women in Southern Vietnam: An epidemiological and virological prospective analysis.
Read more24 Nov 2020
12 Oct 2020
publication
COVID-Align: Accurate online alignment of hCoV-19 genomes using a profile HMM.
Read more24 Sep 2020
03 Jun 2020
01 Jun 2020
26 Mar 2020
12 Mar 2020
12 Mar 2020
09 Nov 2019
course
Mathematical and Computational methods for Phylogenetics and Evolutionary Epidemiology – Havana 2019
Read more09 Nov 2019
16 Oct 2019
publication
SpliceLauncher: a tool for detection, annotation and relative quantification of alternative junctions from RNAseq data
Read more12 Sep 2019
02 Jul 2019
04 Jun 2019
04 Jun 2019
29 Apr 2019
05 Sep 2018
19 Jul 2018
19 Jul 2018
19 Jul 2018
19 Jul 2018
19 Jul 2018
26 Jun 2018
15 Jun 2018
18 Apr 2018
11 Apr 2018
08 Feb 2018
publication
Identification of novel recurrent ETV6-IGH fusions in primary central nervous system lymphoma
Read more23 Oct 2017
26 Jul 2017
publication
Detecting splicing patterns in genes involved in hereditary breast and ovarian cancer
Read more10 May 2017
16 Jan 2017
publication
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities
Read more21 Dec 2016
publication
Targeted Intron Retention and Excision for Rapid Gene Regulation in Response to Neuronal Activity
Read more14 Oct 2016
14 Oct 2016
11 Sep 2015
publication
Molecular analyses of juvenile granulosa cell tumors bearing AKT1 mutations provide insights into tumor biology and therapeutic leads
Read more27 Jul 2015
26 Jun 2015
06 Nov 2014
publication
Amplicon rearrangements during the extrachromosomal and intrachromosomal amplification process in a glioma
Read more17 Dec 2013
publication
Valproic acid causes proteasomal degradation of DICER and influences miRNA expression
Read more12 Jan 2013
publication
Gene- and exon-expression profiling reveals an extensive LPS-induced response in immune cells in patients with cirrhosis
Read more03 Oct 2012
05 Jul 2012
publication
Lipocalin 2, the TNF-like receptor TWEAKR and its ligand TWEAK act downstream of NFAT1 to regulate breast cancer cell invasion
Read more01 Mar 2010
publication
Concordance among digital gene expression, microarrays, and qPCR when measuring differential expression of microRNAs
Read more16 Dec 2008
publication
SynteBase/SynteView: a tool to visualize gene order conservation in prokaryotic genomes
Read more01 Jul 2008
publication
GenoQuery: a new querying module for functional annotation in a genomic warehouse
Read more29 Nov 2007
publication
Assessing the evolutionary rate of positional orthologous genes in prokaryotes using synteny data
Read more22 Sep 2007
publication