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  • team
  • department
  • center
  • program_project
  • nrc
  • whocc
  • project
  • software
  • tool
  • patent
  • Administrative Staff
  • Assistant Professor
  • Associate Professor
  • Clinical Research Assistant
  • Clinician Researcher
  • Department Manager
  • Full Professor
  • Graduate Student
  • Honorary Professor
  • Lab assistant
  • Non-permanent Researcher
  • Permanent Researcher
  • Pharmacist
  • PhD Student
  • Physician
  • Post-doc
  • Prize
  • Project Manager
  • Research Associate
  • Research Engineer
  • Retired scientist
  • Technician
  • Undergraduate Student
  • Veterinary
  • Visiting Scientist
  • Deputy Director of Center
  • Deputy Director of Department
  • Deputy Director of National Reference Center
  • Deputy Head of Facility
  • Director of Center
  • Director of Department
  • Director of Institute
  • Director of National Reference Center
  • Group Leader
  • Head of Facility
  • Head of Operations
  • Head of Structure
  • Honorary President of the Departement
  • Labex Coordinator
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© Research
Equipment

Image Processing Workstations for Electron Microscopy

Team: Ultrastructural BioImaging Core Facility
Scientific Fields
Diseases
Organisms
Applications
Technique

- • -

All workstations can be booked through the PPMS system.

Monet
Intel Core i9-7900X CPU@3.30GHz/ 128GB DDR4
2x GTX 1080 Ti
OS: CentOS Linux 7.7
Software: CUDA v9.1, CUDA v8.0, CUDA v7.5, UCSF Chimera v1.12, CTFFind v4.1.8, Imod v4.9.12, Gctf v.1.06, Relion3, EMAN v2.2, Amira v2019.2, Dynamo (standalone version), Ilastik v1.3.0

Manet (named after Edouard Manet)
Bi-processor Intel Xeon Nehalem 4c X5560 2.8GHz/ 80Go DDR3-1333
PNY NVIDIA GTX 1080 TI -11Go GDDR5X
 OS: CentOS Linux 7.7
Software: CUDA v8.0, Imod v4.9.12, Bsoft v1.7, ICON-GPU v1.2.6, PEET v1.11.1, UCSF Chimera, Amira v6.3, Ilastik v1.2.2, SuRVoS, Blender v2.66, Dynamo (standalone version), ICY,  FiJi, VMD v1.8.7

Baselitz (named after Georg Baselitz)
Equipped with Wacom PTK-640 pen tablet.
OS: Windows 7
Software: ICY, FiJi, Amira, Ilastik, UCSF Chimera, Blender (Neuromorph), IMOD, PEET

Crabe (named after James Crabe)
Wacom Cintiq 22HD pen display
Bi-processor Intel Haswell 10C E5-2660V3 2.6G 25M 9.6GT/s QPI / 128GB DDR4-2133 ECC
NVIDIA Quadro K2200 4GB GDRR5
OS: Windows 7
Software: SerialEM (dummy version), ICY, FiJi, Amira v6.5 (XImagePAQ + XMesh + XSkeleton Extensions), Ilastik, MIB, UCSF Chimera, Blender (NeuroMorph), Vaa3D, IMOD, PEET

Atlas (named after Atlas)
Hardware: Not much :)
OS: Windows 7
Software: ATLAS5, SerialEM, IMOD, ICY, Fiji