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  • Clinician Researcher
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  • Research Engineer
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  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
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  • Director of Center
  • Director of Department
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Scientific Fields
Diseases
Organisms
Applications
Technique
Starting Date
06
Sep 2024
Keywords
4 Keywords
Status
Completed
Members
2
Structures
2
Publications
1

About

Treesimulator is a python package for simulation of pathogen transmission trees under a given Multitype Birth–Death (MTBD) model, with or without contact tracing (CT) and potentially piece-wise-constant parameter value changes (Skyline).

Name
treesimulator
Summary
Treesimulator is a python package for simulation of pathogen transmission trees under a given Multitype Birth–Death (MTBD) model, , with or without contact tracing (CT) and potentially piece-wise-constant parameter value changes (Skyline).
Homepage
https://github.com/evolbioinfo/treesimulator
Tool Type
python library
docker container
conda package
Topics
phylodynamics
epidemiology
Links
GitHubPyPIDockerHub
More information on Bio.tools