I am Camila Duitama González, a PostDoc in the Sequence Bioinformatics group from Institut Pasteur. I obtained my Ph.D. in the same lab, under the supervision of Dr. Rayan Chikhi and Dr. Hugues Richard. I am currently working in the decontamination of ancient metagenomic data using machine learning applied to k-mer profiles. My job is funded by the Paris AI Research Institute (PRAIRIE)
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2025MUSET: Set of utilities for constructing abundance unitig matrices from sequencing data., Bioinformatics 2025 Feb; (): .
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2023aKmerBroom: Ancient oral DNA decontamination using Bloom filters on k-mer sets., iScience 2023 Nov; 26(11): 108057.
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2023decOM: similarity-based microbial source tracking of ancient oral samples using k-mer-based methods., Microbiome 2023 Nov; 11(1): 243.