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© Research
Publication : Epigenomics

Investigating the epi-miRNome: identification of epi-miRNAs using transfection experiments.

Scientific Fields
Diseases
Organisms
Applications
Technique

Published in Epigenomics - 01 Nov 2019

Reale E, Taverna D, Cantini L, Martignetti L, Osella M, De Pittà C, Virga F, Orso F, Caselle M,

Link to Pubmed [PMID] – 31693439

Link to DOI – 10.2217/epi-2019-0050

Epigenomics 2019 Nov; 11(14): 1581-1599

Aim: Growing evidence shows a strong interplay between post-transcriptional regulation, mediated by miRNAs (miRs) and epigenetic regulation. Nevertheless, the number of experimentally validated miRs (called epi-miRs) involved in these regulatory circuitries is still very small. Material & methods: We propose a pipeline to prioritize candidate epi-miRs and to identify potential epigenetic interactors of any given miR starting from miR transfection experiment datasets. Results & conclusion: We identified 34 candidate epi-miRs: 19 of them are known epi-miRs, while 15 are new. Moreover, using an in-house generated gene expression dataset, we experimentally proved that a component of the polycomb-repressive complex 2, the histone methyltransferase enhancer of zeste homolog 2 (EZH2), interacts with miR-214, a well-known prometastatic miR in melanoma and breast cancer, highlighting a miR-214-EZH2 regulatory axis potentially relevant in tumor progression.

https://pubmed.ncbi.nlm.nih.gov/31693439