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Sebastian Duchene
Responsable de Structure
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Publications
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2025Pre-European contact leprosy in the Americas and its current persistence., Science 2025 May; (): eadu7144.
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2025Temporal and geographical lineage dynamics of invasive Streptococcus pyogenes in Australia from 2011 to 2023: a retrospective, multicentre, clinical and genomic epidemiology study., Lancet Microbe 2025 Apr; (): 101053.
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2025How does date-rounding affect phylodynamic inference for public health?, PLoS Comput Biol 2025 Apr; 21(4): e1012900.
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2024Assessing the effect of model specification and prior sensitivity on Bayesian tests of temporal signal, PLoS Computational Biology, 2024, 20 (11), pp.e1012371. ⟨10.1371/journal.pcbi.1012371⟩.
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2024Integrating contact tracing data to enhance outbreak phylodynamic inference: a deep learning approach., Mol Biol Evol 2024 Nov; (): .
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2024Rifaximin prophylaxis causes resistance to the last-resort antibiotic daptomycin., Nature 2024 Nov; 635(8040): 969-977.
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2024Recent evolutionary origin and localized diversity hotspots of mammalian coronaviruses., Elife 2024 Aug; 13(): .
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2024Clockor2: Inferring Global and Local Strict Molecular Clocks Using Root-to-Tip Regression, Systematic Biology, 2024, pp.syae003. ⟨10.1093/sysbio/syae003⟩.
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2023Tracing the origin of virulence, Sciences.
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2023Detecting Episodic Evolution through Bayesian Inference of Molecular Clock Models., Mol Biol Evol 2023 Oct; 40(10): .
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