• 2021
  Peng Y, Zhang D, Chen T, Xia Y, Wu P, Seto WK, Kozyrskyj AL, Cowling BJ, Zhao J, Tun HM, , Gut microbiome and resistome changes during the first wave of the COVID-19 pandemic in comparison with pre-pandemic travel-related changes., J Travel Med 2021 10; 28(7): .
• 2021
  Orsso CE, Peng Y, Deehan EC, Tan Q, Field CJ, Madsen KL, Walter J, Prado CM, Tun HM, Haqq AM, , Composition and Functions of the Gut Microbiome in Pediatric Obesity: Relationships with Markers of Insulin Resistance., Microorganisms 2021 Jul; 9(7): .
• 2021
  Tun HM, Peng Y, Chen B, Konya TB, Morales-Lizcano NP, Chari R, Field CJ, Guttman DS, Becker AB, Mandhane PJ, Moraes TJ, Sears MR, Turvey SE, Subbarao P, Simons E, Scott JA, Kozyrskyj AL, , Ethnicity Associations With Food Sensitization Are Mediated by Gut Microbiota Development in the First Year of Life., Gastroenterology 2021 07; 161(1): 94-106.
• 2021
  Zhao H, Nickle DC, Zeng Z, Law PYT, Wilcox MH, Chen L, Peng Y, Meng J, Deng Z, Albright A, Zhong H, Xu X, Zhu S, Shen J, Blanchard RL, Dorr MB, Shaw PM, Li J, , Global Landscape of Clostridioides Difficile Phylogeography, Antibiotic Susceptibility, and Toxin Polymorphisms by Post-Hoc Whole-Genome Sequencing from the MODIFY I/II Studies., Infect Dis Ther 2021 Jun; 10(2): 853-870.
• 2021
  Chen T, Qin Y, Chen M, Zhang Y, Wang X, Dong T, Chen G, Sun X, Lu T, White RA, Ye P, Tun HM, Xia Y, , Gestational diabetes mellitus is associated with the neonatal gut microbiota and metabolome., BMC Med 2021 05; 19(1): 120.
• 2021
  Peng Y, Zhao J, Tun HM, , The New Foe and Old Friends: Are We Ready for Microbiota-Based Therapeutics in Treating COVID-19 Patients?, Gastroenterology 2021 05; 160(6): 2192-2193.
• 2021
  Peng Y, Liang S, Poonsuk K, On H, Li SW, Maurin MMP, Chan CH, Chan CL, Sin ZY, Tun HM, , Role of gut microbiota in travel-related acquisition of extended spectrum β-lactamase-producing Enterobacteriaceae., J Travel Med 2021 04; 28(3): .
• 2021
  Zhang D, Peng Y, Chan CL, On H, Wai HK, Shekhawat SS, Gupta AB, Varshney AK, Chuanchuen R, Zhou X, Xia Y, Liang S, Fukuda K, Medicherla KM, Tun HM, , Metagenomic Survey Reveals More Diverse and Abundant Antibiotic Resistance Genes in Municipal Wastewater Than Hospital Wastewater., Front Microbiol 2021 ; 12(): 712843.
• 2020
  Peng Y, Tan Q, Afhami S, Deehan EC, Liang S, Gantz M, Triador L, Madsen KL, Walter J, Tun HM, Haqq AM, , The Gut Microbiota Profile in Children with Prader-Willi Syndrome., Genes (Basel) 2020 08; 11(8): .
• 2019
  Song W, Sun HX, Zhang C, Cheng L, Peng Y, Deng Z, Wang D, Wang Y, Hu M, Liu W, Yang H, Shen Y, Li J, You L, Xiao M, , Prophage Hunter: an integrative hunting tool for active prophages., Nucleic Acids Res 2019 07; 47(W1): W74-W80.
• 2018
  Peng Y, Tang S, Wang D, Zhong H, Jia H, Cai X, Zhang Z, Xiao M, Yang H, Wang J, Kristiansen K, Xu X, Li J, , MetaPGN: a pipeline for construction and graphical visualization of annotated pangenome networks., Gigascience 2018 11; 7(11): .
• 2017
  Zhong H, Fang C, Fan Y, Lu Y, Wen B, Ren H, Hou G, Yang F, Xie H, Jie Z, Peng Y, Ye Z, Wu J, Zi J, Zhao G, Chen J, Bao X, Hu Y, Gao Y, Zhang J, Yang H, Wang J, Madsen L, Kristiansen K, Ni C, Li J, Liu S, , Lipidomic profiling reveals distinct differences in plasma lipid composition in healthy, prediabetic, and type 2 diabetic individuals., Gigascience 2017 07; 6(7): 1-12.