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Metagenomics for Pathogen Detection
Valérie Caro (PI)
Pathogen detection and characterization methods in public health infectious disease surveillance rely on the identification of agents that are already known to be associated with a particular clinical syndrome. Metagenomics, as an emerging field […]
2016Importance of mosquito “quasispecies” in selecting an epidemic arthropod-borne virus, Sci Rep 2016 07;6:29564.
2016Genome-wide mosaicism within Mycobacterium abscessus: evolutionary and epidemiological implications, BMC Genomics 2016 Feb;17:118.
2016Diagnosis of Helicobacter pylori recurrence: relapse or reinfection? Usefulness of molecular tools, Scand. J. Gastroenterol. 2016;51(6):672-8.
2016Mycobacterial pan-genome analysis suggests important role of plasmids in the radiation of type VII secretion systems, Genome Biology and Evolution.
2015Distinct lineages of Ebola virus in Guinea during the 2014 West African epidemic, Nature 2015 Aug;524(7563):102-4.
2015Rouxiella chamberiensis gen. nov., sp. nov., a member of the family Enterobacteriaceae isolated from parenteral nutrition bags, Int. J. Syst. Evol. Microbiol. 2015 Jun;65(Pt 6):1812-8.
2014Co-circulation of dengue virus type 3 genotypes in Vientiane capital, Lao PDR, PLoS ONE 2014;9(12):e115569.
2014Three-way interactions between mosquito population, viral strain and temperature underlying chikungunya virus transmission potential, Proc. Biol. Sci. 2014 Oct;281(1792).
2014Chikungunya virus adaptation to a mosquito vector correlates with only few point mutations in the viral envelope glycoprotein, Infect. Genet. Evol. 2014 Jun;24:116-26.
2014Population genetic structure and isolation by distance of Helicobacter pylori in Senegal and Madagascar, PLoS ONE 2014;9(1):e87355.
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