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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Clinical Research Nurse
  • Clinician Researcher
  • Department Manager
  • Dual-education Student
  • Full Professor
  • Honorary Professor
  • Lab assistant
  • Master Student
  • Non-permanent Researcher
  • Nursing Staff
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Prize
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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© Research
Publication : Journal of Open Source Software

A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it.

Team: Expertise group : WINTER – Web integration
Member: Bryan Brancotte
Member: Hervé Menager
Scientific Fields
Diseases
Organisms
Applications
Technique

Published in Journal of Open Source Software - 22 Jul 2018

Bryan Brancotte, Christophe Blanchet, Hervé Ménager

JOSS 2018

The EDAM Browser is a client-side web-based visualization javascript widget for the navigation of the EDAM ontology. EDAM is a structured and controlled vocabulary describing bioinformatics and computational biology concepts. It is used to annotate resource descriptions (tools, web services) for discovery and integration in platforms such as galaxy. The EDAM Browser provides users a simple and performant interface to explore EDAM when annotating or searching for bioinformatics resources.