Florian Muller - Softwares Archive - Research - Institut Pasteur

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program_project
nrc
whocc
project
software
tool
patent

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Administrative Staff
Assistant Professor
Associate Professor
Clinical Research Assistant
Clinical Research Nurse
Clinician Researcher
Department Manager
Dual-education Student
Full Professor
Honorary Professor
Lab assistant
Master Student
MD-PhD Student
Medical Staff
Non-permanent Researcher
Nursing Staff
Permanent Researcher
Pharmacist
PhD Student
Physician
Post-doc
Prize
Project Manager
Research Associate
Research Engineer
Retired scientist
Technician
Undergraduate Student
Veterinary
Visiting Scientist

Appointments

Deputy Director of Center
Deputy Director of Department
Deputy Director of National Reference Center
Deputy Head of Facility
Director of Center
Director of Department
Director of Institute
Director of National Reference Center
Group Leader
Head of Facility
Head of Operations
Head of Structure
Honorary President of the Departement
Labex Coordinator

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RNA2seg: a generalist model for cell segmentation in image-based spatial transcriptomics

Florian Muller

HiCExperiment

Jacques Serizay

A large set of colored circles, linked by gray segments.

OntoWeaver

Johann Dreo

LucaProt: a deep learning algorithm designed to identify RNA viral “dark matter” in global ecosystems.

Xin Hou

bdct – Birth-Death Contact-Tracing parameter estimator

Anna Zhukova

treesimulator – Transmission tree generator

Anna Zhukova • Alejandra de Selys Gómez

PyBDEI – Birth-Death Exposed-Infectious parameter estimator

Anna Zhukova

PhyloDeep

Bboot: Bayesian phylogenetic bootstrap

Frédéric Lemoine

DNABarcodeCompatibility bioconductor R-package

Raphaël Etournay

Zellige

Raphaël Etournay

Comseg – Cell segmentation for spatial transcriptomics data

Florian Muller

ConDor: Detection of Convergent Mutations in Large Protein Alignments

Frédéric Lemoine

OMIQ

FISH-quant v2: a scalable and modular tool for smFISH image analysis

Florian Muller

SatelliteFinder

Eduardo Rocha