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© Research
Publication : Nucleic acids research

SubtiList: the reference database for the Bacillus subtilis genome

Scientific Fields
Diseases
Organisms
Applications
Technique

Published in Nucleic acids research - 01 Jan 2002

Moszer I, Jones LM, Moreira S, Fabry C, Danchin A

Link to Pubmed [PMID] – 11752255

Nucleic Acids Res. 2002 Jan;30(1):62-5

SubtiList is the reference database dedicated to the genome of Bacillus subtilis 168, the paradigm of Gram-positive endospore-forming bacteria. Developed in the framework of the B.subtilis genome project, SubtiList provides a curated dataset of DNA and protein sequences, combined with the relevant annotations and functional assignments. Information about gene functions and products is continuously updated by linking relevant bibliographic references. Recently, sequence corrections arising from both systematic verifications and submissions by individual scientists were included in the reference genome sequence. SubtiList is based on a generic relational data schema and a World Wide Web interface developed for the handling of bacterial genomes, called GenoList. The World Wide Web interface was designed to allow users to easily browse through genome data and retrieve information according to common biological queries. SubtiList also provides more elaborate tools, such as pattern searching, which are tightly connected to the overall browsing system. SubtiList is accessible at http://genolist.pasteur.fr/SubtiList/. Similar bacterial databases are accessible at http://genolist.pasteur.fr/.

http://www.ncbi.nlm.nih.gov/pubmed/11752255