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Prediction of the intestinal resistome by a three-dimensional structure-based method
© Research
Institut Pasteur

software [110]

Software

Accurate profiling of microbial communities for shotgun metagenomic sequencing with Meteor2

Amine Ghozlane
Software

Prediction of the intestinal resistome by a three-dimensional structure-based method

Amine Ghozlane
Software

RNA2seg: a generalist model for cell segmentation in image-based spatial transcriptomics

Florian Muller
Software

HiCExperiment

Jacques Serizay
A large set of colored circles, linked by gray segments.
Software

OntoWeaver

Johann Dreo
Software

LucaProt: a deep learning algorithm designed to identify RNA viral “dark matter” in global ecosystems.

Xin Hou
Software

bdct – Birth-Death Contact-Tracing parameter estimator

Anna Zhukova
Software

treesimulator – Transmission tree generator

Anna Zhukova • Alejandra de Selys Gómez
Software

PyBDEI – Birth-Death Exposed-Infectious parameter estimator

Anna Zhukova
Software

PhyloDeep

Software

Bboot: Bayesian phylogenetic bootstrap

Frédéric Lemoine
Software

DNABarcodeCompatibility bioconductor R-package

Raphaël Etournay
Software

Zellige

Raphaël Etournay
Software

Comseg – Cell segmentation for spatial transcriptomics data

Florian Muller
Software

ConDor: Detection of Convergent Mutations in Large Protein Alignments

Frédéric Lemoine
Software

OMIQ

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