Ligne de temps

Anna Zhukova
Chercheur(euse) Permanent(e)
05 nov. 2024
publication

Integrating contact tracing data to enhance outbreak phylodynamic inference: a deep learning approach.

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06 sept. 2024
project

Studying partner notification impact on pathogen epidemic control

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06 sept. 2024
software

bdpn

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06 sept. 2024
software

treesimulator

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05 sept. 2024
software

PyBDEI

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05 sept. 2024
software

PhyloDeep

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28 août 2024
publication

Recent evolutionary origin and localized diversity hotspots of mammalian coronaviruses.

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21 mars 2024
software

ConDor: Detection of Convergent Mutations in Large Protein Alignments

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07 mars 2024
publication

Accurate Detection of Convergent Mutations in Large Protein Alignments with ConDor.

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01 févr. 2024
publication

The multiplicity of thioredoxin systems meets the specific lifestyles of Clostridia.

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03 oct. 2023
team

Dynamiques évolutives des maladies infectieuses

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13 sept. 2023
publication

Fast and Accurate Maximum-Likelihood Estimation of Multi-Type Birth-Death Epidemiological Models from Phylogenetic Trees.

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17 juil. 2023
publication

Integrating full and partial genome sequences to decipher the global spread of canine rabies virus.

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25 mai 2023
publication

Modeling Drug Resistance Emergence and Transmission in HIV-1 in the UK.

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06 févr. 2023
team

Expertise group : PAGE – Protein And Gene Evolution

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06 juil. 2022
publication

Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks.

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07 mai 2022
publication

BioSimulators: a central registry of simulation engines and services for recommending specific tools.

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08 févr. 2022
event

DCB Seminar Series – Mary Dunlop – Cell-to-Cell Heterogeneity and Methods for Quantification and Control

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01 janv. 2022
publication

Genome-wide diversity of Zika virus: Exploring spatio-temporal dynamics to guide a new nomenclature proposal.

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22 déc. 2021
course

Phylogenetics, Molecular Epidemiology and Phylodynamics – Montevideo 2021

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30 nov. 2021
course

Introduction à la Phylogénie Moléculaire : Concepts, méthodes et interprétation

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07 oct. 2021
publication

A new SARS-CoV-2 variant poorly detected by RT-PCR on nasopharyngeal samples, with high lethality: an observational study.

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29 sept. 2021
course

Large phylogenies module (COVEME)

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29 sept. 2021
course

Molecular evolution and phylogenetics module (IBT 2021 H3ABioNet)

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28 sept. 2021
publication

Drug resistance mutations in HIV: new bioinformatics approaches and challenges.

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09 août 2021
publication

Cuban history of CRF19 recombinant subtype of HIV-1.

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09 juin 2021
publication

Phylogenetic analysis of HIV-1 shows frequent cross-country transmission and local population expansions

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01 juin 2021
publication

Maternal and neonatal outcomes related to Zika virus in pregnant women in Southern Vietnam: An epidemiological and virological prospective analysis.

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24 nov. 2020
publication

Origin, evolution and global spread of SARS-CoV-2

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22 oct. 2020
publication

The seventh pandemic of cholera in Europe revisited by microbial genomics.

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01 août 2020
publication

SBML Level 3: an extensible format for the exchange and reuse of biological models.

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30 juil. 2020
course

Molecular evolution and phylogenetics module (IBT 2020 H3ABioNet)

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15 mai 2020
course

minicourse Introduction to Phylogenetics – CentraleSupélec

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15 avr. 2020
publication

Efficiently Analysing Large Viral Data Sets in Computational Phylogenomics

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26 mars 2020
project

The dynamics of HIV-1 epidemics in Cuba (Campus France)

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12 mars 2020
project

Phylogeography

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12 mars 2020
course

Introduction to Molecular Phylogenetics – ENS Paris

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12 mars 2020
event

MCEB 2020

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09 nov. 2019
course

Behind Evolutionary Trees: Mathematics and Algorithms in Phylogenetics – Montevideo 2019

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09 nov. 2019
course

Mathematical and Computational methods for Phylogenetics and Evolutionary Epidemiology – Havana 2019

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09 nov. 2019
course

Introduction à la Phylogénie Moléculaire : Concepts, méthodes et interprétation

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01 sept. 2019
publication

A Fast Likelihood Method to Reconstruct and Visualize Ancestral Scenarios

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04 juin 2019
event

MCEB 2019

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04 juin 2019
course

Introduction à la phylogénie moléculaire

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19 juil. 2018
course

Scientific Programming in Python

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19 juil. 2018
course

Introduction to Python Programming

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19 juil. 2018
course

Introduction to data analysis

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19 juil. 2018
software

PastML

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19 juil. 2018
project

The phylodynamics of partner notification and contact tracing in HIV epidemics

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19 juil. 2018
project

Bioconvert

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26 juin 2018
course

C3BI Course: Introduction to Molecular Phylogenetics – Hong Kong 2018

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01 juin 2018
project

Ancestral Reconstruction

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11 avr. 2018
event

MCEB 2018

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23 oct. 2017
course

INTRODUCTION À LA PHYLOGÉNIE MOLÉCULAIRE : CONCEPTS, METHODES ET OUTILS

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06 oct. 2017
publication

The Role of Phylogenetics as a Tool to Predict the Spread of Resistance

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10 mai 2017
event

MCEB 2017

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19 janv. 2017
publication

Genome-Wide Transcriptional Start Site Mapping and sRNA Identification in the Pathogen Leptospira interrogans

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14 oct. 2016
project

HIV-1 Drug Resistance Mutation analysis

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14 oct. 2016
project

Virogenesis

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10 juin 2016
publication

Toward community standards and software for whole-cell modeling

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10 mai 2016
project

Systems biology of cell infection by the bacterial pathogen Listeria monocytogenes

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26 juin 2015
team

Hub de Bioinformatique et Biostatistique

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26 févr. 2015
publication

Mimoza: web-based semantic zooming and navigation in metabolic networks

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08 janv. 2015
publication

Pantograph: A template-based method for genome-scale metabolic model reconstruction

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25 avr. 2014
publication

Knowledge-based generalization of metabolic models

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06 mars 2014
publication

Knowledge-based generalization of metabolic networks: a practical study

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24 sept. 2012
publication

LibKiSAO: a Java library for Querying KiSAO

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25 oct. 2011
publication

Controlled vocabularies and semantics in systems biology

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03 mars 2010
publication

Modeling sample variables with an Experimental Factor Ontology

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