Timeline

Béatrice Regnault

Research Engineer

01 Dec 2023

publication

Performance of clinical metagenomics in France: a prospective observational study.

08 Sep 2023

publication

Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence.

22 Aug 2023

publication

Chronic Aichi Virus Infection As a Cause of Long-Lasting Multiorgan Involvement in Patients With Primary Immune Deficiencies.

24 May 2023

publication

Virus Pop—Expanding Viral Databases by Protein Sequence Simulation

05 Apr 2023

publication

SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19

03 Jan 2023

publication

Circovirus Hepatitis Infection in Heart-Lung Transplant Patient, France.

07 Oct 2022

software

Microseek: A Metagenomic Pipeline for Virus Diagnostic and Discovery

14 Sep 2022

publication

Fetal Zika virus infection diagnosed by metagenomic next-generation sequencing in amniotic fluid.

08 Sep 2022

publication

Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery.

14 Apr 2022

publication

Bat coronaviruses related to SARS-CoV-2 and infectious for human cells.

15 May 2021

publication

First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1.

11 Apr 2021

publication

The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health.

07 Feb 2021

publication

Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results

01 Jan 2021

publication

Transcriptome Profile During Rabies Virus Infection: Identification of Human CXCL16 as a Potential New Viral Target.

06 Jan 2020

team

Pathogen discovery

26 Dec 2017

publication

Colorectal cancer specific conditions promote gut colonization

06 May 2016

news

A bacteriocin from epidemic Listeria strains alters the host intestinal microbiota to favor infection (PNAS May 2nd, 2016)

18 Mar 2015

team

Biomics

01 Sep 2014

publication

Meta-analysis of SHANK Mutations in Autism Spectrum Disorders: a gradient of severity in cognitive impairments.

22 Oct 2013

publication

Comparative analysis of resistant and susceptible macrophage gene expression response to Leishmania major parasite

03 Oct 2013

publication

MicroRNA expression profile in human macrophages in response to Leishmania major infection

30 Apr 2013

publication

Epithelial cell proliferation arrest induced by lactate and acetate from Lactobacillus casei and Bifidobacterium breve

21 Aug 2012

publication

Transcriptomic signature of Leishmania infected mice macrophages: a metabolic point of view

09 Feb 2012

publication

Genetic and functional analyses of SHANK2 mutations suggest a multiple hit model of autism spectrum disorders.

29 Sep 2011

publication

Genome-wide analysis of heteroduplex DNA in mismatch repair-deficient yeast cells reveals novel properties of meiotic recombination pathways

20 Jan 2011

publication

A bacterial protein targets the BAHD1 chromatin complex to stimulate type III interferon response

02 Oct 2009

publication

Early over expression of messenger RNA for multiple genes, including insulin, in the Pancreatic Lymph Nodes of NOD mice is associated with Islet Autoimmunity

03 Aug 2009

publication

Human BAHD1 promotes heterochromatic gene silencing

18 Jun 2009

publication

The Listeria transcriptional landscape from saprophytism to virulence.

20 Mar 2009

publication

Transcriptional signatures of BALB/c mouse macrophages housing multiplying Leishmania amazonensis amastigotes

01 Jul 2008

publication

Interferon gamma-signature transcript profiling and IL-23 upregulation in response to Helicobacter pylori infection

21 Apr 2008

publication

Virulent Shigella flexneri subverts the host innate immune response through manipulation of antimicrobial peptide gene expression

01 Apr 2008

publication

AffyGCQC: a web-based interface to detect outlying genechips with extreme studentized deviate tests

01 Apr 2008

publication

Maturation of paneth cells induces the refractory state of newborn mice to Shigella infection

31 Mar 2008

publication

The LIM-only protein FHL2 regulates cyclin D1 expression and cell proliferation

01 Oct 2007

publication

Long oligonucleotide microarrays for African green monkey gene expression profile analysis.

03 Aug 2007

publication

Histone modifications induced by a family of bacterial toxins

30 Mar 2007

publication

Connexin30 deficiency causes instrastrial fluid-blood barrier disruption within the cochlear stria vascularis

01 Dec 2006

publication

The protein kinase IKKepsilon can inhibit HCV expression independently of IFN and its own expression is downregulated in HCV-infected livers

15 Jan 2006

publication

Anti-inflammatory effect of Lactobacillus casei on Shigella-infected human intestinal epithelial cells

01 Jun 2005

publication

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

01 Apr 2004

publication

International nomenclature for Corynebacterium diphtheriae ribotypes

01 Sep 2003

publication

Development and use of fluorescent 16S rRNA-targeted probes for the specific detection of Methylophaga species by in situ hybridization in marine sediments

01 Jan 2001

publication

Identification by in situ hybridization of segmented filamentous bacteria in the intestine of diarrheic rainbow trout (Oncorhynchus mykiss)

01 Nov 2000

publication

Exploring the frontier between life and death in Escherichia coli: evaluation of different viability markers in live and heat- or UV-killed cells

01 Sep 2000

publication

Oligonucleotide probe for the visualization of Escherichia coli/Escherichia fergusonii cells by in situ hybridization: specificity and potential applications

01 Jul 2000

publication

Streptococcus infantarius sp. nov., Streptococcus infantarius subsp. infantarius subsp. nov. and Streptococcus infantarius subsp. coli subsp. nov., isolated from humans and food

10 Apr 2000

publication

Problems associated with the direct viable count procedure applied to gram-positive bacteria

10 Apr 2000

publication

Cellular activities in ultra-violet killed Escherichia coli

01 Nov 1997

publication

Universal ribotyping method using a chemically labelled oligonucleotide probe mixture

01 Jan 1997

publication

Streptococcus infantarius sp. nov. related to Streptococcus bovis and Streptococcus equinus

01 Jun 1993

publication

Molecular typing of Chlamydia trachomatis by random amplification of polymorphic DNA

01 Oct 1992

publication

DNA fingerprinting of Chlamydia trachomatis by use of ribosomal RNA, oligonucleotide and randomly cloned DNA probes

01 Jan 1992

publication

Molecular typing of Brucella with cloned DNA probes

01 Feb 1990

publication

rRNA gene restriction patterns of Leptospira: a molecular typing system

01 Feb 1985

publication

A little guide for advanced search:

Performance of clinical metagenomics in France: a prospective observational study.

Genotype and Phenotype Characterization of Rhinolophus sp. Sarbecoviruses from Vietnam: Implications for Coronavirus Emergence.

Chronic Aichi Virus Infection As a Cause of Long-Lasting Multiorgan Involvement in Patients With Primary Immune Deficiencies.

Virus Pop—Expanding Viral Databases by Protein Sequence Simulation

SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19

Circovirus Hepatitis Infection in Heart-Lung Transplant Patient, France.

Microseek: A Metagenomic Pipeline for Virus Diagnostic and Discovery

Fetal Zika virus infection diagnosed by metagenomic next-generation sequencing in amniotic fluid.

Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery.

Bat coronaviruses related to SARS-CoV-2 and infectious for human cells.

First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1.

The virome of Rhipicephalus, Dermacentor and Haemaphysalis ticks from Eastern Romania includes novel viruses with potential relevance for public health.

Deep Impact of Random Amplification and Library Construction Methods on Viral Metagenomics Results

Transcriptome Profile During Rabies Virus Infection: Identification of Human CXCL16 as a Potential New Viral Target.

Pathogen discovery

Colorectal cancer specific conditions promote gut colonization

A bacteriocin from epidemic Listeria strains alters the host intestinal microbiota to favor infection (PNAS May 2nd, 2016)

Biomics

Meta-analysis of SHANK Mutations in Autism Spectrum Disorders: a gradient of severity in cognitive impairments.

Comparative analysis of resistant and susceptible macrophage gene expression response to Leishmania major parasite

MicroRNA expression profile in human macrophages in response to Leishmania major infection

Epithelial cell proliferation arrest induced by lactate and acetate from Lactobacillus casei and Bifidobacterium breve

Transcriptomic signature of Leishmania infected mice macrophages: a metabolic point of view

Genetic and functional analyses of SHANK2 mutations suggest a multiple hit model of autism spectrum disorders.

Genome-wide analysis of heteroduplex DNA in mismatch repair-deficient yeast cells reveals novel properties of meiotic recombination pathways

A bacterial protein targets the BAHD1 chromatin complex to stimulate type III interferon response

Early over expression of messenger RNA for multiple genes, including insulin, in the Pancreatic Lymph Nodes of NOD mice is associated with Islet Autoimmunity

Human BAHD1 promotes heterochromatic gene silencing

The Listeria transcriptional landscape from saprophytism to virulence.

Transcriptional signatures of BALB/c mouse macrophages housing multiplying Leishmania amazonensis amastigotes

Interferon gamma-signature transcript profiling and IL-23 upregulation in response to Helicobacter pylori infection

Virulent Shigella flexneri subverts the host innate immune response through manipulation of antimicrobial peptide gene expression

AffyGCQC: a web-based interface to detect outlying genechips with extreme studentized deviate tests

Maturation of paneth cells induces the refractory state of newborn mice to Shigella infection

The LIM-only protein FHL2 regulates cyclin D1 expression and cell proliferation

Long oligonucleotide microarrays for African green monkey gene expression profile analysis.

Histone modifications induced by a family of bacterial toxins

Connexin30 deficiency causes instrastrial fluid-blood barrier disruption within the cochlear stria vascularis

The protein kinase IKKepsilon can inhibit HCV expression independently of IFN and its own expression is downregulated in HCV-infected livers

Anti-inflammatory effect of Lactobacillus casei on Shigella-infected human intestinal epithelial cells

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

International nomenclature for Corynebacterium diphtheriae ribotypes

Development and use of fluorescent 16S rRNA-targeted probes for the specific detection of Methylophaga species by in situ hybridization in marine sediments

Identification by in situ hybridization of segmented filamentous bacteria in the intestine of diarrheic rainbow trout (Oncorhynchus mykiss)

Exploring the frontier between life and death in Escherichia coli: evaluation of different viability markers in live and heat- or UV-killed cells

Oligonucleotide probe for the visualization of Escherichia coli/Escherichia fergusonii cells by in situ hybridization: specificity and potential applications

Streptococcus infantarius sp. nov., Streptococcus infantarius subsp. infantarius subsp. nov. and Streptococcus infantarius subsp. coli subsp. nov., isolated from humans and food

Problems associated with the direct viable count procedure applied to gram-positive bacteria

Cellular activities in ultra-violet killed Escherichia coli

Universal ribotyping method using a chemically labelled oligonucleotide probe mixture

Streptococcus infantarius sp. nov. related to Streptococcus bovis and Streptococcus equinus

Molecular typing of Chlamydia trachomatis by random amplification of polymorphic DNA

DNA fingerprinting of Chlamydia trachomatis by use of ribosomal RNA, oligonucleotide and randomly cloned DNA probes

Molecular typing of Brucella with cloned DNA probes

rRNA gene restriction patterns of Leptospira: a molecular typing system

[Idiopathic massive preretinal hemorrhage. Etiopathogenic hypothesis. Prognosis]