Timeline

Christian Weber
Research Engineer
06 Jul 2024
publication

A point cloud segmentation framework for image-based spatial transcriptomics.

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30 Jun 2023
tool

smiFISH : a cheap and versatile smFISH approach

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30 Jun 2023
project

autoFISH : a modular toolbox for sequential FISH experiments

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27 Jun 2023
team

Quantitative RNA imaging

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28 Apr 2023
publication

An interactive murine single-cell atlas of the lung responses to radiation injury.

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01 Apr 2022
publication

Sensitive visualization of SARS-CoV-2 RNA with CoronaFISH.

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08 Feb 2022
publication

RNA Sequencing Reveals Widespread Transcription of Natural Antisense RNAs in Entamoeba Species

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11 May 2021
publication

Super-resolution visualization and modeling of human chromosomal regions reveals cohesin-dependent loop structures.

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08 Jan 2021
project

Understanding the Pathogenicity of Entamoeba Using Comparative Transcriptomics and Phylogenomics – GENAMIBE. Project-ANR-10-GENM-0011

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19 Nov 2020
publication

Genomic determinants for initiation and length of natural antisense transcripts in Entamoeba histolytica.

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09 Apr 2018
publication

Targeting the polyadenylation factor EhCFIm25 with RNA aptamers controls survival in Entamoeba histolytica

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17 Aug 2017
team

Photonic BioImaging (UTechS PBI)

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21 Oct 2016
publication

Extensive transcriptome analysis correlates the plasticity of Entamoeba histolytica pathogenesis to rapid phenotype changes depending on the environment

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05 Sep 2016
publication

smiFISH and FISH-quant – a flexible single RNA detection approach with super-resolution capability

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21 Jan 2016
publication

Multinucleation and Polykaryon Formation is Promoted by the EhPC4 Transcription Factor in Entamoeba histolytica

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02 Jul 2014
publication

Proteomic analysis identifies endoribouclease EhL-PSP and EhRRP41 exosome protein as novel interactors of EhCAF1 deadenylase

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09 Jan 2014
publication

Bioassay-guided fractionation of extracts from Codiaeum variegatum against Entamoeba histolytica discovers compounds that modify expression of ceramide biosynthesis related genes

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19 Dec 2013
publication

Identification of the virulence landscape essential for Entamoeba histolytica invasion of the human colon

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01 Feb 2013
publication

Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica

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22 Oct 2012
publication

Identification of dihydropyrimidine dehydrogenase as a virulence factor essential for the survival of Entamoeba histolytica in glucose-poor environments

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24 Sep 2012
publication

mRNA decay proteins are targeted to poly(A)+ RNA and dsRNA-containing cytoplasmic foci that resemble P-bodies in Entamoeba histolytica

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24 Feb 2012
publication

Endoplasmic reticulum stress-sensing mechanism is activated in Entamoeba histolytica upon treatment with nitric oxide

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05 Apr 2011
publication

A proteomic and cellular analysis of uropods in the pathogen Entamoeba histolytica

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23 Dec 2009
publication

Use of bacterially expressed dsRNA to downregulate Entamoeba histolytica gene expression

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08 Jul 2009
publication

DNA repair mechanisms in eukaryotes: Special focus in Entamoeba histolytica and related protozoan parasites

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24 Dec 2008
publication

Effects of DNA damage induced by UV irradiation on gene expression in the protozoan parasite Entamoeba histolytica

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09 Aug 2008
publication

Putative DEAD and DExH-box RNA helicases families in Entamoeba histolytica

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16 Apr 2008
publication

Chemotaxis of Entamoeba histolytica towards the pro-inflammatory cytokine TNF is based on PI3K signalling, cytoskeleton reorganization and the Galactose/N-acetylgalactosamine lectin activity

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12 Apr 2008
publication

In silico analysis of EST and genomic sequences allowed the prediction of cis-regulatory elements for Entamoeba histolytica mRNA polyadenylation

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13 Feb 2008
publication

Bioinformatics and functional analysis of an Entamoeba histolytica mannosyltransferase necessary for parasite complement resistance and hepatical infection

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17 Aug 2007
publication

The lysine- and glutamic acid-rich protein KERP1 plays a role in Entamoeba histolytica liver abscess pathogenesis

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01 Jan 2007
publication

Structure and content of the Entamoeba histolytica genome

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01 May 2006
publication

Stress by heat shock induces massive down regulation of genes and allows differential allelic expression of the Gal/GalNAc lectin in Entamoeba histolytica

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24 Feb 2005
publication

The genome of the protist parasite Entamoeba histolytica

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01 Nov 2004
publication

Double-stranded RNA mediates homology-dependent gene silencing of gamma-tubulin in the human parasite Entamoeba histolytica

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